| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693252
Identifier: 213693252
GI number: 213693252
Start: 2690767
End: 2691837
Strand: Direct
Name: 213693252
Synonym: Blon_2406
Alternate gene names: NA
Gene position: 2690767-2691837 (Clockwise)
Preceding gene: 213693250
Following gene: 213693255
Centisome position: 94.99
GC content: 54.25
Gene sequence:
>1071_bases ATGAGATCATTCGACTACATCGAATCAGGTAAGACGTTGCTCACCCCGCACACCACGAGTTTGCTTGCCGCGATTCACGA GGCAAAAGGGCGCCAAAGCATACAGACAACGATCAGACCGGATATATTGGAGACGCTGGTTGCCGTCGCGCGCATCCAAA GCACAGATGCCTCAAACCGCATCGAAGGTATTTCTACCAGCGATAGCAGGCTCAACGATCTCGTCTCGGAGAAAGTCACA CCGCGCAATCGCAATGAAGAAGAGATTGCCGGCTACCGTGACGTGCTATCGGCTATTCACGAAAGCCACGACTATATTCC GGTTACCCCGAACGTCATTCTTCAACTGCACCGCGACCTCTTCCGGCACACACCACTGACCTTTGCGGGGCATTTCAAGG ACAGTGACAACGTCATCATCGAACGAGATGCACACGGGACCAGCACCGTGCGATTCGCCCCACCGTCCGCACTTGTCACA CCGGAACTGATCGAACGCGCGTGTTCCGCCTACACGCAAGCAATCCGAGATGGACATACCGATCCATTGCTTGCCGTCGC CATGTTCATTCTCGATTTCACCTGCATACATCCGTTCAATGACGGCAACGGCCGCATGAGTCGGCTACTCACGCTCCTGA TGTTGTACCGCAATGGCTATATGGTCGGCAAATACATCAGTATCGAACACCTTATCGAGCAAAGTAAAAGCACTTATTAT GAGGCGCTGGCCGCAAGCACCCAAGGATGGGACGACAACGCCAATGATTATGCGCCATTCACGAACTACCTGCTTGGCAT CATACTGTCCGCGTGCAAGGAATTCGACGAACGCATCAATCTCACGGCAGGCGGCAGAGCGCAGGGAGCACCGCGAGTAG TCACCAAGGGAACGCGGATTGAAGCACTGCTTGATCGATCCCTAGTTCCACTCTCCAAGGCCGATATTCTCGCTCGCATG CCCGATACCAGCACCACCACCATTGAGCGCACGCTGAAATCACTGTTGGACTCCGGTACGATCATCAAAATCGGTGCCGG TCGCAGCACCCGCTATATGAAACGCCGCTAA
Upstream 100 bases:
>100_bases CGCCATCCTGCCGCCTTTTCTGCCTCATCAACCCATTTTCTACCTCATTTTGATAAAATATGATGCAGAAAAGTTCGTAT GATGCAGAAAATGAGGCGGT
Downstream 100 bases:
>100_bases ACGCATCCTTGTGCGCAACATCTCGTCACTCTTCCGGCGCCCCGCTGGCCACGCGAATCATCGCGTACTGCGACTCGTAG AGGCGGTAGTACGCGCCCTT
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; AsnC Family Regulatory Protein; Fic Protein Family; Filamentation Induced By CAMP Family Protein; Regulation Factor CAMP; Homolog; Fic Family Protein; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Cell Filamentation Protein Fic; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRSFDYIESGKTLLTPHTTSLLAAIHEAKGRQSIQTTIRPDILETLVAVARIQSTDASNRIEGISTSDSRLNDLVSEKVT PRNRNEEEIAGYRDVLSAIHESHDYIPVTPNVILQLHRDLFRHTPLTFAGHFKDSDNVIIERDAHGTSTVRFAPPSALVT PELIERACSAYTQAIRDGHTDPLLAVAMFILDFTCIHPFNDGNGRMSRLLTLLMLYRNGYMVGKYISIEHLIEQSKSTYY EALAASTQGWDDNANDYAPFTNYLLGIILSACKEFDERINLTAGGRAQGAPRVVTKGTRIEALLDRSLVPLSKADILARM PDTSTTTIERTLKSLLDSGTIIKIGAGRSTRYMKRR
