| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is epsJ [H]
Identifier: 213692960
GI number: 213692960
Start: 2326125
End: 2327120
Strand: Reverse
Name: epsJ [H]
Synonym: Blon_2106
Alternate gene names: 213692960
Gene position: 2327120-2326125 (Counterclockwise)
Preceding gene: 213692961
Following gene: 213692959
Centisome position: 82.15
GC content: 40.86
Gene sequence:
>996_bases ATGGTCAGTTTTATCATTCCTGTGCATAATGTTGAACAGTACGTTGAGCGCTGTGCGCGAAGCATTGCTGACCAAGATTA TAAGGCTTTGGAAATTCTTTTGGTTGAGAATGGTTCAAGTGATGGATCGCTTGCAGCATGTGAACGTCTAGCTCGGGAAG ATGCTCGCATCAAAGTGATACAATCGGCGGTTACTGGAGTTTCTATTGCGAGGAATCTTGGTATTGAAAGAGCATCGGGA GATTATTTAATGTTTGCTGATGCCGATGACTGGCTTGCGCAAGGTGCGGTTACTGACGCCGTATCAAGATTGGAGAAAAG TGCCGCTGATGTCGCTTTTTATGATTACTTCAATTCGTCAGAGAAAACTGATTCTTCTCCTAGACCTGTGCATCTTACGT TCCCATCCAATCAATTGCTTGATTCCGCGACTGCGCTAACATGGATGTTGGAAGGACGCTTTTATTGGAATGTATGGCAG ACCATTTCCAAGCGTGAATTATTTACTGACAGTAGTGTTCGTTTCCCTAAGGGAATTTATGTGGGAGAAGATTTGTATTT CACATATCATCTTATTGGTGCTGCAAAACAGGTCGCTTTTCTTGATAAAGCGTATTATGGGTATTTCCAGCGTCCAGATT CCATGATGGGGAAGGCAAGAACAGTAGAGGCGATGGATAAAAGGCTCTGTGATACTTGGGACATGCAGCAGAAGCTGTGG AACTATACAGTTGAGCGATTCCCCATGCAGCTTAATGCATATGCTGCTTTCTCGGCTCGATTGGCTTTTATTGATTTAAT TTCAATAGGATTATTGAATAATAAATTAATCAACAACAAATGGCAAGTTTTTCTGGAAGAAAAATTTGTTCAATATAAGG ATTCGCTTAATTATCGTGATCTAAAGAATAGGATTCGAATTATTTTAGTACAATTCAAGTTGTTGCATATTCGTATATGT GCGGTTCTTGCTGCTAAATGTATGAGGGGACACTGA
Upstream 100 bases:
>100_bases CTGGGTTATAACCGTGTTGCAATTACTCGGCAGCTTGAGTTGATTTATTCGTCGGCAGATTGCTGATATTCAGGGGAAAA CGAGCATGTACAATAAGAAA
Downstream 100 bases:
>100_bases GCATGGCAGTTCAATCATTGGGTCAGGCAGTTAATTATTGTAAGCGTTTTGGTCCAAGACTTGTTGCTACGAAAATGCTG TATAAGCTGTTACCGCAGGC
Product: glycosyl transferase, family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC AVLAAKCMRGH
Sequences:
>Translated_331_residues MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC AVLAAKCMRGH >Mature_331_residues MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVIQSAVTGVSIARNLGIERASG DYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSSEKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQ TISKRELFTDSSVRFPKGIYVGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRDLKNRIRIILVQFKLLHIRIC AVLAAKCMRGH
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=214, Percent_Identity=25.2336448598131, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 37954; Mature: 37954
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVI CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH QSAVTGVSIARNLGIERASGDYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSS HHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCC EKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQTISKRELFTDSSVRFPKGIY CCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEE VGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW ECCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHH NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRD HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHH LKNRIRIILVQFKLLHIRICAVLAAKCMRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSFIIPVHNVEQYVERCARSIADQDYKALEILLVENGSSDGSLAACERLAREDARIKVI CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH QSAVTGVSIARNLGIERASGDYLMFADADDWLAQGAVTDAVSRLEKSAADVAFYDYFNSS HHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCC EKTDSSPRPVHLTFPSNQLLDSATALTWMLEGRFYWNVWQTISKRELFTDSSVRFPKGIY CCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEE VGEDLYFTYHLIGAAKQVAFLDKAYYGYFQRPDSMMGKARTVEAMDKRLCDTWDMQQKLW ECCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHH NYTVERFPMQLNAYAAFSARLAFIDLISIGLLNNKLINNKWQVFLEEKFVQYKDSLNYRD HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHH LKNRIRIILVQFKLLHIRICAVLAAKCMRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]