| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693011
Identifier: 213693011
GI number: 213693011
Start: 2383497
End: 2384411
Strand: Direct
Name: 213693011
Synonym: Blon_2158
Alternate gene names: NA
Gene position: 2383497-2384411 (Clockwise)
Preceding gene: 213693007
Following gene: 213693012
Centisome position: 84.14
GC content: 68.2
Gene sequence:
>915_bases GTGTTGACTTGTTCCATGAGCAAGAACAAGTCCTCGAGGGCGAGGAGGTGCCCGTTGTGCGGGCGCGCGATGCGCAGGAA CGGTTTCACGGGCGCCGGCTCGCAACGGTGGCGGTGCGACGGCTGTCGGTCGAGCTCCACGGCGAGGCGGGATGATTCGA GACGCATGGCGGAGTTCCGCGCGTTCCTCGCGTGGGTGACGGGCAAGGAGTCCATGGGCGAGGCCGCCGAACGGCGGTGG ATGGACGTGCCCGTGCAGCGCTGCCTGGTGCATGTGTTGCGCAACACCCGCGTCGACCTGACGAACAGGCCCAGGGGCGA GGCCGGCAGGGAGCTGCTCGGACTCGCCCGCAGGCTCGTCAGGGTGACGACGGCCGACGAGGCCGCCGCATGGCTCAAGG AGCTCAACGACTGGCACGGCAGGCACGACGATCACCTCAAGGAGCGCACTGTCGCCAAACAGGATCCCATGCACGCGAGG GGACGCAAGTGGTGGTGGACGCACGAACGCCTGCGCCGCGCCTACTTCCGATTGGTCAGGCTGAACCGGGCCGGCGTGCT GTTCGCGTTCTGCGATCCGGCCGTCCTCAAGGGCGGCGGCCCACTGCCGTCGGCGACCAACCAGCTGGAGGGCGGCGTCA ACGCCGTGGTCAAGCGCGCGCTCGACCACCACCGGGGATTGTCGGAGGAGCATATGAGACGCTGCCGCGAATGGGCGATC TACATGCTCACGGAGCAGCCCGACCCCATGGCGCTCGTCACGCCTGAACACTGGAGGATGAGGAAGGGGAAGCCGGCCGG GAATGACGGGCCCATGCCCGGCACCATGACGGCCGTGCAGGAACCGACCGACGGCGTCGACGCCTACGAGAGCGGGTTCG GGATCAGAAAGGGATGGGCCGGGCGATCAACCTGA
Upstream 100 bases:
>100_bases AAAAGTGTGTCTTAAATCCAGGGTGGGGCTTACTCCCGTCTTGCGTGTCGGGGTGTGATTAACGTTTCCGTCGTTAATTC GTCCGGGTGCTTGACTTTTC
Downstream 100 bases:
>100_bases CCATGACACGCGGGAATAGACACACTTTTCTTTACTTAACCCCATATGATTCCGTCCAAGTGTTTATCCGGTAATATCTG AACCAGTCGTGTTTCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase ; Transposase For Insertion Sequence; MULE Transposase Family Protein
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLTCSMSKNKSSRARRCPLCGRAMRRNGFTGAGSQRWRCDGCRSSSTARRDDSRRMAEFRAFLAWVTGKESMGEAAERRW MDVPVQRCLVHVLRNTRVDLTNRPRGEAGRELLGLARRLVRVTTADEAAAWLKELNDWHGRHDDHLKERTVAKQDPMHAR GRKWWWTHERLRRAYFRLVRLNRAGVLFAFCDPAVLKGGGPLPSATNQLEGGVNAVVKRALDHHRGLSEEHMRRCREWAI YMLTEQPDPMALVTPEHWRMRKGKPAGNDGPMPGTMTAVQEPTDGVDAYESGFGIRKGWAGRST
Sequences:
>Translated_304_residues MLTCSMSKNKSSRARRCPLCGRAMRRNGFTGAGSQRWRCDGCRSSSTARRDDSRRMAEFRAFLAWVTGKESMGEAAERRW MDVPVQRCLVHVLRNTRVDLTNRPRGEAGRELLGLARRLVRVTTADEAAAWLKELNDWHGRHDDHLKERTVAKQDPMHAR GRKWWWTHERLRRAYFRLVRLNRAGVLFAFCDPAVLKGGGPLPSATNQLEGGVNAVVKRALDHHRGLSEEHMRRCREWAI YMLTEQPDPMALVTPEHWRMRKGKPAGNDGPMPGTMTAVQEPTDGVDAYESGFGIRKGWAGRST >Mature_304_residues MLTCSMSKNKSSRARRCPLCGRAMRRNGFTGAGSQRWRCDGCRSSSTARRDDSRRMAEFRAFLAWVTGKESMGEAAERRW MDVPVQRCLVHVLRNTRVDLTNRPRGEAGRELLGLARRLVRVTTADEAAAWLKELNDWHGRHDDHLKERTVAKQDPMHAR GRKWWWTHERLRRAYFRLVRLNRAGVLFAFCDPAVLKGGGPLPSATNQLEGGVNAVVKRALDHHRGLSEEHMRRCREWAI YMLTEQPDPMALVTPEHWRMRKGKPAGNDGPMPGTMTAVQEPTDGVDAYESGFGIRKGWAGRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34614; Mature: 34614
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTCSMSKNKSSRARRCPLCGRAMRRNGFTGAGSQRWRCDGCRSSSTARRDDSRRMAEFR CEECCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH AFLAWVTGKESMGEAAERRWMDVPVQRCLVHVLRNTRVDLTNRPRGEAGRELLGLARRLV HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RVTTADEAAAWLKELNDWHGRHDDHLKERTVAKQDPMHARGRKWWWTHERLRRAYFRLVR HHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LNRAGVLFAFCDPAVLKGGGPLPSATNQLEGGVNAVVKRALDHHRGLSEEHMRRCREWAI HCCCCEEEEECCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEE YMLTEQPDPMALVTPEHWRMRKGKPAGNDGPMPGTMTAVQEPTDGVDAYESGFGIRKGWA EEEECCCCCEEEECCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCC GRST CCCC >Mature Secondary Structure MLTCSMSKNKSSRARRCPLCGRAMRRNGFTGAGSQRWRCDGCRSSSTARRDDSRRMAEFR CEECCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH AFLAWVTGKESMGEAAERRWMDVPVQRCLVHVLRNTRVDLTNRPRGEAGRELLGLARRLV HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RVTTADEAAAWLKELNDWHGRHDDHLKERTVAKQDPMHARGRKWWWTHERLRRAYFRLVR HHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LNRAGVLFAFCDPAVLKGGGPLPSATNQLEGGVNAVVKRALDHHRGLSEEHMRRCREWAI HCCCCEEEEECCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEE YMLTEQPDPMALVTPEHWRMRKGKPAGNDGPMPGTMTAVQEPTDGVDAYESGFGIRKGWA EEEECCCCCEEEECCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCC GRST CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA