Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is epsJ [H]

Identifier: 213692963

GI number: 213692963

Start: 2329534

End: 2330628

Strand: Reverse

Name: epsJ [H]

Synonym: Blon_2109

Alternate gene names: 213692963

Gene position: 2330628-2329534 (Counterclockwise)

Preceding gene: 213692964

Following gene: 213692962

Centisome position: 82.27

GC content: 40.0

Gene sequence:

>1095_bases
ATGAAAGACAAAAAATTGGCTAATATTGTTCCACAAAATCAGGAAGATGAGGGAATTATTCTCTCTATTATCGTTCCCAC
ATGGAATATTCCCTCAGAGATTTTCAAACGTTGTATGAACAGTATTGCCAATCTTAAAAATCTTTCCTATGAAGTGTTGA
TTATGATTGACGGGGATGGCCAACACGATCGTTATTGGGCAATATGCCAGGAGTGTTTTTCTTCGCCGGAGAGAGTGAAA
GTAATCGAAATAGCACATGCTGGGCTAAATGCTGTTAGGAATGCGGGCATCAAACTCTCTCAGGGGAAATGGCTTTTCAT
TGTAGATGCGGATGACGCTATCTGTGTCGAGGGTTTGACATTGGCGTTGAATGCGCTAAAAGGTGCATCAGATACGGTGG
CGTACTGCACAAACCATATCGAGGTATTCAGATCATACAGTAAACGTATGATGAATTATTGTGAAGATGAGCGCTTTAAT
GGTGTAGAGTGCTGTTCGCGCTTGATGCGGTGTACGTATAACATGGGGCAAGCTTGGGCAAAGCTTTTTTCTCGGGATTT
TCTAATTACTAATCATTTGTATTATGATGAGAGTCTTGCTTTCGGTGAAGATTGTGAATTTATTCTACGTTTGGCTTTTA
AGGCAGAACAAAACAATGTCACTTTCATGGGGTCTCCGGTATTTAGTTATCAGTATTATCGCAATGCAGATTCATCAACG
AAACGCTTTTCTGAAGATTATATGAATCGATATATTCGTGCATTTAAAATAATGAATCAGGATTTTAAAGAAGCGAAGTG
GGAACCCAAAGAGTTTGACATTTTTGTAGCGCATGTTCTCATGCAATTAACTGTCAATTATGTGTTTAATGCAAATGCGG
GAATGACTTTAAAAGATCATTGGCATTTGTATCGTAAGGTTCGTCAGATTGATGAATTTGCGTGTGCAATAAGAAATGTG
CATTGCGCGCAGATGAATTCCAAGAGTCGTTCCATAGTGCTTATGTTTTGGAAACTGCACTTATTTCTCTGCTTGTATGT
GGTCGCTTGGTTTAGGCACACGCAGATTCGTCTAGGAAGGAAGCGGTGGGCGTGA

Upstream 100 bases:

>100_bases
GCTTTTTGGCCCCCTATAGTCCAAGAGCTAGCTTTCTATGCAGCGCGCATATGATAAAATGCAATACAAAAGTATCGGTA
TATAAGGCGGAAAGTGACAT

Downstream 100 bases:

>100_bases
CGTTATTAGCAGTAGTGTTTCTAGATTGATCCCTTAAAATAGATGAATTAGTTGATTTATATGTTTCAAATATTATTTTA
TCCGCTTGTATTCGCTATCT

Product: glycosyl transferase, family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK
VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN
GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST
KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV
HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA

Sequences:

>Translated_364_residues
MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK
VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN
GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST
KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV
HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA
>Mature_364_residues
MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK
VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN
GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST
KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV
HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42595; Mature: 42595

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDG
CCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
QHDRYWAICQECFSSPERVKVIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLT
CCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHH
LALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFNGVECCSRLMRCTYNMGQAWA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST
HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCCHH
KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDH
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH
WHLYRKVRQIDEFACAIRNVHCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGR
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KRWA
HCCC
>Mature Secondary Structure
MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDG
CCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
QHDRYWAICQECFSSPERVKVIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLT
CCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHH
LALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFNGVECCSRLMRCTYNMGQAWA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST
HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCCHH
KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDH
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH
WHLYRKVRQIDEFACAIRNVHCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGR
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KRWA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]