| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692964
Identifier: 213692964
GI number: 213692964
Start: 2330773
End: 2331591
Strand: Reverse
Name: 213692964
Synonym: Blon_2110
Alternate gene names: NA
Gene position: 2331591-2330773 (Counterclockwise)
Preceding gene: 213692966
Following gene: 213692963
Centisome position: 82.31
GC content: 52.99
Gene sequence:
>819_bases ATGACAACGGGTGTGAATCAGGAGATTGTCGTTGCCGTAGTGTCGCATAAGCCATATCGCATGCCGGCTGATTCGGTATA TATGCCACTGCATGTGGGCGCCGCGCTGCATCCGGATGTGTTGCCCGATTGGGTTCAGGACAACGAGGGTGAGAATATCT CGGATCGCAATGGCAAGTATTCGGAGCTGACCGGCCTGTATTGGTTGTGGAAGAACTGCGATGCCGATTACATCGGTTTG GTGCACTACCGCAGGCATTTCGCTACTCGCAGTTGGCTGGGGCGTCGAGCCCGCGATCGTTTTGACAGGATCATCGGCGG TCAGGAACTTGCTCAGGTGCTGCAAAAGGCGGATGTAGTAGTGCCAAACCATCGTAATTACGTAATTGAAACGGTCCGTT CGCATTATGAGCACACATTGCCGGCTGAGCATCTCGATGTTACGCGGGACGTTATTCGGGAACGCTACCCGCAGTATCTT GCCACGTTCGACAAGGTGATGGGTGGAACAAAGGCTCATATGTTCAATATGTTCATAATGCGTCGAGATCTGCTTGCCGA TTACTGTGCCTGGCTGTTTCCAATTCTGTTCGAGCTTGAACAGCGCACTGACGATTCAGCCTATGACGCTTTCAACCTGC GGTACCCAGGACGTGTTTCAGAGACGCTGCTGGATGTATGGCTTTCCGAGCAGCTGCAGCAAGGTGTCCGGATGGTTGAG CTTCCCGTTGCGTCGCCCGAACCGGTCGATTGGCCTGCTAAGATCATGGGATTCCTTAACGCCAAGTTCCGTGGCAAGAA ATATGGGAAGAGTTTCTGA
Upstream 100 bases:
>100_bases CATAGGTGCAACATCCCTTCGGACTGGTTTTCTGGACAATCTCCAATCTAACGGATGTTGCACTTTCAATTAGACAACGG GTGAAAGGTAGGATAACAAT
Downstream 100 bases:
>100_bases TAAATTGGGAATGCTGTTTGGCTTGTATAGTTTTGCTTTTGGATGCTTTTTGGCCCCCTATAGTCCAAGAGCTAGCTTTC TATGCAGCGCGCATATGATA
Product: glycosyltransferase
Products: NA
Alternate protein names: Capsular Biosynthesis Protein; Exopolysaccharide Biosynthesis Protein; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyl Transferase; Galactosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Alpha-1 3-Galactosyltransferase; Family 8 Glycosyl Transferase; EpsIH Glycosyltransferase; Sugar Transferase; Polysachharide Biosynthesis Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTTGVNQEIVVAVVSHKPYRMPADSVYMPLHVGAALHPDVLPDWVQDNEGENISDRNGKYSELTGLYWLWKNCDADYIGL VHYRRHFATRSWLGRRARDRFDRIIGGQELAQVLQKADVVVPNHRNYVIETVRSHYEHTLPAEHLDVTRDVIRERYPQYL ATFDKVMGGTKAHMFNMFIMRRDLLADYCAWLFPILFELEQRTDDSAYDAFNLRYPGRVSETLLDVWLSEQLQQGVRMVE LPVASPEPVDWPAKIMGFLNAKFRGKKYGKSF
Sequences:
>Translated_272_residues MTTGVNQEIVVAVVSHKPYRMPADSVYMPLHVGAALHPDVLPDWVQDNEGENISDRNGKYSELTGLYWLWKNCDADYIGL VHYRRHFATRSWLGRRARDRFDRIIGGQELAQVLQKADVVVPNHRNYVIETVRSHYEHTLPAEHLDVTRDVIRERYPQYL ATFDKVMGGTKAHMFNMFIMRRDLLADYCAWLFPILFELEQRTDDSAYDAFNLRYPGRVSETLLDVWLSEQLQQGVRMVE LPVASPEPVDWPAKIMGFLNAKFRGKKYGKSF >Mature_271_residues TTGVNQEIVVAVVSHKPYRMPADSVYMPLHVGAALHPDVLPDWVQDNEGENISDRNGKYSELTGLYWLWKNCDADYIGLV HYRRHFATRSWLGRRARDRFDRIIGGQELAQVLQKADVVVPNHRNYVIETVRSHYEHTLPAEHLDVTRDVIRERYPQYLA TFDKVMGGTKAHMFNMFIMRRDLLADYCAWLFPILFELEQRTDDSAYDAFNLRYPGRVSETLLDVWLSEQLQQGVRMVEL PVASPEPVDWPAKIMGFLNAKFRGKKYGKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31622; Mature: 31491
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGVNQEIVVAVVSHKPYRMPADSVYMPLHVGAALHPDVLPDWVQDNEGENISDRNGKY CCCCCCCEEEEEEECCCCCCCCCCCEEEHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCH SELTGLYWLWKNCDADYIGLVHYRRHFATRSWLGRRARDRFDRIIGGQELAQVLQKADVV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEE VPNHRNYVIETVRSHYEHTLPAEHLDVTRDVIRERYPQYLATFDKVMGGTKAHMFNMFIM CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRDLLADYCAWLFPILFELEQRTDDSAYDAFNLRYPGRVSETLLDVWLSEQLQQGVRMVE HHHHHHHHHHHHHHHHHHHHHCCCCCHHCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE LPVASPEPVDWPAKIMGFLNAKFRGKKYGKSF ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTGVNQEIVVAVVSHKPYRMPADSVYMPLHVGAALHPDVLPDWVQDNEGENISDRNGKY CCCCCCEEEEEEECCCCCCCCCCCEEEHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCH SELTGLYWLWKNCDADYIGLVHYRRHFATRSWLGRRARDRFDRIIGGQELAQVLQKADVV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEE VPNHRNYVIETVRSHYEHTLPAEHLDVTRDVIRERYPQYLATFDKVMGGTKAHMFNMFIM CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRDLLADYCAWLFPILFELEQRTDDSAYDAFNLRYPGRVSETLLDVWLSEQLQQGVRMVE HHHHHHHHHHHHHHHHHHHHHCCCCCHHCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE LPVASPEPVDWPAKIMGFLNAKFRGKKYGKSF ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA