| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is nanE [H]
Identifier: 213693249
GI number: 213693249
Start: 2687697
End: 2688392
Strand: Direct
Name: nanE [H]
Synonym: Blon_2402
Alternate gene names: 213693249
Gene position: 2687697-2688392 (Clockwise)
Preceding gene: 213693248
Following gene: 213693250
Centisome position: 94.88
GC content: 56.32
Gene sequence:
>696_bases ATGAATACTAACGATACTTATTCGAAACGTCTTATTGATTCGCTCCACGGCACACTGATAGTCAGCTGTCAAGCATATCC CGGCGAGCCAATGCGGCATCCCGAAACCATGGCCCAAGTCGCTCAATCAGTAGTAATCGGCGGCGCTGCCGCCATTCGAT GCCAAGGTCTTGCCGATATCAGCGCCATCAAAGGCCAAGTAAAAGTTCCAGTCATCGGCATATGGAAGGAAGGCGATAAC GGCGTATACATCACGCCAACGTTACGCCACGCCAGAGCCTGCATTATGGCGGGAGCCGACATTGTGGCACTCGATGCTAC AGATCGGCCTCGGCCAGACGGTCTAACTCTGCAGCAGACCGCGCGGCAACTCAAAAGCGAGGGCGCAATACTGATGGCCG ACTGCGGCTGCATCGAAGACTCCGATGCAGCCGTGGATGCAGGATTCGACATCATCTCCACCACGCTGGCTGGATACACC GATTCCCGCGCCAAAACAGAAGGACCGGATTACGAGCTCCTCGCTCAAATGCTGGAGCGGCACCCCCACGTACCGGTGAT ATGCGAGGGTAGGATACATACTCCGTCCGATGCGGCCAAAGCCATAGAAATGGGTGCCTGGGCAGCCGTAGTCGGTACCG CCATCACCCACCCCATGACGATAACGTCATGGTTCGCCGATGCAGTAAGGTCCTGA
Upstream 100 bases:
>100_bases CGAACACCGGTTTTGACAGGAACACTCGGCGGCAGAGCCCCTCTCATCGGAGCAACATCAGCTCTGTGCGCCGACCTCAG ATCAAATAAGGAGCAGAAAT
Downstream 100 bases:
>100_bases TGGCGCACAAACCAACAGCGACCTAGGTAGGAGGCGATATGCAGTACGTTAAGGGCACCAATCAGGAACTATTGACCACA TCACCGCAGTTCCCTGCCCT
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNTNDTYSKRLIDSLHGTLIVSCQAYPGEPMRHPETMAQVAQSVVIGGAAAIRCQGLADISAIKGQVKVPVIGIWKEGDN GVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQTARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYT DSRAKTEGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAIEMGAWAAVVGTAITHPMTITSWFADAVRS
Sequences:
>Translated_231_residues MNTNDTYSKRLIDSLHGTLIVSCQAYPGEPMRHPETMAQVAQSVVIGGAAAIRCQGLADISAIKGQVKVPVIGIWKEGDN GVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQTARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYT DSRAKTEGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAIEMGAWAAVVGTAITHPMTITSWFADAVRS >Mature_231_residues MNTNDTYSKRLIDSLHGTLIVSCQAYPGEPMRHPETMAQVAQSVVIGGAAAIRCQGLADISAIKGQVKVPVIGIWKEGDN GVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQTARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYT DSRAKTEGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAIEMGAWAAVVGTAITHPMTITSWFADAVRS
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=218, Percent_Identity=40.3669724770642, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 24553; Mature: 24553
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNDTYSKRLIDSLHGTLIVSCQAYPGEPMRHPETMAQVAQSVVIGGAAAIRCQGLADI CCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCHHH SAIKGQVKVPVIGIWKEGDNGVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQT HHHCCEEECEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH ARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYTDSRAKTEGPDYELLAQMLER HHHHHHCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH HPHVPVICEGRIHTPSDAAKAIEMGAWAAVVGTAITHPMTITSWFADAVRS CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MNTNDTYSKRLIDSLHGTLIVSCQAYPGEPMRHPETMAQVAQSVVIGGAAAIRCQGLADI CCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCHHH SAIKGQVKVPVIGIWKEGDNGVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQT HHHCCEEECEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH ARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYTDSRAKTEGPDYELLAQMLER HHHHHHCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH HPHVPVICEGRIHTPSDAAKAIEMGAWAAVVGTAITHPMTITSWFADAVRS CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA