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The map label for this gene is araJ [H]

Identifier: 213693015

GI number: 213693015

Start: 2389850

End: 2391037

Strand: Direct

Name: araJ [H]

Synonym: Blon_2162

Alternate gene names: 213693015

Gene position: 2389850-2391037 (Clockwise)

Preceding gene: 213693012

Following gene: 213693016

Centisome position: 84.37

GC content: 60.1

Gene sequence:

>1188_bases
ATGAAGAAGAGTCTGCTTGCACTGGCTTCGGGCGCGTTCATTCTCGGTGCCGCCGAGTTCGTGATGATGGGCATTCTGCC
GCAGGCCGCGGCCGCCACCGGCGTGGACATCCCCACCGCAGGCCATTACATTTCCGCGTATGCGATCGGCGTGTGCTTCG
GCACGCTGATTCTGGTGTTCGGCCGCAAGGTGCCGCCGAAGAACCTCATCATATTGTTTATGGTGATTGCGCTTATCGGT
AATCTGGCCTCCGCGTTCTCGGTCAATGCCGCCACGCTGATTGTCGCGCGCTTCATTGCCGGCCTGCCGCACGGCGCATT
TTTCGGCACCGCCACACTCATCGCCAAAACCTTGGCCGACAAGGGCAAAGAAGCACAAGCCGTATCGGTAATGGTCACCG
GCCAAACCGTAGCCAATATGCTCGGCGTACCGGCGGGCACCTTGATGGCTGAGTTCCTATCCTGGCGCCTCGCATTCGGT
ATTCTGGCTGCATGGGCGGCAATGACCATCGTGCTAGTTCTGGCATGGATCCCCTTCGTTGCGCCGATTAAGGACGCCGG
CATCGCCGGTCAGTTCAAATTCCTTACTCGTCGTGGACCGTGGGTGATTCTGGCCGCCGTATTCACCGGCAACGCAGGCG
TGTTCTGCTGGTGGAGCTACGTCTCCCCCTGGCTGCAGAAGACCGGTGGCTGGTCGTCTAACCTGGTACCGCTATTGATG
ATGCTTGCCGGCTTCGGTATGGTGATAGGCGGTCTTATCGGCGGTCGCATCACAGATAAATGGCGCCACGCCGGCACTGC
CGCGCTGGGTCAGACGATTTCCTGCATCGGCTTGCTGATGGTTTTACTACTGCCGGGAAACCAGGGCACTACCGCTTTGC
TGACCTTCTGGATCGCCTTCGGACTGTTCTTCATCTCCGCTCCGCAACAGCTGCTGATGACCGAAGCCGGCCAAGGCGGC
GGCGAGCTCATCGCCGGCGCAGCCGTGCAGGTGGCCTTCAACTTCGGCAATGCCATCGGCTCGATTGTCGGCGGCGCGAT
GCTCACCACCTTCTCGATGAACTATCGCTATACCGGTCTGGGCGGTATGCCACTGGCTCTGCTTGCCGTAGGGCTGCTGG
CCTTCTACTCGTGGCGCTGCGAAACCGATACCGACGCCATTCACCGCATGCGCGAAATCCAAGTATGA

Upstream 100 bases:

>100_bases
GCAAGCCCCGTATTTGTTGGCGGACCACCGTAATATATCGCTCGAATCAATCGATTGCCGCACTGTTTTTGTAAGTAATA
CTGAAGTAGTTAGAGGAACC

Downstream 100 bases:

>100_bases
GACCGGACGTCACATTCACGCATAATCAGCGGAATGTGACGTTGCTCTCTTCTTACTGAAGTTCATCTGCGGTTCGTTTT
CATTACACACGTATTCCACC

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKKSLLALASGAFILGAAEFVMMGILPQAAAATGVDIPTAGHYISAYAIGVCFGTLILVFGRKVPPKNLIILFMVIALIG
NLASAFSVNAATLIVARFIAGLPHGAFFGTATLIAKTLADKGKEAQAVSVMVTGQTVANMLGVPAGTLMAEFLSWRLAFG
ILAAWAAMTIVLVLAWIPFVAPIKDAGIAGQFKFLTRRGPWVILAAVFTGNAGVFCWWSYVSPWLQKTGGWSSNLVPLLM
MLAGFGMVIGGLIGGRITDKWRHAGTAALGQTISCIGLLMVLLLPGNQGTTALLTFWIAFGLFFISAPQQLLMTEAGQGG
GELIAGAAVQVAFNFGNAIGSIVGGAMLTTFSMNYRYTGLGGMPLALLAVGLLAFYSWRCETDTDAIHRMREIQV

