Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213693112

Identifier: 213693112

GI number: 213693112

Start: 2496108

End: 2496734

Strand: Direct

Name: 213693112

Synonym: Blon_2262

Alternate gene names: NA

Gene position: 2496108-2496734 (Clockwise)

Preceding gene: 213693111

Following gene: 213693119

Centisome position: 88.12

GC content: 59.81

Gene sequence:

>627_bases
ATGGTGACCTTTTCGTTTATTAAGCCGCCTGCGCGCGGTTCATTGCGGCGACGGCGCATGGCGGATGCCTTGCGCCGACT
TACTGCTGCGTTGTGCGTGGGACTCGCAGTGTTGTTTGGGCTTGAAGCCGTATTGGCCGTGGTAGAGACCGAGCCGATGG
TGGTGGCCGCTCGTTCGATTCGACGGGGTGACATTATTCTGGCCGTCGACGTTCAGTTGGCTGCTATGCCGGTATCTGCG
ATAGGCCCGTCTTGGGCGGGCAATATTGAGGATGTGGTGGGCAAGGTGGCGCAAATCGATATCGAAGCAGCCGATCCCAT
TTCCACGCATATGGCCAGAGATGCGCCCGTAACACCGACCGGCACTACGGTGATTGAAGTCCGCTTGGCCAGTAGCGTCG
ACGATGTATTGGCCGGCGATCGGGTGAGACTGGTTTCCGCCGTCGGTTGCGAAGGTGCCGATTGCACGCTGGCCGAGAAT
GCCACGGTGATGAATGTCGGCAAACCGGATACGACTGGCGCATTGGGAGTCAACGACCGACTGGTGTCGTTCGCAATGCC
ACCGGAGGCCGCGGCCAAGGTTATGGAGCTGCAACAGGCCGGAGCGATTATGGCCGTTGTGCGCTAG

Upstream 100 bases:

>100_bases
TGTTGCACGGGTTTGAAGCGTTGTGGATAACTTGGCAAGCTAGAACCACATAGGTCGATTCAGCTTGCGCTTACGAAAAA
CTTCAGGTCATCATGGTTGC

Downstream 100 bases:

>100_bases
GAAGCGGAATCGGCCTTCGGCCGATGCTGTGTTTTCCTCAGCCGTAGGGCTGCGGAAAACACAGAGTTGGGGCGCACAGA
GTGCGCCCCAACTTCTACTC

Product: SAF domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MVTFSFIKPPARGSLRRRRMADALRRLTAALCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSA
IGPSWAGNIEDVVGKVAQIDIEAADPISTHMARDAPVTPTGTTVIEVRLASSVDDVLAGDRVRLVSAVGCEGADCTLAEN
ATVMNVGKPDTTGALGVNDRLVSFAMPPEAAAKVMELQQAGAIMAVVR

Sequences:

>Translated_208_residues
MVTFSFIKPPARGSLRRRRMADALRRLTAALCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSA
IGPSWAGNIEDVVGKVAQIDIEAADPISTHMARDAPVTPTGTTVIEVRLASSVDDVLAGDRVRLVSAVGCEGADCTLAEN
ATVMNVGKPDTTGALGVNDRLVSFAMPPEAAAKVMELQQAGAIMAVVR
>Mature_208_residues
MVTFSFIKPPARGSLRRRRMADALRRLTAALCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSA
IGPSWAGNIEDVVGKVAQIDIEAADPISTHMARDAPVTPTGTTVIEVRLASSVDDVLAGDRVRLVSAVGCEGADCTLAEN
ATVMNVGKPDTTGALGVNDRLVSFAMPPEAAAKVMELQQAGAIMAVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21657; Mature: 21657

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTFSFIKPPARGSLRRRRMADALRRLTAALCVGLAVLFGLEAVLAVVETEPMVVAARSI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHC
RRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKVAQIDIEAADPISTHMARDAPVTPT
CCCCEEEEEECEEEECCHHHCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCC
GTTVIEVRLASSVDDVLAGDRVRLVSAVGCEGADCTLAENATVMNVGKPDTTGALGVNDR
CCEEEEEEECCCHHHHHCCCCEEEEEECCCCCCCCEEECCCEEEECCCCCCCCCCCCCCC
LVSFAMPPEAAAKVMELQQAGAIMAVVR
EEEEECCHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MVTFSFIKPPARGSLRRRRMADALRRLTAALCVGLAVLFGLEAVLAVVETEPMVVAARSI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHC
RRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKVAQIDIEAADPISTHMARDAPVTPT
CCCCEEEEEECEEEECCHHHCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCC
GTTVIEVRLASSVDDVLAGDRVRLVSAVGCEGADCTLAENATVMNVGKPDTTGALGVNDR
CCEEEEEEECCCHHHHHCCCCEEEEEECCCCCCCCEEECCCEEEECCCCCCCCCCCCCCC
LVSFAMPPEAAAKVMELQQAGAIMAVVR
EEEEECCHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA