| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692959
Identifier: 213692959
GI number: 213692959
Start: 2325190
End: 2326143
Strand: Reverse
Name: 213692959
Synonym: Blon_2105
Alternate gene names: NA
Gene position: 2326143-2325190 (Counterclockwise)
Preceding gene: 213692960
Following gene: 213692958
Centisome position: 82.12
GC content: 44.13
Gene sequence:
>954_bases ATGTATGAGGGGACACTGAGCATGGCAGTTCAATCATTGGGTCAGGCAGTTAATTATTGTAAGCGTTTTGGTCCAAGACT TGTTGCTACGAAAATGCTGTATAAGCTGTTACCGCAGGCTGGCTTTTCTGTATGTAGACAGATAGAAGAGTATCTGAAAC ATTATTATCTTCCGGATGTTGCCTACCATAAAACTGAGTTTTGTGGAAAAATTCAAGCTGATGCACCAATCTGGGTGATG TGGTGGCAAGGTGAGGAACGGATGCCTGATGTTGTGCGTTTGGCGGTCGCTTCCATGCGTAGGTTTGCAGGCCGGAGACC TGTCATGCTGATTACGAAGGACAACTATCATGATTATGCCAAACGGTCCGTCGATTTCTATCGATATGTAGAGCATGGAG CCATTTCTCTGACTCATTTTTCTGATTATGTTCGATTTGATTTGCTTCACAAATATGGTGGATTCTGGCTAGATGCCACA TTGCTGATGACCGCTCCCATACCGGATTTCGTGAATGATCTCAGACTGTTCAGCATCAAGCATGGCACTATACGGCCAGG AGAGCAATGGAGTCCGATGTGGTCTCGCAATTGGACTGCATACTGTTGGGGTGGATGCGCAGGCGATCCTTTCTTTGATT TCATGTTGCGTTTCTTTGAGCGATATCATGAGCGAGAAGGCAGTGTAATGATTGACTATTTCCTGATAGATCGCATTATT TCTGTGGCATATCAAGAATTTGTGGATGTGCGGAATACCATAGATGCTATTCCTGTTAACAATGTCGATGTGCTGACATC ACCAATTGTAAATACAGCTTCGATAAACCATCGTTCAGATGACAATGGTACTTTCTTGCATAAGCTTTCTTGGAAAGAAC CACCTCAACCAGATTGTGGGAATGGCCAGCGTTCATGGTTTGGTCAGTTGTTGGATCAGTATGGTATCAGGTAA
Upstream 100 bases:
>100_bases AGGATTCGCTTAATTATCGTGATCTAAAGAATAGGATTCGAATTATTTTAGTACAATTCAAGTTGTTGCATATTCGTATA TGTGCGGTTCTTGCTGCTAA
Downstream 100 bases:
>100_bases CGCAGGTTCAGGAGATTTCCGTATATGAGACATGCATTTATGATTATGGCGCACAACAACTGGAATCAGTTGCGTACGTT GCTCTCTTTGCTTGATGACG
Product: Capsular polysaccharide synthesis
Products: NA
Alternate protein names: Glycosyl Transferase; Capsular Polysaccharide Synthesis; Alpha(1 2)Galactosyltransferase EpsI; Capsular Polysaccharide Synthesis Protein; Teichoic Acid/Polysaccharide Biosynthesis Protein; Glycosyltransferase; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYEGTLSMAVQSLGQAVNYCKRFGPRLVATKMLYKLLPQAGFSVCRQIEEYLKHYYLPDVAYHKTEFCGKIQADAPIWVM WWQGEERMPDVVRLAVASMRRFAGRRPVMLITKDNYHDYAKRSVDFYRYVEHGAISLTHFSDYVRFDLLHKYGGFWLDAT LLMTAPIPDFVNDLRLFSIKHGTIRPGEQWSPMWSRNWTAYCWGGCAGDPFFDFMLRFFERYHEREGSVMIDYFLIDRII SVAYQEFVDVRNTIDAIPVNNVDVLTSPIVNTASINHRSDDNGTFLHKLSWKEPPQPDCGNGQRSWFGQLLDQYGIR
Sequences:
>Translated_317_residues MYEGTLSMAVQSLGQAVNYCKRFGPRLVATKMLYKLLPQAGFSVCRQIEEYLKHYYLPDVAYHKTEFCGKIQADAPIWVM WWQGEERMPDVVRLAVASMRRFAGRRPVMLITKDNYHDYAKRSVDFYRYVEHGAISLTHFSDYVRFDLLHKYGGFWLDAT LLMTAPIPDFVNDLRLFSIKHGTIRPGEQWSPMWSRNWTAYCWGGCAGDPFFDFMLRFFERYHEREGSVMIDYFLIDRII SVAYQEFVDVRNTIDAIPVNNVDVLTSPIVNTASINHRSDDNGTFLHKLSWKEPPQPDCGNGQRSWFGQLLDQYGIR >Mature_317_residues MYEGTLSMAVQSLGQAVNYCKRFGPRLVATKMLYKLLPQAGFSVCRQIEEYLKHYYLPDVAYHKTEFCGKIQADAPIWVM WWQGEERMPDVVRLAVASMRRFAGRRPVMLITKDNYHDYAKRSVDFYRYVEHGAISLTHFSDYVRFDLLHKYGGFWLDAT LLMTAPIPDFVNDLRLFSIKHGTIRPGEQWSPMWSRNWTAYCWGGCAGDPFFDFMLRFFERYHEREGSVMIDYFLIDRII SVAYQEFVDVRNTIDAIPVNNVDVLTSPIVNTASINHRSDDNGTFLHKLSWKEPPQPDCGNGQRSWFGQLLDQYGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37012; Mature: 37012
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEGTLSMAVQSLGQAVNYCKRFGPRLVATKMLYKLLPQAGFSVCRQIEEYLKHYYLPDV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AYHKTEFCGKIQADAPIWVMWWQGEERMPDVVRLAVASMRRFAGRRPVMLITKDNYHDYA HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH KRSVDFYRYVEHGAISLTHFSDYVRFDLLHKYGGFWLDATLLMTAPIPDFVNDLRLFSIK HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCEEEEHHHHEECCCHHHHHHHEEEEEE HGTIRPGEQWSPMWSRNWTAYCWGGCAGDPFFDFMLRFFERYHEREGSVMIDYFLIDRII CCCCCCCCCCCCHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH SVAYQEFVDVRNTIDAIPVNNVDVLTSPIVNTASINHRSDDNGTFLHKLSWKEPPQPDCG HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC NGQRSWFGQLLDQYGIR CCHHHHHHHHHHHHCCC >Mature Secondary Structure MYEGTLSMAVQSLGQAVNYCKRFGPRLVATKMLYKLLPQAGFSVCRQIEEYLKHYYLPDV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AYHKTEFCGKIQADAPIWVMWWQGEERMPDVVRLAVASMRRFAGRRPVMLITKDNYHDYA HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH KRSVDFYRYVEHGAISLTHFSDYVRFDLLHKYGGFWLDATLLMTAPIPDFVNDLRLFSIK HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCEEEEHHHHEECCCHHHHHHHEEEEEE HGTIRPGEQWSPMWSRNWTAYCWGGCAGDPFFDFMLRFFERYHEREGSVMIDYFLIDRII CCCCCCCCCCCCHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH SVAYQEFVDVRNTIDAIPVNNVDVLTSPIVNTASINHRSDDNGTFLHKLSWKEPPQPDCG HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC NGQRSWFGQLLDQYGIR CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA