Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is epsJ [H]

Identifier: 213692960

GI number: 213692960

Start: 2326125

End: 2327120

Strand: Reverse

Name: epsJ [H]

Synonym: Blon_2106

Alternate gene names: 213692960

Gene position: 2327120-2326125 (Counterclockwise)

Preceding gene: 213692961

Following gene: 213692959

Centisome position: 82.15

GC content: 40.86

Gene sequence:

>996_bases
ATGGTCAGTTTTATCATTCCTGTGCATAATGTTGAACAGTACGTTGAGCGCTGTGCGCGAAGCATTGCTGACCAAGATTA
TAAGGCTTTGGAAATTCTTTTGGTTGAGAATGGTTCAAGTGATGGATCGCTTGCAGCATGTGAACGTCTAGCTCGGGAAG
ATGCTCGCATCAAAGTGATACAATCGGCGGTTACTGGAGTTTCTATTGCGAGGAATCTTGGTATTGAAAGAGCATCGGGA
GATTATTTAATGTTTGCTGATGCCGATGACTGGCTTGCGCAAGGTGCGGTTACTGACGCCGTATCAAGATTGGAGAAAAG
TGCCGCTGATGTCGCTTTTTATGATTACTTCAATTCGTCAGAGAAAACTGATTCTTCTCCTAGACCTGTGCATCTTACGT
TCCCATCCAATCAATTGCTTGATTCCGCGACTGCGCTAACATGGATGTTGGAAGGACGCTTTTATTGGAATGTATGGCAG
ACCATTTCCAAGCGTGAATTATTTACTGACAGTAGTGTTCGTTTCCCTAAGGGAATTTATGTGGGAGAAGATTTGTATTT
CACATATCATCTTATTGGTGCTGCAAAACAGGTCGCTTTTCTTGATAAAGCGTATTATGGGTATTTCCAGCGTCCAGATT
CCATGATGGGGAAGGCAAGAACAGTAGAGGCGATGGATAAAAGGCTCTGTGATACTTGGGACATGCAGCAGAAGCTGTGG
AACTATACAGTTGAGCGATTCCCCATGCAGCTTAATGCATATGCTGCTTTCTCGGCTCGATTGGCTTTTATTGATTTAAT
TTCAATAGGATTATTGAATAATAAATTAATCAACAACAAATGGCAAGTTTTTCTGGAAGAAAAATTTGTTCAATATAAGG
ATTCGCTTAATTATCGTGATCTAAAGAATAGGATTCGAATTATTTTAGTACAATTCAAGTTGTTGCATATTCGTATATGT
GCGGTTCTTGCTGCTAAATGTATGAGGGGACACTGA

Upstream 100 bases:

>100_bases
CTGGGTTATAACCGTGTTGCAATTACTCGGCAGCTTGAGTTGATTTATTCGTCGGCAGATTGCTGATATTCAGGGGAAAA
CGAGCATGTACAATAAGAAA

Downstream 100 bases:

>100_bases
GCATGGCAGTTCAATCATTGGGTCAGGCAGTTAATTATTGTAAGCGTTTTGGTCCAAGACTTGTTGCTACGAAAATGCTG
TATAAGCTGTTACCGCAGGC

Product: glycosyl transferase, family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG
DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ
TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW
NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC
AVLAAKCMRGH

Sequences:

>Translated_331_residues
MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG
DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ
TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW
NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC
AVLAAKCMRGH
>Mature_331_residues
MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG
DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ
TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW
NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC
AVLAAKCMRGH

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=214, Percent_Identity=25.2336448598131, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37954; Mature: 37954

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVI
CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
QSAVTGVSIARNLGIERASGDYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSS
HHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCC
EKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQTISKRELFTDSSVRFPKGIY
CCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEE
VGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW
ECCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHH
NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRD
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHH
LKNRIRIILVQFKLLHIRICAVLAAKCMRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVI
CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
QSAVTGVSIARNLGIERASGDYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSS
HHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCC
EKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQTISKRELFTDSSVRFPKGIY
CCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEE
VGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW
ECCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHH
NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRD
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHH
LKNRIRIILVQFKLLHIRICAVLAAKCMRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]