| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pepC [H]
Identifier: 213693269
GI number: 213693269
Start: 2717103
End: 2718614
Strand: Direct
Name: pepC [H]
Synonym: Blon_2423
Alternate gene names: 213693269
Gene position: 2717103-2718614 (Clockwise)
Preceding gene: 213693264
Following gene: 213693270
Centisome position: 95.92
GC content: 63.29
Gene sequence:
>1512_bases ATGACGACAGACGCCAGCGCACGGGCCATCAAACCCGAACTTCTGCGTACGTACACCGAAGACTTCAACAAGGACCGCGC CAACCTGATCGCGGCGGACGCGGCGGTTTCGGCCGGCGTGCTCAAGGCGGCCACCGACTATCGCGGCGTACGTGCGCTGC CGCGCGACTTCTCCATCGAACTCAAGCAGGGTTCGATCACCAATCAGGAGCGTTCCGGCCGTTGCTGGATGTTCGCCTCC CTGAACACGCTGCGTTACGAACTCATGCATCGCTGGAATCTTGAGGATTTCGAGTTCTCCGAGACCTACCTGTTCTTCTG GGACGCGATGGAGAAGTCGAACACTTATCTGGAGAACGTGCTGCGCACGCTCGACGAGGCGACCGATTCGCGTCTGTTCG AAGCCATCAACTGGGGCCCGTCCGACGACGGCGGCTGGTGGCAAATGTTCGCCGCCCTGGTGAACAAGTACGGCCTGGTG CCCAAGAGCGCCTACCCGGAGTCCGAGAACTCCCGTAATTCCGATGATTTCAAGCAGTACCTCAACTCCAAGCTGCGCGA GTTCGCAGCCGAGCTGCGCCGCCGTTCGGTTGCGGGCGCTGGCGAGGACGAGCTGCGCACGCTGAAGGACGAGTACATGG GCACCGTGTACCGCATCTGCGCCGTGTCGCTTGGCGAGCCGCCGGAGAAGTTCGACTTCTTCGCGCGCACCAAGGATGAT GATGAGGATAAGAAGGGCGAGGCCTGCAAGTGCAAGGCCGAGGCCGACGCAGACGGCAAGGCCGAATCCTGCAAGTGCGG CGACTCCTGCAAATGCGAGGGCAAATCCGACGCCAAGGCCTGCAAGTCCGACAAGCCGAAAACCGGCAAGGACGAGCGCC CGCAGATTCGCGAGATCGGCATCACCCCGCTTGAGTTCTACAAGAAGTACGTGCCGGTGGACGTCAACGATTTCGTGACG CTGGCCAACGCCCCGCTCAAGAACCGCCCGTTCAACCAGCGCTACCGCATCCGCTTCAGCGCGAACGTGGCCGAGGCTGG CGATATGGAATTCGTCAACGTGCCGCTGGACGTGTTCAAGAAGGCCGCGCTTGACCAGCTCACCGCCGGCCACCCGATCT GGCTCGCCTGCGACTGCACGCAGTTCGCGCTGCGCAAGGACGGTTTCTTCGACCAGTCCGTGGTGCGCGTCGACCAGCTG TTCGGCACCGAATTCACCGGCGACAAGGCCCACGGCCTCGAATACGGCGACAGCCCAAGCAACCACGCGATGACCTTCAC CGGCGTGAACCTCGGCGAGGACGGCAAGCCGAACCGCTGGAAGGTGGAGAACAGCTGGGGCAAGGACGCCGGCAAGGACG GCTACTACGTCATGTCCGACGCCTGGTTCGACCGTTACGTCACCGAGCTCATCATCCGCAAGGAATACCTCGACGACGCC ACCCGCGCCCTGCTCGCCGCCGAACCGGTCGAGCTCGACCCCTGGCAGCCCCTCACCCGCCGCTGCCGCTGA
Upstream 100 bases:
>100_bases TTATACTTCCGTGTCAGTAGTCCGCCGACTCGGATGGTGACAGTCCCCGCCGCCGGCAGCAGAATATCCATCAGCATCAT CAGCATCAGACAGGGGCATC
Downstream 100 bases:
>100_bases CATTCCGCTGGCGGGAGCATATATTGAATGCCCCTTCTCTCTGTTCAGAGAGAAGGGGCATTACGTTATGCGAGTACGTC CGGCCGCACCTATTCGAGAC
Product: Bleomycin hydrolase
Products: NA
Alternate protein names: Bleomycin hydrolase [H]
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MTTDASARAIKPELLRTYTEDFNKDRANLIAADAAVSAGVLKAATDYRGVRALPRDFSIELKQGSITNQERSGRCWMFAS LNTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENVLRTLDEATDSRLFEAINWGPSDDGGWWQMFAALVNKYGLV PKSAYPESENSRNSDDFKQYLNSKLREFAAELRRRSVAGAGEDELRTLKDEYMGTVYRICAVSLGEPPEKFDFFARTKDD DEDKKGEACKCKAEADADGKAESCKCGDSCKCEGKSDAKACKSDKPKTGKDERPQIREIGITPLEFYKKYVPVDVNDFVT LANAPLKNRPFNQRYRIRFSANVAEAGDMEFVNVPLDVFKKAALDQLTAGHPIWLACDCTQFALRKDGFFDQSVVRVDQL FGTEFTGDKAHGLEYGDSPSNHAMTFTGVNLGEDGKPNRWKVENSWGKDAGKDGYYVMSDAWFDRYVTELIIRKEYLDDA TRALLAAEPVELDPWQPLTRRCR
Sequences:
>Translated_503_residues MTTDASARAIKPELLRTYTEDFNKDRANLIAADAAVSAGVLKAATDYRGVRALPRDFSIELKQGSITNQERSGRCWMFAS LNTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENVLRTLDEATDSRLFEAINWGPSDDGGWWQMFAALVNKYGLV PKSAYPESENSRNSDDFKQYLNSKLREFAAELRRRSVAGAGEDELRTLKDEYMGTVYRICAVSLGEPPEKFDFFARTKDD DEDKKGEACKCKAEADADGKAESCKCGDSCKCEGKSDAKACKSDKPKTGKDERPQIREIGITPLEFYKKYVPVDVNDFVT LANAPLKNRPFNQRYRIRFSANVAEAGDMEFVNVPLDVFKKAALDQLTAGHPIWLACDCTQFALRKDGFFDQSVVRVDQL FGTEFTGDKAHGLEYGDSPSNHAMTFTGVNLGEDGKPNRWKVENSWGKDAGKDGYYVMSDAWFDRYVTELIIRKEYLDDA TRALLAAEPVELDPWQPLTRRCR >Mature_502_residues TTDASARAIKPELLRTYTEDFNKDRANLIAADAAVSAGVLKAATDYRGVRALPRDFSIELKQGSITNQERSGRCWMFASL NTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENVLRTLDEATDSRLFEAINWGPSDDGGWWQMFAALVNKYGLVP KSAYPESENSRNSDDFKQYLNSKLREFAAELRRRSVAGAGEDELRTLKDEYMGTVYRICAVSLGEPPEKFDFFARTKDDD EDKKGEACKCKAEADADGKAESCKCGDSCKCEGKSDAKACKSDKPKTGKDERPQIREIGITPLEFYKKYVPVDVNDFVTL ANAPLKNRPFNQRYRIRFSANVAEAGDMEFVNVPLDVFKKAALDQLTAGHPIWLACDCTQFALRKDGFFDQSVVRVDQLF GTEFTGDKAHGLEYGDSPSNHAMTFTGVNLGEDGKPNRWKVENSWGKDAGKDGYYVMSDAWFDRYVTELIIRKEYLDDAT RALLAAEPVELDPWQPLTRRCR
Specific function: Unknown
COG id: COG3579
COG function: function code E; Aminopeptidase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C1 family [H]
Homologues:
Organism=Homo sapiens, GI4557367, Length=502, Percent_Identity=30.0796812749004, Blast_Score=262, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6324090, Length=439, Percent_Identity=29.6127562642369, Blast_Score=204, Evalue=4e-53, Organism=Drosophila melanogaster, GI161077630, Length=416, Percent_Identity=29.0865384615385, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI161077632, Length=241, Percent_Identity=32.7800829875519, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24640588, Length=241, Percent_Identity=32.7800829875519, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI20130175, Length=436, Percent_Identity=25, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000169 - InterPro: IPR004134 [H]
Pfam domain/function: PF03051 Peptidase_C1_2 [H]
EC number: =3.4.22.40 [H]
Molecular weight: Translated: 57123; Mature: 56992
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDASARAIKPELLRTYTEDFNKDRANLIAADAAVSAGVLKAATDYRGVRALPRDFSIE CCCCCCCHHCCHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHCCCHHCCCCCCEEE LKQGSITNQERSGRCWMFASLNTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENV EECCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCHHHHHHH LRTLDEATDSRLFEAINWGPSDDGGWWQMFAALVNKYGLVPKSAYPESENSRNSDDFKQY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LNSKLREFAAELRRRSVAGAGEDELRTLKDEYMGTVYRICAVSLGEPPEKFDFFARTKDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DEDKKGEACKCKAEADADGKAESCKCGDSCKCEGKSDAKACKSDKPKTGKDERPQIREIG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCC ITPLEFYKKYVPVDVNDFVTLANAPLKNRPFNQRYRIRFSANVAEAGDMEFVNVPLDVFK CCHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCHHHHH KAALDQLTAGHPIWLACDCTQFALRKDGFFDQSVVRVDQLFGTEFTGDKAHGLEYGDSPS HHHHHHHCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NHAMTFTGVNLGEDGKPNRWKVENSWGKDAGKDGYYVMSDAWFDRYVTELIIRKEYLDDA CCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH TRALLAAEPVELDPWQPLTRRCR HHHHHHCCCCCCCCCCHHHHCCC >Mature Secondary Structure TTDASARAIKPELLRTYTEDFNKDRANLIAADAAVSAGVLKAATDYRGVRALPRDFSIE CCCCCCHHCCHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHCCCHHCCCCCCEEE LKQGSITNQERSGRCWMFASLNTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENV EECCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCHHHHHHH LRTLDEATDSRLFEAINWGPSDDGGWWQMFAALVNKYGLVPKSAYPESENSRNSDDFKQY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LNSKLREFAAELRRRSVAGAGEDELRTLKDEYMGTVYRICAVSLGEPPEKFDFFARTKDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DEDKKGEACKCKAEADADGKAESCKCGDSCKCEGKSDAKACKSDKPKTGKDERPQIREIG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCC ITPLEFYKKYVPVDVNDFVTLANAPLKNRPFNQRYRIRFSANVAEAGDMEFVNVPLDVFK CCHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCHHHHH KAALDQLTAGHPIWLACDCTQFALRKDGFFDQSVVRVDQLFGTEFTGDKAHGLEYGDSPS HHHHHHHCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NHAMTFTGVNLGEDGKPNRWKVENSWGKDAGKDGYYVMSDAWFDRYVTELIIRKEYLDDA CCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH TRALLAAEPVELDPWQPLTRRCR HHHHHHCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]