Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213693140

Identifier: 213693140

GI number: 213693140

Start: 2536621

End: 2537481

Strand: Direct

Name: 213693140

Synonym: Blon_2290

Alternate gene names: NA

Gene position: 2536621-2537481 (Clockwise)

Preceding gene: 213693139

Following gene: 213693154

Centisome position: 89.55

GC content: 64.23

Gene sequence:

>861_bases
ATGTCAGATTTTCTCGAACTTCTCGCTGCCGACGTTGCCGATTCGTCCGGTGCATCCGGTACGCCCAGTGCGCCCGATTC
ATCCGGTTCGACCGCACCCGGCATCGCCGCGACCAACCGCGTACGCACCGTGCTGTTCGAGTGCCTGTTCAATCATCTGG
CCGACGAACGAGTGGAGTCCTTGTTCACCATCCTCGGCTTCGAGCATGACTTCGATTGTTACGCCATCGCCGGATACCCT
GCCCGGTCCGCCGCACGTACGGCCAAGGAAATCGAGAAAATCGTGGCCGATTTCGGCGGTGTGTGTCTGACCGCCAAGCG
CCCGATCGGCAACAGCACCGCCGTAGTGGCGTTGATTCGTCCGGTCGGTGCGGCCACGCCAGAAATCATCTGCAATACCA
TAGCCCCGTCGTTCGCCGCCGATCGGCCAATCGCCTTGGGCCCGCAGCGCACCGGTGCCGATGGCGCGATGCGTTCGATT
CAGGCCACGCTCTACTGTCTTCAGGCCGCGCCGGCTCTGGCCGCCACCGTGCAGCCATTGCCGCGCCCGTTACGCACCGA
CGACGCCCTGCCCGAACGCGCGTTGATCGGCGACGCGGACGCCCGTGACGAACTGGTCCGCGTGGTCTACGGAAGCCTGA
CCGCAGCGGGCCCGGACGATCCGACGCTGCTCACCGTCTCCACATTCTTGAAGTTCGGTGGTTCGCTCGAAACCACGGCC
AAGGAACTCAACGTACATCCCAATACGATTCGCTACCGTTTGAAGCGCGCCGCCGAATCCACCGGCTGGGATGCCACCGA
CCCGCGCGAGGCGTACGTGCTGATCACCGCCATCGCGCTGGGTCGTGTGGCCGAAGCGTAG

Upstream 100 bases:

>100_bases
TGTTGCCGGTTGCGTTTGTATTCGGATTCGTGGTGCTGACGTATTGGCGAGAGTCTTTGGCTGAAAGGCAACGCCAATCA
GCGACGCTACACTAGTGACT

Downstream 100 bases:

>100_bases
TCGGGCAGAAGCATAACCAGCAGAACCGTAGCCGGCAAAGGCCATAGCTGACCGGACATAACCGTCCAGCCCGACAGCCT
AGCGGGCCGAATCAGGCTGC

Product: narrowly conserved hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSDFLELLAADVADSSGASGTPSAPDSSGSTAPGIAATNRVRTVLFECLFNHLADERVESLFTILGFEHDFDCYAIAGYP
ARSAARTAKEIEKIVADFGGVCLTAKRPIGNSTAVVALIRPVGAATPEIICNTIAPSFAADRPIALGPQRTGADGAMRSI
QATLYCLQAAPALAATVQPLPRPLRTDDALPERALIGDADARDELVRVVYGSLTAAGPDDPTLLTVSTFLKFGGSLETTA
KELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRVAEA

Sequences:

>Translated_286_residues
MSDFLELLAADVADSSGASGTPSAPDSSGSTAPGIAATNRVRTVLFECLFNHLADERVESLFTILGFEHDFDCYAIAGYP
ARSAARTAKEIEKIVADFGGVCLTAKRPIGNSTAVVALIRPVGAATPEIICNTIAPSFAADRPIALGPQRTGADGAMRSI
QATLYCLQAAPALAATVQPLPRPLRTDDALPERALIGDADARDELVRVVYGSLTAAGPDDPTLLTVSTFLKFGGSLETTA
KELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRVAEA
>Mature_285_residues
SDFLELLAADVADSSGASGTPSAPDSSGSTAPGIAATNRVRTVLFECLFNHLADERVESLFTILGFEHDFDCYAIAGYPA
RSAARTAKEIEKIVADFGGVCLTAKRPIGNSTAVVALIRPVGAATPEIICNTIAPSFAADRPIALGPQRTGADGAMRSIQ
ATLYCLQAAPALAATVQPLPRPLRTDDALPERALIGDADARDELVRVVYGSLTAAGPDDPTLLTVSTFLKFGGSLETTAK
ELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRVAEA

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30027; Mature: 29896

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFLELLAADVADSSGASGTPSAPDSSGSTAPGIAATNRVRTVLFECLFNHLADERVES
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFTILGFEHDFDCYAIAGYPARSAARTAKEIEKIVADFGGVCLTAKRPIGNSTAVVALIR
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEH
PVGAATPEIICNTIAPSFAADRPIALGPQRTGADGAMRSIQATLYCLQAAPALAATVQPL
HCCCCCHHHHHHHHCCCHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRPLRTDDALPERALIGDADARDELVRVVYGSLTAAGPDDPTLLTVSTFLKFGGSLETTA
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHH
KELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRVAEA
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFLELLAADVADSSGASGTPSAPDSSGSTAPGIAATNRVRTVLFECLFNHLADERVES
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFTILGFEHDFDCYAIAGYPARSAARTAKEIEKIVADFGGVCLTAKRPIGNSTAVVALIR
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEH
PVGAATPEIICNTIAPSFAADRPIALGPQRTGADGAMRSIQATLYCLQAAPALAATVQPL
HCCCCCHHHHHHHHCCCHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRPLRTDDALPERALIGDADARDELVRVVYGSLTAAGPDDPTLLTVSTFLKFGGSLETTA
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHH
KELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRVAEA
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]