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The map label for this gene is ypmB [H]

Identifier: 218230833

GI number: 218230833

Start: 1526198

End: 1526701

Strand: Direct

Name: ypmB [H]

Synonym: BCB4264_A1600

Alternate gene names: 218230833

Gene position: 1526198-1526701 (Clockwise)

Preceding gene: 218231474

Following gene: 218231550

Centisome position: 28.16

GC content: 33.13

Gene sequence:

>504_bases
ATGAAAAAGTGGATCTTTGCAATCATTATTGTTATCGTTGCTAGCGGAATATATGGGGCGTATGTTTATAATAAAGCGAT
GGGAAAGAAAATTCCAAAAGAGTCGAAATTTGTAGAAATTGCTAAAGAAAAAGCAAAGCTTACAAAGGTGAAATCTGTTG
ATTATTACAACGGAAAATCTGCATATATAGTCGTGCAAGGTACAGATGAAAAGGGAGAACAACTTATCGTTTGGGTGCCT
GAGAAAAAAGGGGATACTGTAGTAAGGAAAAAGAGCGAAGGTATTTCTGAAAAAGAGGCTATACAAAGAACAATAGAGCA
AGTCGGCAATGAAAGTAAGGAATCAAAAAGTAAGCCGAAAGAGATTATGAAAGTGAAATTAGGCTTTGAAAATGATGTAC
CACTATGGGAAGTTACATATATTGATGATGACAATCGTTATAGTTATTACTATCTTGAATTTAAAGATGGAAAATTTTTA
AGACGATATAGCATTGAAAAATAG

Upstream 100 bases:

>100_bases
AATCGTACGTTAAAAGAGCAGGACCTCATGTTCGGACTAGCATTAGACGAAAAAGATAAAGAAACAGCTGTATTTACGAT
TTACAGAACGTAGTGATACA

Downstream 100 bases:

>100_bases
ATGTAGGGGGAACTACAAATGAAATTAGCAAAGCGAGTAGCTGCTTTAACACCGTCTTCAACTTTAGAAATTACAGCAAA
GGCACAAGCATTAAAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKWIFAIIIVIVASGIYGAYVYNKAMGKKIPKESKFVEIAKEKAKLTKVKSVDYYNGKSAYIVVQGTDEKGEQLIVWVP
EKKGDTVVRKKSEGISEKEAIQRTIEQVGNESKESKSKPKEIMKVKLGFENDVPLWEVTYIDDDNRYSYYYLEFKDGKFL
RRYSIEK

Sequences:

>Translated_167_residues
MKKWIFAIIIVIVASGIYGAYVYNKAMGKKIPKESKFVEIAKEKAKLTKVKSVDYYNGKSAYIVVQGTDEKGEQLIVWVP
EKKGDTVVRKKSEGISEKEAIQRTIEQVGNESKESKSKPKEIMKVKLGFENDVPLWEVTYIDDDNRYSYYYLEFKDGKFL
RRYSIEK
>Mature_167_residues
MKKWIFAIIIVIVASGIYGAYVYNKAMGKKIPKESKFVEIAKEKAKLTKVKSVDYYNGKSAYIVVQGTDEKGEQLIVWVP
EKKGDTVVRKKSEGISEKEAIQRTIEQVGNESKESKSKPKEIMKVKLGFENDVPLWEVTYIDDDNRYSYYYLEFKDGKFL
RRYSIEK

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 19357; Mature: 19357

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIFAIIIVIVASGIYGAYVYNKAMGKKIPKESKFVEIAKEKAKLTKVKSVDYYNGKS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECEEECCCE
AYIVVQGTDEKGEQLIVWVPEKKGDTVVRKKSEGISEKEAIQRTIEQVGNESKESKSKPK
EEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCH
EIMKVKLGFENDVPLWEVTYIDDDNRYSYYYLEFKDGKFLRRYSIEK
HEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCEEECCCCCC
>Mature Secondary Structure
MKKWIFAIIIVIVASGIYGAYVYNKAMGKKIPKESKFVEIAKEKAKLTKVKSVDYYNGKS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECEEECCCE
AYIVVQGTDEKGEQLIVWVPEKKGDTVVRKKSEGISEKEAIQRTIEQVGNESKESKSKPK
EEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCH
EIMKVKLGFENDVPLWEVTYIDDDNRYSYYYLEFKDGKFLRRYSIEK
HEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]