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The map label for this gene is IS1086 [H]

Identifier: 213692941

GI number: 213692941

Start: 2304407

End: 2305594

Strand: Reverse

Name: IS1086 [H]

Synonym: Blon_2086

Alternate gene names: 213692941

Gene position: 2305594-2304407 (Counterclockwise)

Preceding gene: 213692943

Following gene: 213692938

Centisome position: 81.39

GC content: 68.1

Gene sequence:

>1188_bases
ATGTGCGAGGCGAGACGCGCCGAGTACGTGCGCCTGCTGGACGAGGAAGGCATGAACTTCACCCAGGCCGCGCACGCGGT
CGGCGTCTCGAAACGCACCGGCAAGGCGTGGCGCAACGGCAGGACGCGCGCCACGGGAAGGAATGAGAAACCCCTGGTGG
ACCGGTATCGTTCCACCATGGACAAACCCAGGACCCTCCATCCGCGCTACCTGAGCCAGGAGGAGCGCATCCAGATCGCG
GACCGTCTGTGTCTGGGCGATTCGGTCCGCGCCATCGCCCGCCTGCTGGGCCGCGACCCCGGCACGGTCGGCCGCGAGGT
CGAGCGCGACGGGAATCCCGAGTCCGGCGGTTACGAGCCCTGCCGCGCCCGGCAGAAGGCCGCGGACCGGCTCAAACGCC
CCAAACCGCGCAAGGCGTCCGAGGGCACGCGACTGTGGGACGAGATCGCCGCCGGGTTGCGCAGGCATTGGAGCCCGGAG
CAGATAGCCAACCGGCCGAGGCCGGACCTCCCGGATAATGGGGATATGCACGCGAGCGTCGAGACGATCTGCCAGGCCAT
CTACCTGCAGGCCAGGGGCGAACTCAGGCAGGAGCCGAAACGCGCCATGAGGCAGGGGCGAACCGCCCGCAGACCCCGAG
GCGGCCAAGGCCGCAAACCCCGTTTCCGCGAACCCATGGTCATGATCTCGGAGCGGCCCCCGGAGATCGAGGACCGGGCG
GTCCCGGGCCACTGGGAGGGCGATCTCATCACCGGCAGCCGCAACAAAAGCGCCATCGGCACGCTCGTCGAGCGCACCAC
CAGGTTCACGATCCTGCCGCACCTGCCCGACGGGCACGACGCCGAACACGCCCGGCAGGCCATCATCGACAAGATGCAGC
ACCTGCCCAAACTCCTGCGCAACAGCCTGACCTGGGACCAGGGAGCGGAACTCGCCCTGCACAAACGGATCGGCGCCTCG
CTGGACATGGCCGTCTGCTTCTGCGACCCGCACTCCCCGTGGCAGCGCGGCACCAACGAGAACACCAACGGGCTCCTGCG
CCAGTACTTCCCCAAAGGCACCGACCCATCCGTCTACCCGGAGGACCACCTCGACGCGGTCGCCGAGGAACTCAACGACC
GGCCACGCAAAACCCTCGGGTTCATGAAACCAAGCGAGAAGATCATCGAACTGCTCGACGCCGCGTGA

Upstream 100 bases:

>100_bases
CCGCAAGGAGGGTCAGGTGGCCAGAAGCCACCGAGACGAAGACCGTGGCGGGGAACACCGTTGGGCGTTCAACGGCGTCG
AATATCCGACGAGGAAGCTG

Downstream 100 bases:

>100_bases
TAACCTCAACAACCGACAACGTGACCATGGAAGGCCGCTCAAACCTCAGGTGTTGCAACCACCACTAGAATCCGCCATGT
GCCGGTGCGCTGTGTTTGGC

Product: transcriptional regulator, Fis family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIA
DRLCLGDSVRAIARLLGRDPGTVGREVERDGNPESGGYEPCRARQKAADRLKRPKPRKASEGTRLWDEIAAGLRRHWSPE
QIANRPRPDLPDNGDMHASVETICQAIYLQARGELRQEPKRAMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRA
VPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGAS
LDMAVCFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPEDHLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA

Sequences:

>Translated_395_residues
MCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIA
DRLCLGDSVRAIARLLGRDPGTVGREVERDGNPESGGYEPCRARQKAADRLKRPKPRKASEGTRLWDEIAAGLRRHWSPE
QIANRPRPDLPDNGDMHASVETICQAIYLQARGELRQEPKRAMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRA
VPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGAS
LDMAVCFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPEDHLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA
>Mature_395_residues
MCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIA
DRLCLGDSVRAIARLLGRDPGTVGREVERDGNPESGGYEPCRARQKAADRLKRPKPRKASEGTRLWDEIAAGLRRHWSPE
QIANRPRPDLPDNGDMHASVETICQAIYLQARGELRQEPKRAMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRA
VPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGAS
LDMAVCFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPEDHLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=324, Percent_Identity=42.9012345679012, Blast_Score=224, Evalue=6e-60,
Organism=Escherichia coli, GI1790736, Length=324, Percent_Identity=42.9012345679012, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1787671, Length=324, Percent_Identity=42.9012345679012, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 44871; Mature: 44871

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTM
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DKPRTLHPRYLSQEERIQIADRLCLGDSVRAIARLLGRDPGTVGREVERDGNPESGGYEP
CCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCCHHHCCCCCCCCCCCH
CRARQKAADRLKRPKPRKASEGTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHH
ETICQAIYLQARGELRQEPKRAMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
VPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLR
CCCCCCCCEEECCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSLTWDQGAELALHKRIGASLDMAVCFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYP
HCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC
EDHLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA
HHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTM
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DKPRTLHPRYLSQEERIQIADRLCLGDSVRAIARLLGRDPGTVGREVERDGNPESGGYEP
CCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCCHHHCCCCCCCCCCCH
CRARQKAADRLKRPKPRKASEGTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHH
ETICQAIYLQARGELRQEPKRAMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
VPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLR
CCCCCCCCEEECCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSLTWDQGAELALHKRIGASLDMAVCFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYP
HCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC
EDHLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA
HHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]