Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213693154

Identifier: 213693154

GI number: 213693154

Start: 2557760

End: 2558626

Strand: Direct

Name: 213693154

Synonym: Blon_2304

Alternate gene names: NA

Gene position: 2557760-2558626 (Clockwise)

Preceding gene: 213693140

Following gene: 213693155

Centisome position: 90.29

GC content: 60.09

Gene sequence:

>867_bases
ATGCGAATCGGCGGGCCGTCCGCTCAGATGGTGCTCAACCGTTTCTCCTTCTTCGTATCAAGCCCGTGCCTGATGTTCGC
GATTCTCTCCAAGGAGCCGATCTTCGACATCTTCCACCCCTCGATTATCGTGGCGTTCTTCTCCGCCGTGCTGGTGGGCG
TGGTGTTCTTGGTGCTCAACCGCATGTTCTTCCACCTGAACGCCCCGGACGCCACCATCGGCGCCCTGAATTCGCTGTAC
CTTAATTCCAATAACATCGGCCTGCCAATCGCCACCTACATTCTGGGCAACCCGGCGCTGGTGGCACCGATTCTGGTCAT
GCAGCAGGCCATCTTCACACCGGTGGGCCTGACAGTGCTGGACGTGACCACCAAGGGCAAGGTCTCCATCAAGGAAATCG
CCAAGCAGCCACTGCATCAACCGCTGCTTATCGGCTCGCTGCTGGGCATTGTGGTCTCTGCGATTTCCGCTAAAAGCGGC
TGGTTCCCGGTGCCGAAATTCATTTTCGACCCAATCGACATGATCGGCGATTCGGCTGTGCCGATGATCCTGATGGCGTT
CGGCATGTCCCTGCACGGCACCAAGCCGCTGCAGCAGAAGGGCGATCGACCGGCCATCTTCACGGTCGCGGTCCTCAAGA
ACATCATCATGCCGATCATCGCGTTCCTGCTCGCCTACTTCGTGATGGGCTTCCGCGGCTCCGAGCTGTACGCCTGCGTG
GTGCTCGCCGCTCTGCCCACCGGCCAGAACGTGTACAACTACGCGGCCCGCTACAACGTGGGCCTCACCTTCGCGCGCGA
CGGCATTCTGATGAGCACCATGACCAGCCCGGTGTTTATCGCGATCATCGCGGCGCTGCTGAGCTGA

Upstream 100 bases:

>100_bases
TGGGGTGGCGAAAGGGAGGATTATGTCAGGTCTAATCAGCGCCATGCAAGGCTTCTGCGTTATCGGCATCGTGATTGCGG
TGGGATATGTCGCCGCACGA

Downstream 100 bases:

>100_bases
TCTCAGTCATCGGCATGGTAATCGGCGAGGTTCACACCGGCGGCCATGAGAATGCCCATGATCTCGCGACCGCTTGAAGC
GAATCCCCATGAAATCGAAG

Product: Auxin Efflux Carrier

Products: NA

Alternate protein names: Transport Integral Membrane Protein; Integral Membrane Permease; Permease; AEC Family Transporter; Malonate Transporter; Auxin Efflux Carrier Family Protein; Membrane Transport Family Protein; Transporter Permease; ABC Transport System Permease Protein; RHBT Family Transporter

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLNRMFFHLNAPDATIGALNSLY
LNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVLDVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSG
WFPVPKFIFDPIDMIGDSAVPMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACV
VLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS

Sequences:

>Translated_288_residues
MRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLNRMFFHLNAPDATIGALNSLY
LNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVLDVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSG
WFPVPKFIFDPIDMIGDSAVPMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACV
VLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS
>Mature_288_residues
MRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLNRMFFHLNAPDATIGALNSLY
LNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVLDVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSG
WFPVPKFIFDPIDMIGDSAVPMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACV
VLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31042; Mature: 31042

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLN
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RMFFHLNAPDATIGALNSLYLNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVL
HHHEECCCCCHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEE
DVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSGWFPVPKFIFDPIDMIGDSAV
EECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHCCCHH
PMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACV
HHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS
HHHHCCCCCHHHHHHHHHCCCEEEECCCEEHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLN
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RMFFHLNAPDATIGALNSLYLNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVL
HHHEECCCCCHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEE
DVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSGWFPVPKFIFDPIDMIGDSAV
EECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHCCCHH
PMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACV
HHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS
HHHHCCCCCHHHHHHHHHCCCEEEECCCEEHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA