Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692949

Identifier: 213692949

GI number: 213692949

Start: 2313943

End: 2314356

Strand: Direct

Name: 213692949

Synonym: Blon_2094

Alternate gene names: NA

Gene position: 2313943-2314356 (Clockwise)

Preceding gene: 213692947

Following gene: 213692950

Centisome position: 81.69

GC content: 63.04

Gene sequence:

>414_bases
ATGTCCGGTCCCGAGGAACGGCGACGTACGGTGGAGCTGTATTTCACCACGCCGATGACCACGGCCCAGGTGGTGAGGCA
TCTGGGCGATCCGACCAGGCAGTGCCTGGAACGCTGGCTGGCGGCGGATCCCGGGTATGCTGGCCATATGGCGGAACCAA
TCATCCCGCCGGAGATGAGGACCAAGGCGATCGAACCGGTGCCGGACGGCATGCGGCAGAAGCAGGCCGCCGAACTGCTC
GGCGTAAGCGTCGGAGCTGTCCACAACTGGGTCAAGGCGTATCGCGAGGGCGGCATGGCCGCGATGCAGCCCAGGAACAG
GAACGCCAGCCAGACCAACAAGCCTGCTCCGCGACCCACTGTGTGTGATCGAATAAAGGTGTTCACTGTCGGCACTTGTT
TCTGTACACCTTGA

Upstream 100 bases:

>100_bases
TGAGATAAAAATAACGCAATTTACATCTTATGCGCGACCTCGCTAACCGATAGGGGGGGCTGCGGACGTTTTCTTGGAGA
CTGAACGAAAGGATTATCAT

Downstream 100 bases:

>100_bases
GCGTTCAATTTGGACATCGCCGGCGGTGACGGTGCCGGTGAAATAAGAACACCGGCATCGTCTTGTTCCTTGATGGATTC
CCGAGTGCCTGTCAACCAAA

Product: IS3 family transposase

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSGPEERRRTVELYFTTPMTTAQVVRHLGDPTRQCLERWLAADPGYAGHMAEPIIPPEMRTKAIEPVPDGMRQKQAAELL
GVSVGAVHNWVKAYREGGMAAMQPRNRNASQTNKPAPRPTVCDRIKVFTVGTCFCTP

Sequences:

>Translated_137_residues
MSGPEERRRTVELYFTTPMTTAQVVRHLGDPTRQCLERWLAADPGYAGHMAEPIIPPEMRTKAIEPVPDGMRQKQAAELL
GVSVGAVHNWVKAYREGGMAAMQPRNRNASQTNKPAPRPTVCDRIKVFTVGTCFCTP
>Mature_136_residues
SGPEERRRTVELYFTTPMTTAQVVRHLGDPTRQCLERWLAADPGYAGHMAEPIIPPEMRTKAIEPVPDGMRQKQAAELLG
VSVGAVHNWVKAYREGGMAAMQPRNRNASQTNKPAPRPTVCDRIKVFTVGTCFCTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15205; Mature: 15074

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPEERRRTVELYFTTPMTTAQVVRHLGDPTRQCLERWLAADPGYAGHMAEPIIPPEMR
CCCHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TKAIEPVPDGMRQKQAAELLGVSVGAVHNWVKAYREGGMAAMQPRNRNASQTNKPAPRPT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCH
VCDRIKVFTVGTCFCTP
HHHHEEEEEEEEEEECC
>Mature Secondary Structure 
SGPEERRRTVELYFTTPMTTAQVVRHLGDPTRQCLERWLAADPGYAGHMAEPIIPPEMR
CCHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TKAIEPVPDGMRQKQAAELLGVSVGAVHNWVKAYREGGMAAMQPRNRNASQTNKPAPRPT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCH
VCDRIKVFTVGTCFCTP
HHHHEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA