| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693012
Identifier: 213693012
GI number: 213693012
Start: 2384733
End: 2385956
Strand: Direct
Name: 213693012
Synonym: Blon_2159
Alternate gene names: NA
Gene position: 2384733-2385956 (Clockwise)
Preceding gene: 213693011
Following gene: 213693015
Centisome position: 84.18
GC content: 57.92
Gene sequence:
>1224_bases ATGCAATCAGGCAGGGGAGGATTTATGATTAAGCAGGATACGTTGACCCGCAGGGCCGGTATCGCCTACTACGTAAGCAC CGCGTTCCTCATAGCGTCCAAGTCGTTCCCCCACGCCGTCCTGACCGTGCTGCTCCTGCACAAGGGTCTGGACCTCACCG AGATCATGTTCGTCCAGACGGCCTTCACCATAGCGGTGTTCCTCTTCGAGTTCCCCAGCGGCGTGATCTCCGACCTCTAC AGCCGGAAGATCATGTACCTGACATCCATCCTGGCGTGGGTAGCCGCATGCTCCGTCATCATCTTCGGAACCGGCTTCGC TATGATGTGCGTGGCCTGGGCGCTCTACGGCATCGGCGAGGCCCTGGCGTCGGGCACGGTCGACGCCTCGCTGATCAACC TCTACAAGCGGCTCTCCCCTGACCCGGACGAGGAGATCAAGACATTCAAACGCATCTCCAACCAGATATCCATGGTCTCC ATGATCATCGGCGCGATGCTCGGGTCCGCACTGTATTTCACGATCGGCTACAACATCTACGCCGTCGCGATGGCGCTTGC ATGCGCGGCGGCCCTGCCGATCATGCTCGCCTTCCCCAAGGACGAGCACGACGCCCGGGAGAAGAAGCCGACGATCATGT CCCAAGTGAGGGACGGACTGTCCGAACTCAGGAAGGACAGGCGGCTCACGTTCCTCATCGGCATGGCGGCCGTGAGCCAG ATCTTCTTCCAGACCCACTTCAACCTCTGGCAGGCCTACCTGCTCCTGATGGGAGTGAAAGACAAGTACCTGTTCGTGTT CTACCTGGTCTTCCAGGTCATAGGGATAGCCGCGTACGCGATTCACATAGACGGCCGTCTGAGGCGCCTCCTCTATCTTG GCATCCCGGTCGCCCTGATCATGCCCCTGCTAATCACGTCGGAATCACGGATCGTGTCGATCGGCGCATACTGCATCTCC GTGTTCATCTTCATGTTCCTGCAATACATGTGCGACGTGCTGTTCTCGATACGGGTCTCCGAGGAAAGAATCAGCACCCT GATCACCCTCAACTCGACGACCTGCAGGATCATCGGCTTCCTGGTGCTGGGACTCAACGGCCTGCTCCTGAAACAGATAA AACTCACCACCCTGATAGTGGGCTCCTTCGAGATCGCGACGTTCCTCTCCATCCTCCTCGGCCTGCTCTTCATGCTCAGT TTCTCAAAGAAAAAGAAGGAATAA
Upstream 100 bases:
>100_bases ACAGCTGTACAGAAAGATTATAAAGAGATTCATCGGGCATGATGCATGTATAAATGCTCGTGCTTGGCGTTGTCCTCTAC AGGTAAGATACTAGGGCCTC
Downstream 100 bases:
>100_bases TACGGGGCTGCGAACGTTTTAACTATACGGTTTTGTTGCCGCAATTATAGTGCGGCAACAAAACCGTATAGTTATTTGCC TTATAATCCCTTAATCTCTA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; MFS-Domain-Containing Protein; MccC-Like Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQSGRGGFMIKQDTLTRRAGIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQTAFTIAVFLFEFPSGVISDLY SRKIMYLTSILAWVAACSVIIFGTGFAMMCVAWALYGIGEALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVS MIIGAMLGSALYFTIGYNIYAVAMALACAAALPIMLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQ IFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALIMPLLITSESRIVSIGAYCIS VFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGFLVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLS FSKKKKE
Sequences:
>Translated_407_residues MQSGRGGFMIKQDTLTRRAGIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQTAFTIAVFLFEFPSGVISDLY SRKIMYLTSILAWVAACSVIIFGTGFAMMCVAWALYGIGEALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVS MIIGAMLGSALYFTIGYNIYAVAMALACAAALPIMLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQ IFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALIMPLLITSESRIVSIGAYCIS VFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGFLVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLS FSKKKKE >Mature_407_residues MQSGRGGFMIKQDTLTRRAGIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQTAFTIAVFLFEFPSGVISDLY SRKIMYLTSILAWVAACSVIIFGTGFAMMCVAWALYGIGEALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVS MIIGAMLGSALYFTIGYNIYAVAMALACAAALPIMLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQ IFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALIMPLLITSESRIVSIGAYCIS VFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGFLVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLS FSKKKKE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45373; Mature: 45373
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSGRGGFMIKQDTLTRRAGIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQT CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH AFTIAVFLFEFPSGVISDLYSRKIMYLTSILAWVAACSVIIFGTGFAMMCVAWALYGIGE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVSMIIGAMLGSALYFTIGYNIY HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAMALACAAALPIMLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQ HHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCHHHH MPLLITSESRIVSIGAYCISVFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCHHHHHHH LVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLSFSKKKKE HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSGRGGFMIKQDTLTRRAGIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQT CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH AFTIAVFLFEFPSGVISDLYSRKIMYLTSILAWVAACSVIIFGTGFAMMCVAWALYGIGE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVSMIIGAMLGSALYFTIGYNIY HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAMALACAAALPIMLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQ HHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCHHHH MPLLITSESRIVSIGAYCISVFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCHHHHHHH LVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLSFSKKKKE HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA