| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692940
Identifier: 213692940
GI number: 213692940
Start: 2303315
End: 2304031
Strand: Direct
Name: 213692940
Synonym: Blon_2085
Alternate gene names: NA
Gene position: 2303315-2304031 (Clockwise)
Preceding gene: 213692939
Following gene: 213692942
Centisome position: 81.31
GC content: 54.53
Gene sequence:
>717_bases ATGATTGACGTCCTCGCGCACAACCACGCTCCAGATGAAACATGGGTCCTCGAATGGCTCTCATCACCACGTCTCCAAAC GTATCTTGACGCTTCAGGGAACAATCTGCAGCGCGCCCTCCGGTTGTACGAATGGAATATCAATCTTGGCCAGACCCTGA TGAAGGACATCGCGTTCTTCGAAGTCGCACTACGCAATGCCTACAACAGAGAAATCGACTCGCGTTGGGACGGTACCAGG CACTGGCTGTTCGATGACGATTCACCTGTCAACATCCCTATACCACGACATAACAGAGCCGGACAGTCGTTCGACGCGAA CGCATTGAACCGGACGAGCATTCGCAACGCCACACCCTCCCGTACGGAGACCATACAACCGGACAAGACGATCGCGAACC TTCCACTTGGATTCTGGGCGCATCTGACCTACAAAGCCCACGAAAGAATTCTGTGGATACCATACCTCCACCACGCGTGG CCCTCCGGGACGAATCGTGCGGACCTGAACGCTAAAATCCGTCTCATCAACGAGTGCAGGAACCGTATTGCGCATCATGA GCCGTTGTTTCACAATGCCGACGGGACAAGGAACCCGACCGTGGTTGATGGATTGGTTGTGGATTTGTTCCATGAACTCC TGCCACAAGCAGATGTCTTCGAACCCGATGCGCCAACCCCCGTCGAACTTTTTCTGCATTCCAGCCCACGCCCCTGA
Upstream 100 bases:
>100_bases CTGTTATACTTATGGATACAAGCCCCGTGCTGACCGCTGGTTCCCATGTCACCGGGGCATTGCTTTACTCGTTCGCCTAC GACGCCAAGGAGTCCCAAGA
Downstream 100 bases:
>100_bases CTCACTTCGGAACATTCGTCCCGCGGCCGTCCGCTGACGCGATTCTGTCTTCCCTTACAGCATGGATTGACCGATATCCC GAATCAGTCAATTCAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIDVLAHNHAPDETWVLEWLSSPRLQTYLDASGNNLQRALRLYEWNINLGQTLMKDIAFFEVALRNAYNREIDSRWDGTR HWLFDDDSPVNIPIPRHNRAGQSFDANALNRTSIRNATPSRTETIQPDKTIANLPLGFWAHLTYKAHERILWIPYLHHAW PSGTNRADLNAKIRLINECRNRIAHHEPLFHNADGTRNPTVVDGLVVDLFHELLPQADVFEPDAPTPVELFLHSSPRP
Sequences:
>Translated_238_residues MIDVLAHNHAPDETWVLEWLSSPRLQTYLDASGNNLQRALRLYEWNINLGQTLMKDIAFFEVALRNAYNREIDSRWDGTR HWLFDDDSPVNIPIPRHNRAGQSFDANALNRTSIRNATPSRTETIQPDKTIANLPLGFWAHLTYKAHERILWIPYLHHAW PSGTNRADLNAKIRLINECRNRIAHHEPLFHNADGTRNPTVVDGLVVDLFHELLPQADVFEPDAPTPVELFLHSSPRP >Mature_238_residues MIDVLAHNHAPDETWVLEWLSSPRLQTYLDASGNNLQRALRLYEWNINLGQTLMKDIAFFEVALRNAYNREIDSRWDGTR HWLFDDDSPVNIPIPRHNRAGQSFDANALNRTSIRNATPSRTETIQPDKTIANLPLGFWAHLTYKAHERILWIPYLHHAW PSGTNRADLNAKIRLINECRNRIAHHEPLFHNADGTRNPTVVDGLVVDLFHELLPQADVFEPDAPTPVELFLHSSPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27421; Mature: 27421
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVLAHNHAPDETWVLEWLSSPRLQTYLDASGNNLQRALRLYEWNINLGQTLMKDIAFF CEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH EVALRNAYNREIDSRWDGTRHWLFDDDSPVNIPIPRHNRAGQSFDANALNRTSIRNATPS HHHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTETIQPDKTIANLPLGFWAHLTYKAHERILWIPYLHHAWPSGTNRADLNAKIRLINECR CCCCCCCCCHHHHCCCHHHHHEEEECCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHH NRIAHHEPLFHNADGTRNPTVVDGLVVDLFHELLPQADVFEPDAPTPVELFLHSSPRP HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MIDVLAHNHAPDETWVLEWLSSPRLQTYLDASGNNLQRALRLYEWNINLGQTLMKDIAFF CEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH EVALRNAYNREIDSRWDGTRHWLFDDDSPVNIPIPRHNRAGQSFDANALNRTSIRNATPS HHHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTETIQPDKTIANLPLGFWAHLTYKAHERILWIPYLHHAWPSGTNRADLNAKIRLINECR CCCCCCCCCHHHHCCCHHHHHEEEECCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHH NRIAHHEPLFHNADGTRNPTVVDGLVVDLFHELLPQADVFEPDAPTPVELFLHSSPRP HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA