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The map label for this gene is yrkE [H]

Identifier: 218233258

GI number: 218233258

Start: 805613

End: 806092

Strand: Direct

Name: yrkE [H]

Synonym: BCB4264_A0835

Alternate gene names: 218233258

Gene position: 805613-806092 (Clockwise)

Preceding gene: 218231139

Following gene: 218233696

Centisome position: 14.87

GC content: 35.42

Gene sequence:

>480_bases
ATGGAACAACAGAAGAAAACAACAATCGTTTTATTTAGCGGAGATTACGATAAAGCAATGGCTGCTTATATTATTGCAAA
TGGTGCAGCGGCGTATGATCAAGAGGTTACTATTTTTCATACTTTCTGGGGATTAAATGCTTTAAGGAAAGATGAACATG
TGAATGTAAAGAAAACATTTATAGAAAAAGTATTTGGAAAAATGATGCCACGCGGTGCTGATAAGATGGGGTTATCCAAA
ATGAATTTTGCTGGTATGGGACCAAAGATGATTAAAGGCATTATGAAAAAACATAATGCAATGCCTTTGCCAGATTTAAT
TGATTTGGCAAAAGAACAGGGGATTAAACTTGTAGCTTGTCAAATGACAGTAGATTTATTAGGGTTAAAAGAGGAAGAGA
TTATGGAAGGCGTAGAGTTTGCAGGTGTAGGGGCATATTTAGCAGATGCTTCGGATGGGAATGTAAACTTATTCATTTAA

Upstream 100 bases:

>100_bases
GGTAGGTGGTATGTTAGCTTGGGAAGGAAAAGTAGAATAGGGAGAAACAATTTTTTATAAATGAAAAAATACCCCTATAG
GTAATTGGAGGGAGAACAAT

Downstream 100 bases:

>100_bases
TCACCTTCTTTTTAGAAGGAGGGGGATGTAAGGTGAGTGGAGTATTATTACTTTTTATAATTGGGTTTATAGGATCGTTT
ATATCAGGAATGGTTGGAAT

Product: NADH dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEQQKKTTIVLFSGDYDKAMAAYIIANGAAAYDQEVTIFHTFWGLNALRKDEHVNVKKTFIEKVFGKMMPRGADKMGLSK
MNFAGMGPKMIKGIMKKHNAMPLPDLIDLAKEQGIKLVACQMTVDLLGLKEEEIMEGVEFAGVGAYLADASDGNVNLFI

Sequences:

>Translated_159_residues
MEQQKKTTIVLFSGDYDKAMAAYIIANGAAAYDQEVTIFHTFWGLNALRKDEHVNVKKTFIEKVFGKMMPRGADKMGLSK
MNFAGMGPKMIKGIMKKHNAMPLPDLIDLAKEQGIKLVACQMTVDLLGLKEEEIMEGVEFAGVGAYLADASDGNVNLFI
>Mature_159_residues
MEQQKKTTIVLFSGDYDKAMAAYIIANGAAAYDQEVTIFHTFWGLNALRKDEHVNVKKTFIEKVFGKMMPRGADKMGLSK
MNFAGMGPKMIKGIMKKHNAMPLPDLIDLAKEQGIKLVACQMTVDLLGLKEEEIMEGVEFAGVGAYLADASDGNVNLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 17524; Mature: 17524

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQKKTTIVLFSGDYDKAMAAYIIANGAAAYDQEVTIFHTFWGLNALRKDEHVNVKKTF
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHHH
IEKVFGKMMPRGADKMGLSKMNFAGMGPKMIKGIMKKHNAMPLPDLIDLAKEQGIKLVAC
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEE
QMTVDLLGLKEEEIMEGVEFAGVGAYLADASDGNVNLFI
EEEHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCEEEEC
>Mature Secondary Structure
MEQQKKTTIVLFSGDYDKAMAAYIIANGAAAYDQEVTIFHTFWGLNALRKDEHVNVKKTF
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHHH
IEKVFGKMMPRGADKMGLSKMNFAGMGPKMIKGIMKKHNAMPLPDLIDLAKEQGIKLVAC
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEE
QMTVDLLGLKEEEIMEGVEFAGVGAYLADASDGNVNLFI
EEEHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]