| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692996
Identifier: 213692996
GI number: 213692996
Start: 2368828
End: 2369241
Strand: Direct
Name: 213692996
Synonym: Blon_2143
Alternate gene names: NA
Gene position: 2368828-2369241 (Clockwise)
Preceding gene: 213692992
Following gene: 213693001
Centisome position: 83.62
GC content: 60.39
Gene sequence:
>414_bases ATGGGTAAGCGACTGTGGGTTGAGCGCAACAAAGACGGTTCGTGGGATGCGTTCAGCGACGATGGCGCACACATTAAGTT CGGCAAGGATCGCGGCCAGTTCACGCCGGGCGATCTGATGAAGGTCGCGCTGGCCGGTTGCGCCGCGCTGTCCAGCCAGT TCGCCATCGAACATACGCTGGGTGAGGGCAAGGGTGCCAAGATTGTGGTGGATGGCACGTACGACCCTGAGAACGACGCC TACACCGGTTTCGAGGAGCAGGTGGTGATTGATGCTTCCGACGCCGGTCTGTCCGAGGAGGATGCCGACAAGCTCAAAGA GCGCGTCACCCGCCATATCGACAAGGGTTGCACGGTCAAGCACACCTACGTGCAGGAGACCCCGGTGCGCATGAACGTCA CTGTCAAGCACTGA
Upstream 100 bases:
>100_bases TAGAGAAGTCCAATGATGCGGGAGAGCGGCCAGGTGCCGCGCTCCCCCGCTGGCATGGCGATGGGCCAGATCGTCGGCGG CTGAAAATAAAGGAGCAGCT
Downstream 100 bases:
>100_bases AACGGGATATATACGGAAAGAGGCTCCCGCTGGCGGGAGCCTCTTTCCGTATATTCGGACTTTACTGGCGATCGGGATCG ATGGTCTTCTCGATCTGCTG
Product: OsmC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDA YTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH
Sequences:
>Translated_137_residues MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDA YTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH >Mature_136_residues GKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTLGEGKGAKIVVDGTYDPENDAY TGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVKHTYVQETPVRMNVTVKH
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 15057; Mature: 14926
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTL CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC GEGKGAKIVVDGTYDPENDAYTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVK CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE HTYVQETPVRMNVTVKH EEEECCCCEEEEEEEEC >Mature Secondary Structure GKRLWVERNKDGSWDAFSDDGAHIKFGKDRGQFTPGDLMKVALAGCAALSSQFAIEHTL CCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC GEGKGAKIVVDGTYDPENDAYTGFEEQVVIDASDAGLSEEDADKLKERVTRHIDKGCTVK CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE HTYVQETPVRMNVTVKH EEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]