Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692950

Identifier: 213692950

GI number: 213692950

Start: 2316211

End: 2316690

Strand: Direct

Name: 213692950

Synonym: Blon_2096

Alternate gene names: NA

Gene position: 2316211-2316690 (Clockwise)

Preceding gene: 213692949

Following gene: 213692951

Centisome position: 81.77

GC content: 67.92

Gene sequence:

>480_bases
ATGGCCTCGTTCCCCGCCGACCGGGGCCGCGAGCAGCTGGAAAGCCTGGAGTCCGTCGAACGGGCCGAGGACCTCGTGCT
CCACGGCGACGTCGGCTGCGGCAAGACCCACCTGGCCATCGCGATCGGCATGCTCGCATGCCAACGCATGATACCCGTGA
GGTTCCTCGCCGCCTCGAGCCTGGTCATGCGCTTGAGGAAGGCCAAGGACGACAACAGATTGGACGCCGAGCTCAAGTCG
ATAGGCAGGGCCGGGCTGGTCATCATCGACGAGCCCGGCCATCTGCCCATCGACATCAACGGGGCCCGCCTCCTGTTCCA
GGCCGGCGCGGACGGCTACGAGACCCGCAGCGTCATCTCCGACTCGAACCTCGGGTCCGGCGGATGGGGCGACGTGTTCG
GCGACGGGGACATGGCCGCCGCGGTCATGGACCGCATCGTCCACCACGGCGGGATCCTCCGCTTCCACGGCGAATCCTAA

Upstream 100 bases:

>100_bases
GAGAAGGAGAACGCGAGCCGGGCCGAATCCAAACGGCGGCGGCTGCCCGGACAGGCCGGCTTCCCCCGGAACAAGACCCT
GGACGGCTACGACCGGGGGC

Downstream 100 bases:

>100_bases
CGGAACAGGCACTCCCTCATGAAATAAACCAGACAAACAACAAAAAAAACAAGGGAACAGCCGACGATGGTGTTCAAGTT
GAACGCCGACCGTGTCCAGA

Product: IstB domain protein ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MASFPADRGREQLESLESVERAEDLVLHGDVGCGKTHLAIAIGMLACQRMIPVRFLAASSLVMRLRKAKDDNRLDAELKS
IGRAGLVIIDEPGHLPIDINGARLLFQAGADGYETRSVISDSNLGSGGWGDVFGDGDMAAAVMDRIVHHGGILRFHGES

Sequences:

>Translated_159_residues
MASFPADRGREQLESLESVERAEDLVLHGDVGCGKTHLAIAIGMLACQRMIPVRFLAASSLVMRLRKAKDDNRLDAELKS
IGRAGLVIIDEPGHLPIDINGARLLFQAGADGYETRSVISDSNLGSGGWGDVFGDGDMAAAVMDRIVHHGGILRFHGES
>Mature_158_residues
ASFPADRGREQLESLESVERAEDLVLHGDVGCGKTHLAIAIGMLACQRMIPVRFLAASSLVMRLRKAKDDNRLDAELKSI
GRAGLVIIDEPGHLPIDINGARLLFQAGADGYETRSVISDSNLGSGGWGDVFGDGDMAAAVMDRIVHHGGILRFHGES

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 17021; Mature: 16889

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFPADRGREQLESLESVERAEDLVLHGDVGCGKTHLAIAIGMLACQRMIPVRFLAASS
CCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMRLRKAKDDNRLDAELKSIGRAGLVIIDEPGHLPIDINGARLLFQAGADGYETRSVIS
HHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHC
DSNLGSGGWGDVFGDGDMAAAVMDRIVHHGGILRFHGES
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure 
ASFPADRGREQLESLESVERAEDLVLHGDVGCGKTHLAIAIGMLACQRMIPVRFLAASS
CCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMRLRKAKDDNRLDAELKSIGRAGLVIIDEPGHLPIDINGARLLFQAGADGYETRSVIS
HHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHC
DSNLGSGGWGDVFGDGDMAAAVMDRIVHHGGILRFHGES
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2174857 [H]