| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is epsJ [H]
Identifier: 213692963
GI number: 213692963
Start: 2329534
End: 2330628
Strand: Reverse
Name: epsJ [H]
Synonym: Blon_2109
Alternate gene names: 213692963
Gene position: 2330628-2329534 (Counterclockwise)
Preceding gene: 213692964
Following gene: 213692962
Centisome position: 82.27
GC content: 40.0
Gene sequence:
>1095_bases ATGAAAGACAAAAAATTGGCTAATATTGTTCCACAAAATCAGGAAGATGAGGGAATTATTCTCTCTATTATCGTTCCCAC ATGGAATATTCCCTCAGAGATTTTCAAACGTTGTATGAACAGTATTGCCAATCTTAAAAATCTTTCCTATGAAGTGTTGA TTATGATTGACGGGGATGGCCAACACGATCGTTATTGGGCAATATGCCAGGAGTGTTTTTCTTCGCCGGAGAGAGTGAAA GTAATCGAAATAGCACATGCTGGGCTAAATGCTGTTAGGAATGCGGGCATCAAACTCTCTCAGGGGAAATGGCTTTTCAT TGTAGATGCGGATGACGCTATCTGTGTCGAGGGTTTGACATTGGCGTTGAATGCGCTAAAAGGTGCATCAGATACGGTGG CGTACTGCACAAACCATATCGAGGTATTCAGATCATACAGTAAACGTATGATGAATTATTGTGAAGATGAGCGCTTTAAT GGTGTAGAGTGCTGTTCGCGCTTGATGCGGTGTACGTATAACATGGGGCAAGCTTGGGCAAAGCTTTTTTCTCGGGATTT TCTAATTACTAATCATTTGTATTATGATGAGAGTCTTGCTTTCGGTGAAGATTGTGAATTTATTCTACGTTTGGCTTTTA AGGCAGAACAAAACAATGTCACTTTCATGGGGTCTCCGGTATTTAGTTATCAGTATTATCGCAATGCAGATTCATCAACG AAACGCTTTTCTGAAGATTATATGAATCGATATATTCGTGCATTTAAAATAATGAATCAGGATTTTAAAGAAGCGAAGTG GGAACCCAAAGAGTTTGACATTTTTGTAGCGCATGTTCTCATGCAATTAACTGTCAATTATGTGTTTAATGCAAATGCGG GAATGACTTTAAAAGATCATTGGCATTTGTATCGTAAGGTTCGTCAGATTGATGAATTTGCGTGTGCAATAAGAAATGTG CATTGCGCGCAGATGAATTCCAAGAGTCGTTCCATAGTGCTTATGTTTTGGAAACTGCACTTATTTCTCTGCTTGTATGT GGTCGCTTGGTTTAGGCACACGCAGATTCGTCTAGGAAGGAAGCGGTGGGCGTGA
Upstream 100 bases:
>100_bases GCTTTTTGGCCCCCTATAGTCCAAGAGCTAGCTTTCTATGCAGCGCGCATATGATAAAATGCAATACAAAAGTATCGGTA TATAAGGCGGAAAGTGACAT
Downstream 100 bases:
>100_bases CGTTATTAGCAGTAGTGTTTCTAGATTGATCCCTTAAAATAGATGAATTAGTTGATTTATATGTTTCAAATATTATTTTA TCCGCTTGTATTCGCTATCT
Product: glycosyl transferase, family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA
Sequences:
>Translated_364_residues MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA >Mature_364_residues MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDGQHDRYWAICQECFSSPERVK VIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLTLALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFN GVECCSRLMRCTYNMGQAWAKLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDHWHLYRKVRQIDEFACAIRNV HCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGRKRWA
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42595; Mature: 42595
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDG CCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC QHDRYWAICQECFSSPERVKVIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLT CCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHH LALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFNGVECCSRLMRCTYNMGQAWA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCCHH KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDH HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH WHLYRKVRQIDEFACAIRNVHCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGR HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KRWA HCCC >Mature Secondary Structure MKDKKLANIVPQNQEDEGIILSIIVPTWNIPSEIFKRCMNSIANLKNLSYEVLIMIDGDG CCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC QHDRYWAICQECFSSPERVKVIEIAHAGLNAVRNAGIKLSQGKWLFIVDADDAICVEGLT CCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHH LALNALKGASDTVAYCTNHIEVFRSYSKRMMNYCEDERFNGVECCSRLMRCTYNMGQAWA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KLFSRDFLITNHLYYDESLAFGEDCEFILRLAFKAEQNNVTFMGSPVFSYQYYRNADSST HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCCHH KRFSEDYMNRYIRAFKIMNQDFKEAKWEPKEFDIFVAHVLMQLTVNYVFNANAGMTLKDH HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH WHLYRKVRQIDEFACAIRNVHCAQMNSKSRSIVLMFWKLHLFLCLYVVAWFRHTQIRLGR HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KRWA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]