Sequences:

>Translated_395_residues
MKKSLLALASGAFILGAAEFVMMGILPQAAAATGVDIPTAGHYISAYAIGVCFGTLILVFGRKVPPKNLIILFMVIALIG
NLASAFSVNAATLIVARFIAGLPHGAFFGTATLIAKTLADKGKEAQAVSVMVTGQTVANMLGVPAGTLMAEFLSWRLAFG
ILAAWAAMTIVLVLAWIPFVAPIKDAGIAGQFKFLTRRGPWVILAAVFTGNAGVFCWWSYVSPWLQKTGGWSSNLVPLLM
MLAGFGMVIGGLIGGRITDKWRHAGTAALGQTISCIGLLMVLLLPGNQGTTALLTFWIAFGLFFISAPQQLLMTEAGQGG
GELIAGAAVQVAFNFGNAIGSIVGGAMLTTFSMNYRYTGLGGMPLALLAVGLLAFYSWRCETDTDAIHRMREIQV
>Mature_395_residues
MKKSLLALASGAFILGAAEFVMMGILPQAAAATGVDIPTAGHYISAYAIGVCFGTLILVFGRKVPPKNLIILFMVIALIG
NLASAFSVNAATLIVARFIAGLPHGAFFGTATLIAKTLADKGKEAQAVSVMVTGQTVANMLGVPAGTLMAEFLSWRLAFG
ILAAWAAMTIVLVLAWIPFVAPIKDAGIAGQFKFLTRRGPWVILAAVFTGNAGVFCWWSYVSPWLQKTGGWSSNLVPLLM
MLAGFGMVIGGLIGGRITDKWRHAGTAALGQTISCIGLLMVLLLPGNQGTTALLTFWIAFGLFFISAPQQLLMTEAGQGG
GELIAGAAVQVAFNFGNAIGSIVGGAMLTTFSMNYRYTGLGGMPLALLAVGLLAFYSWRCETDTDAIHRMREIQV

Specific function: May be involved in either the transport or processing of arabinose polymers [H]

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786595, Length=387, Percent_Identity=37.7260981912145, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1787947, Length=262, Percent_Identity=35.8778625954198, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787808, Length=265, Percent_Identity=25.6603773584906, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41446; Mature: 41446

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLALASGAFILGAAEFVMMGILPQAAAATGVDIPTAGHYISAYAIGVCFGTLILVF
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GRKVPPKNLIILFMVIALIGNLASAFSVNAATLIVARFIAGLPHGAFFGTATLIAKTLAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KGKEAQAVSVMVTGQTVANMLGVPAGTLMAEFLSWRLAFGILAAWAAMTIVLVLAWIPFV
CCCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIKDAGIAGQFKFLTRRGPWVILAAVFTGNAGVFCWWSYVSPWLQKTGGWSSNLVPLLM
HCCCCCCCCCHHHHEECCCCEEEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHH
MLAGFGMVIGGLIGGRITDKWRHAGTAALGQTISCIGLLMVLLLPGNQGTTALLTFWIAF
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GLFFISAPQQLLMTEAGQGGGELIAGAAVQVAFNFGNAIGSIVGGAMLTTFSMNYRYTGL
HHHHHHCCHHHHHHHCCCCCCHHHCCHHHEEEHHHHHHHHHHHHHHHHHHEECCEEEECC
GGMPLALLAVGLLAFYSWRCETDTDAIHRMREIQV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKSLLALASGAFILGAAEFVMMGILPQAAAATGVDIPTAGHYISAYAIGVCFGTLILVF
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GRKVPPKNLIILFMVIALIGNLASAFSVNAATLIVARFIAGLPHGAFFGTATLIAKTLAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KGKEAQAVSVMVTGQTVANMLGVPAGTLMAEFLSWRLAFGILAAWAAMTIVLVLAWIPFV
CCCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIKDAGIAGQFKFLTRRGPWVILAAVFTGNAGVFCWWSYVSPWLQKTGGWSSNLVPLLM
HCCCCCCCCCHHHHEECCCCEEEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHH
MLAGFGMVIGGLIGGRITDKWRHAGTAALGQTISCIGLLMVLLLPGNQGTTALLTFWIAF
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GLFFISAPQQLLMTEAGQGGGELIAGAAVQVAFNFGNAIGSIVGGAMLTTFSMNYRYTGL
HHHHHHCCHHHHHHHCCCCCCHHHCCHHHEEEHHHHHHHHHHHHHHHHHHEECCEEEECC
GGMPLALLAVGLLAFYSWRCETDTDAIHRMREIQV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744033; 9278503 [H]