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The map label for this gene is ylbK [H]

Identifier: 218230835

GI number: 218230835

Start: 3951977

End: 3952768

Strand: Reverse

Name: ylbK [H]

Synonym: BCB4264_A4028

Alternate gene names: 218230835

Gene position: 3952768-3951977 (Counterclockwise)

Preceding gene: 218231719

Following gene: 218232817

Centisome position: 72.94

GC content: 38.01

Gene sequence:

>792_bases
ATGAAAGAACCAAAGATTGGTTTAGCACTTGGGTCTGGAGGAGCGAAAGGGTTTGCTCATATTGGTGTAATAAAGGTTTT
AAGGGAAGCGGGTATCCCTATTCACATGATTGCAGGAAGTAGTATGGGGGCGCTAATAGGTACGTTTTATGCGGCAAGTA
GTAACGTTGAAAGATTGTATAAATTGGCATCTGTTTTTAAGCGGAAGTATTATTTAGATTTCACGGTACCGAAAATGGGA
TTTATTGCTGGAAAACGTGTCAAAGATATGATTAAAATGTTTACATATAATAAAAATTTAGAAGAGTTAGATATCCCGAC
GGCTGTTGTGGCTACTGACATATTGAAGGGGGAAAAAGTGGTTTTTACAAGTGGGCCAGTTGCAGATGCGGTGAGGGCTA
GCATATCTGTTCCTGGAGTGTTTGTACCAGAAAAAATAGATGGAAGATTATTAGTGGATGGTGGAGTCATTGATCGCATC
CCAGTATCGGTTGTGAAAGAGTTAGGGGCCGATATTGTTATCGCTGTTGATGTATCTCCAATTAAGGTAAATGGCGATGT
TACGTCCATTTATGACGTAATCATGCAAAGTATTGAAATTATGCAGCATGAGCTTGTAATGAATCGGCAAATTGCATCGG
ATTTAATGATGCGACCAGCTGTAGAGCAATTTAGTTCACGTGCTTTTACAAACATTGAAGACATTATTCGAGTTGGAGAA
GTAGAAGCAGAAAAACATATTTCAAATATTTATTTATTAATTGAGCAGTGGAAGGAGAAACATAATGTTTAA

Upstream 100 bases:

>100_bases
CCTTTGTCCCAAAAAACGTTCATTTCAGTATACGTGGATACGTAGTGAATTTAGACCATAAGTATGAAAAAGGAATGAAA
AAAATTAAAGGGTGAGAAAA

Downstream 100 bases:

>100_bases
GCGTTTTCGGTTTATATATGCAATCTTAATAGGGGTTATATTGGCGATGTTACTTGTTTACGTACGTTTACCGTATTATA
TAACAAAACCAGGAATGGCT

Product: phospholipase, patatin family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKEPKIGLALGSGGAKGFAHIGVIKVLREAGIPIHMIAGSSMGALIGTFYAASSNVERLYKLASVFKRKYYLDFTVPKMG
FIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKELGADIVIAVDVSPIKVNGDVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIRVGE
VEAEKHISNIYLLIEQWKEKHNV

Sequences:

>Translated_263_residues
MKEPKIGLALGSGGAKGFAHIGVIKVLREAGIPIHMIAGSSMGALIGTFYAASSNVERLYKLASVFKRKYYLDFTVPKMG
FIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKELGADIVIAVDVSPIKVNGDVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIRVGE
VEAEKHISNIYLLIEQWKEKHNV
>Mature_263_residues
MKEPKIGLALGSGGAKGFAHIGVIKVLREAGIPIHMIAGSSMGALIGTFYAASSNVERLYKLASVFKRKYYLDFTVPKMG
FIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKELGADIVIAVDVSPIKVNGDVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIRVGE
VEAEKHISNIYLLIEQWKEKHNV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=269, Percent_Identity=30.8550185873606, Blast_Score=117, Evalue=7e-27,
Organism=Homo sapiens, GI148727290, Length=269, Percent_Identity=30.8550185873606, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656039, Length=181, Percent_Identity=35.9116022099448, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656041, Length=181, Percent_Identity=35.9116022099448, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI116256487, Length=181, Percent_Identity=35.9116022099448, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656043, Length=181, Percent_Identity=35.9116022099448, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656037, Length=181, Percent_Identity=35.9116022099448, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI226510936, Length=298, Percent_Identity=30.2013422818792, Blast_Score=140, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI71997299, Length=252, Percent_Identity=30.1587301587302, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71997289, Length=252, Percent_Identity=30.1587301587302, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193204778, Length=164, Percent_Identity=27.4390243902439, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323581, Length=268, Percent_Identity=24.6268656716418, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28571388, Length=282, Percent_Identity=29.7872340425532, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281376913, Length=282, Percent_Identity=30.1418439716312, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 28818; Mature: 28818

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPKIGLALGSGGAKGFAHIGVIKVLREAGIPIHMIAGSSMGALIGTFYAASSNVERLY
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHH
KLASVFKRKYYLDFTVPKMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKV
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCEE
VFTSGPVADAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKELGADIVIAVDVSP
EEECCCHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEEECCE
IKVNGDVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIRVGE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
VEAEKHISNIYLLIEQWKEKHNV
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEPKIGLALGSGGAKGFAHIGVIKVLREAGIPIHMIAGSSMGALIGTFYAASSNVERLY
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHH
KLASVFKRKYYLDFTVPKMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKV
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCEE
VFTSGPVADAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKELGADIVIAVDVSP
EEECCCHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEEECCE
IKVNGDVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIRVGE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
VEAEKHISNIYLLIEQWKEKHNV
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]