| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is malY [C]
Identifier: 213693170
GI number: 213693170
Start: 2578060
End: 2579313
Strand: Direct
Name: malY [C]
Synonym: Blon_2320
Alternate gene names: 213693170
Gene position: 2578060-2579313 (Clockwise)
Preceding gene: 213693169
Following gene: 213693172
Centisome position: 91.01
GC content: 61.0
Gene sequence:
>1254_bases ATGAGCATGAACAACATTCCCCAGTCAACGACTGTGAGCAACGCAACCGCCGGCGTCTCTTGCTTTGATGCCAATCACAT CGACGTGACGACCATCGAGGATCTGGAGCAGGTCGGTTCGGATAAATGGACCCGTTACCCCGGCTGCATCGGCGCATTCA TCGCCGAGATGGATTACGGTCTGGCACCGTGCGTGGCCGAAGCCATCGAAGAGGCCACTGAACGTGGCGCGCTCGGCTAC ATTCCCGACCCATGGAAGAAGGAGGTCGCCCGCTCGTGCGCCGCATGGCAGCGCCGCTACGGCTGGGAGGTGGATCCAAC GTGCATCCGCCCGGTGCCGGACGTGCTGGAGGCGTTCGAAGTGTTCCTGCGCGAGATCGTGCGCGCCGGTAACTCCATCG TGGTACCGACTCCGGCCTATATGCCGTTCCTAAGTGTGCCGCGTCTGTATGGCGTGGAGGTCCTTGAGATTCCGATGCTG TGCGCGGGCGCCGGCGAGAGCAGCGGGCGCAATGATGAATGGCTGTTCGATTTCGACGCCATTGAGCAGGCGTTCGCGAA CGGCTGCCATGCCTTCGTGCTGTGCAACCCGCACAACCCGATCGGCAAGGTATTGACGCGCGAGGAAATGCTGCGATTGT CCGATCTGGCCGCCAAGTACGACGTGCGTATATTCTCCGATGAGATTCACGCGCCGTTCGTCTACCAAGGCCACACGCAT GTGCCATTCGCCTCAATCAACCGGCAGACGGCCATGCAGGCTTTCACCTCCACTTCAGCCTCGAAGTCGTTCAACATTCC CGGCACCAAGTGCGCGCAGGTGATTCTCACCAATCCGGATGATCTGGAACTATGGATGAGGAACGCGGAATGGTCCGAGC ACCAGACGGCCACCATCGGTGCCATAGCCACCACTGCGGCCTATGACGGCGGCGCGGCATGGTTCGAGGGCGTGATGGCA TATATCGAGCGCAATATCGCGCTGGTCAACGAGCAGATGCGCACGAGATTCGCCAAGGTGCGCTATGTGGAGCCGCAGGG CACGTATATCGCGTGGCTGGATTTCTCGTCACTGGGCATCGATGACCCGGCCGACTATTTCTTCAAGAAGGCCAACGTGG CGTTGACAGACGGCCGTGAATGCGGCGAGGTCGGGCGCGGTTGCGTGCGTATGAACTTCGCCATGCCCTACCCGCTACTG GAGGAATGCTTCGACCGCATGGCCGCCGCGCTCGAGGCGGACGGGCTGTTGTAG
Upstream 100 bases:
>100_bases CAAGTAGTCGCACAGCGATAAGCAAGCTTGCGAGCGCCATCACGATTTCGGGGAGCCAGACCGTTGAGCGGCCCTTCTGC ACCGGGAACAATGGCATGTT
Downstream 100 bases:
>100_bases AACAAAATCGCGGCTCCCCTCAAAGAGGGGAGCCGAGGAACGGCCGAATTAGTCGAAGTCGGCGCCGAGGGCTTCGAGTT TGCCTCGGAAGTCGGCGTAG
Product: aminotransferase, class I and II
Products: NA
Alternate protein names: CBL; Beta-cystathionase; Cysteine lyase [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSMNNIPQSTTVSNATAGVSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYGLAPCVAEAIEEATERGALGY IPDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFEVFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPML CAGAGESSGRNDEWLFDFDAIEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTH VPFASINRQTAMQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIGAIATTAAYDGGAAWFEGVMA YIERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSSLGIDDPADYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLL EECFDRMAAALEADGLL
Sequences:
>Translated_417_residues MSMNNIPQSTTVSNATAGVSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYGLAPCVAEAIEEATERGALGY IPDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFEVFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPML CAGAGESSGRNDEWLFDFDAIEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTH VPFASINRQTAMQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIGAIATTAAYDGGAAWFEGVMA YIERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSSLGIDDPADYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLL EECFDRMAAALEADGLL >Mature_416_residues SMNNIPQSTTVSNATAGVSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYGLAPCVAEAIEEATERGALGYI PDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFEVFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPMLC AGAGESSGRNDEWLFDFDAIEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTHV PFASINRQTAMQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIGAIATTAAYDGGAAWFEGVMAY IERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSSLGIDDPADYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLLE ECFDRMAAALEADGLL
Specific function: Acts As A Beta-Cystathionase And As A Repressor Of The Maltose Regulon. [C]
COG id: COG1168
COG function: function code E; Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. MalY/PatB cystathionine beta-lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI56713256, Length=156, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI56713254, Length=156, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI95147551, Length=220, Percent_Identity=26.3636363636364, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI169881279, Length=220, Percent_Identity=26.3636363636364, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI169881281, Length=220, Percent_Identity=26.3636363636364, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1787909, Length=367, Percent_Identity=29.700272479564, Blast_Score=167, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322401, Length=255, Percent_Identity=27.4509803921569, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI28573069, Length=288, Percent_Identity=25.6944444444444, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24646114, Length=288, Percent_Identity=25.6944444444444, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28573067, Length=288, Percent_Identity=25.6944444444444, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28573065, Length=288, Percent_Identity=25.6944444444444, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =4.4.1.8 [H]
Molecular weight: Translated: 46188; Mature: 46056
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNNIPQSTTVSNATAGVSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYG CCCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCC LAPCVAEAIEEATERGALGYIPDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHH VFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPMLCAGAGESSGRNDEWLFDFDA HHHHHHHHCCCEEEECCCCCCHHHCCCHHHCCHHEECCHHEECCCCCCCCCCCEEEEHHH IEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTH HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEECCCCC VPFASINRQTAMQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIG CCHHHCCHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCCHHHHCCCCCCCCCCCEEHH AIATTAAYDGGAAWFEGVMAYIERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSSLGI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCC DDPADYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLLEECFDRMAAALEADGLL CCCHHHHHHHCCEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMNNIPQSTTVSNATAGVSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYG CCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCC LAPCVAEAIEEATERGALGYIPDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHH VFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPMLCAGAGESSGRNDEWLFDFDA HHHHHHHHCCCEEEECCCCCCHHHCCCHHHCCHHEECCHHEECCCCCCCCCCCEEEEHHH IEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTH HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEECCCCC VPFASINRQTAMQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIG CCHHHCCHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCCHHHHCCCCCCCCCCCEEHH AIATTAAYDGGAAWFEGVMAYIERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSSLGI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCC DDPADYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLLEECFDRMAAALEADGLL CCCHHHHHHHCCEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]