Sequences:
>Translated_356_residues MRSFDYIESGKTLLTPHTTSLLAAIHEAKGRQSIQTTIRPDILETLVAVARIQSTDASNRIEGISTSDSRLNDLVSEKVT PRNRNEEEIAGYRDVLSAIHESHDYIPVTPNVILQLHRDLFRHTPLTFAGHFKDSDNVIIERDAHGTSTVRFAPPSALVT PELIERACSAYTQAIRDGHTDPLLAVAMFILDFTCIHPFNDGNGRMSRLLTLLMLYRNGYMVGKYISIEHLIEQSKSTYY EALAASTQGWDDNANDYAPFTNYLLGIILSACKEFDERINLTAGGRAQGAPRVVTKGTRIEALLDRSLVPLSKADILARM PDTSTTTIERTLKSLLDSGTIIKIGAGRSTRYMKRR >Mature_356_residues MRSFDYIESGKTLLTPHTTSLLAAIHEAKGRQSIQTTIRPDILETLVAVARIQSTDASNRIEGISTSDSRLNDLVSEKVT PRNRNEEEIAGYRDVLSAIHESHDYIPVTPNVILQLHRDLFRHTPLTFAGHFKDSDNVIIERDAHGTSTVRFAPPSALVT PELIERACSAYTQAIRDGHTDPLLAVAMFILDFTCIHPFNDGNGRMSRLLTLLMLYRNGYMVGKYISIEHLIEQSKSTYY EALAASTQGWDDNANDYAPFTNYLLGIILSACKEFDERINLTAGGRAQGAPRVVTKGTRIEALLDRSLVPLSKADILARM PDTSTTTIERTLKSLLDSGTIIKIGAGRSTRYMKRR
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39621; Mature: 39621
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFDYIESGKTLLTPHTTSLLAAIHEAKGRQSIQTTIRPDILETLVAVARIQSTDASNR CCCCCHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC IEGISTSDSRLNDLVSEKVTPRNRNEEEIAGYRDVLSAIHESHDYIPVTPNVILQLHRDL CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH FRHTPLTFAGHFKDSDNVIIERDAHGTSTVRFAPPSALVTPELIERACSAYTQAIRDGHT HHCCCCEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC DPLLAVAMFILDFTCIHPFNDGNGRMSRLLTLLMLYRNGYMVGKYISIEHLIEQSKSTYY CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH EALAASTQGWDDNANDYAPFTNYLLGIILSACKEFDERINLTAGGRAQGAPRVVTKGTRI HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHH EALLDRSLVPLSKADILARMPDTSTTTIERTLKSLLDSGTIIKIGAGRSTRYMKRR HHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCC >Mature Secondary Structure MRSFDYIESGKTLLTPHTTSLLAAIHEAKGRQSIQTTIRPDILETLVAVARIQSTDASNR CCCCCHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC IEGISTSDSRLNDLVSEKVTPRNRNEEEIAGYRDVLSAIHESHDYIPVTPNVILQLHRDL CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH FRHTPLTFAGHFKDSDNVIIERDAHGTSTVRFAPPSALVTPELIERACSAYTQAIRDGHT HHCCCCEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC DPLLAVAMFILDFTCIHPFNDGNGRMSRLLTLLMLYRNGYMVGKYISIEHLIEQSKSTYY CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH EALAASTQGWDDNANDYAPFTNYLLGIILSACKEFDERINLTAGGRAQGAPRVVTKGTRI HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHH EALLDRSLVPLSKADILARMPDTSTTTIERTLKSLLDSGTIIKIGAGRSTRYMKRR HHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA