| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692942
Identifier: 213692942
GI number: 213692942
Start: 2305703
End: 2306779
Strand: Direct
Name: 213692942
Synonym: Blon_2087
Alternate gene names: NA
Gene position: 2305703-2306779 (Clockwise)
Preceding gene: 213692940
Following gene: 213692946
Centisome position: 81.39
GC content: 55.34
Gene sequence:
>1077_bases GTGTTGCAACGATCACTAGAACTCGCCCATCACTTCATCGGCCATAACGGCTATGACGTGCTGAAACTCCCCTTGGGACC GGAACGGATCTTCTTCCAGCTCGTCATGGCCGGCGGCGGCAAGGTCGGCGCGGTCATCTTCTTTTCCATCTCCGCATGGT TCTTCCTCGACAGGGAGCAGACCATCAAATCCAACCTGAAACGCGTGTGGATCATGGAACGCGAGCTCCTGTTCTGGAGT CTGTGCCTTGTAGCGTTCTACCTCGTGTTCGACCGAGCCGATCTCAGTATGAAACTCATGGTGAAAAGCGTCATGCCGTT GAGCATGGGCGTATGGTGGTACGCCACCGCCTACGCCATATTCCTGGCGCTCCTCCCCTTCCTGGCCAAGGGACTGAAGG CGCTCGGACGCGAATACCACCTCGCGCTGGCCACGACCGTGCTGGTCATATGGGGATTGACCAGTTTCATCCCCGGAATG ATAAAAATTAATGATGGTTTCTTCGGATTCATCTACCTGTTCATTCTGATTTCTGCTTATAAGTGGTATATGGAACCGTT CACCACCAAGCAGGTCTGGCTGACGACCGGCATCAGGCTCGATTTTTTCCTGTTGTACACCTGCGTCTCCATAACATTGT CGCTGCTTAGGCACGACATGGGAATATACATCACCGGTGATTGGCGGTTACCCGTCATCATGGTCGGCTTCGGCATGTTC CTGCTGTTCGGCCGCGTCACCTTCCACAATCGAACCATCAACCGAATCGCGCAATCCGCGTTCGCCGTGTACCTGATCAC CGACTACGCTGCTTCAATGAAACTGCTCTGGGCACGGCTGCTCAATCTGCAGAACCTGTACCAGCAGCCATTGGCAATCC TGCAGATCCTCGGCATCCTGCCGGCGATCTACGCCGTATGCACTCTGCTTGACTTCATCCGCCAAGCATTGTTCGCAGCC ACTATCGACCGGCGTCGCGGGCACTGGTTCGAGCTGCTGTGGGACAAAGTCTCCATCCGAGTGCACAATCATTCGCGCAC GCCGATGACCGATTCATCCGACACTCAAGCCCGCTGA
Upstream 100 bases:
>100_bases TCGTCGGATATTCGACGCCGTTGAACGCCCAACGGTGTTCCCCGCCACGGTCTTCGTCTCGGTGGCTTCTGGCCACCTGA CCCTCCTTGCGGTAGGTCAG
Downstream 100 bases:
>100_bases AAAACGATGAACCATCATTGATTAGCTGATAATCCGCGCGACCGAACCTAGACGGTCGCGCGGATTATCAGCATGTAAGC CAGTGGAAACGTCAAAGGAC
Product: proline symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLQRSLELAHHFIGHNGYDVLKLPLGPERIFFQLVMAGGGKVGAVIFFSISAWFFLDREQTIKSNLKRVWIMERELLFWS LCLVAFYLVFDRADLSMKLMVKSVMPLSMGVWWYATAYAIFLALLPFLAKGLKALGREYHLALATTVLVIWGLTSFIPGM IKINDGFFGFIYLFILISAYKWYMEPFTTKQVWLTTGIRLDFFLLYTCVSITLSLLRHDMGIYITGDWRLPVIMVGFGMF LLFGRVTFHNRTINRIAQSAFAVYLITDYAASMKLLWARLLNLQNLYQQPLAILQILGILPAIYAVCTLLDFIRQALFAA TIDRRRGHWFELLWDKVSIRVHNHSRTPMTDSSDTQAR
Sequences:
>Translated_358_residues MLQRSLELAHHFIGHNGYDVLKLPLGPERIFFQLVMAGGGKVGAVIFFSISAWFFLDREQTIKSNLKRVWIMERELLFWS LCLVAFYLVFDRADLSMKLMVKSVMPLSMGVWWYATAYAIFLALLPFLAKGLKALGREYHLALATTVLVIWGLTSFIPGM IKINDGFFGFIYLFILISAYKWYMEPFTTKQVWLTTGIRLDFFLLYTCVSITLSLLRHDMGIYITGDWRLPVIMVGFGMF LLFGRVTFHNRTINRIAQSAFAVYLITDYAASMKLLWARLLNLQNLYQQPLAILQILGILPAIYAVCTLLDFIRQALFAA TIDRRRGHWFELLWDKVSIRVHNHSRTPMTDSSDTQAR >Mature_358_residues MLQRSLELAHHFIGHNGYDVLKLPLGPERIFFQLVMAGGGKVGAVIFFSISAWFFLDREQTIKSNLKRVWIMERELLFWS LCLVAFYLVFDRADLSMKLMVKSVMPLSMGVWWYATAYAIFLALLPFLAKGLKALGREYHLALATTVLVIWGLTSFIPGM IKINDGFFGFIYLFILISAYKWYMEPFTTKQVWLTTGIRLDFFLLYTCVSITLSLLRHDMGIYITGDWRLPVIMVGFGMF LLFGRVTFHNRTINRIAQSAFAVYLITDYAASMKLLWARLLNLQNLYQQPLAILQILGILPAIYAVCTLLDFIRQALFAA TIDRRRGHWFELLWDKVSIRVHNHSRTPMTDSSDTQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41345; Mature: 41345
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRSLELAHHFIGHNGYDVLKLPLGPERIFFQLVMAGGGKVGAVIFFSISAWFFLDREQ CCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHEEEEHHHHHEECHHH TIKSNLKRVWIMERELLFWSLCLVAFYLVFDRADLSMKLMVKSVMPLSMGVWWYATAYAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLALLPFLAKGLKALGREYHLALATTVLVIWGLTSFIPGMIKINDGFFGFIYLFILISAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH KWYMEPFTTKQVWLTTGIRLDFFLLYTCVSITLSLLRHDMGIYITGDWRLPVIMVGFGMF HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LLFGRVTFHNRTINRIAQSAFAVYLITDYAASMKLLWARLLNLQNLYQQPLAILQILGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAIYAVCTLLDFIRQALFAATIDRRRGHWFELLWDKVSIRVHNHSRTPMTDSSDTQAR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLQRSLELAHHFIGHNGYDVLKLPLGPERIFFQLVMAGGGKVGAVIFFSISAWFFLDREQ CCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHEEEEHHHHHEECHHH TIKSNLKRVWIMERELLFWSLCLVAFYLVFDRADLSMKLMVKSVMPLSMGVWWYATAYAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLALLPFLAKGLKALGREYHLALATTVLVIWGLTSFIPGMIKINDGFFGFIYLFILISAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH KWYMEPFTTKQVWLTTGIRLDFFLLYTCVSITLSLLRHDMGIYITGDWRLPVIMVGFGMF HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LLFGRVTFHNRTINRIAQSAFAVYLITDYAASMKLLWARLLNLQNLYQQPLAILQILGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAIYAVCTLLDFIRQALFAATIDRRRGHWFELLWDKVSIRVHNHSRTPMTDSSDTQAR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA