| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692943
Identifier: 213692943
GI number: 213692943
Start: 2306923
End: 2307312
Strand: Reverse
Name: 213692943
Synonym: Blon_2088
Alternate gene names: NA
Gene position: 2307312-2306923 (Counterclockwise)
Preceding gene: 213692944
Following gene: 213692941
Centisome position: 81.45
GC content: 47.95
Gene sequence:
>390_bases ATGAACGTCAACAGAATTATGCTGCTCGGCCAGTCAAGCGAGCGCGATCTTGCCCAAGACTTGCAGGAAGGCGCGGAAAG CAACATCAATTTTAATTTTGGTTTGAATCCAAGCGATGACAAGCCTTGGCCGTACGAATTAACGTTGCATTCGGAGATCA CTCTCAAAAAAGGCGATTCCGAAAAGAATGTGTCTCCCCTTTTCGTATCCGATCTGCGCTATGCGATTCAATTCGATTCG CCCATTGATGATGAAAATACCCCGGCGGCTCTTTCCGTTGCATGGCCTTACATGAGGGAAAAGCTCGTTGAACAATTGCA GTCGCATGATATACCTGCGATGTCAATAGTGCCGTTGTCGATTGCTGCGTTGCCTGCGCAATCCCAATAG
Upstream 100 bases:
>100_bases ATCATGATGGTCCGCACAAGGTTACCGTAATGGGTGCTTCGGGCAAGGCTACTCCTTGGCGTGCAAATGAAGACATGGAA TCGAAAAAGGAGCTGGTTGG
Downstream 100 bases:
>100_bases AACTGACTTGAGCGTTAGTTCTATTGGGTGTTCTGGCACGTTCGTCCTTTGACGTTTCCACTGGCTTACATGCTGATAAT CCGCGCGACCGTCTAGGTTC
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MNVNRIMLLGQSSERDLAQDLQEGAESNINFNFGLNPSDDKPWPYELTLHSEITLKKGDSEKNVSPLFVSDLRYAIQFDS PIDDENTPAALSVAWPYMREKLVEQLQSHDIPAMSIVPLSIAALPAQSQ
Sequences:
>Translated_129_residues MNVNRIMLLGQSSERDLAQDLQEGAESNINFNFGLNPSDDKPWPYELTLHSEITLKKGDSEKNVSPLFVSDLRYAIQFDS PIDDENTPAALSVAWPYMREKLVEQLQSHDIPAMSIVPLSIAALPAQSQ >Mature_129_residues MNVNRIMLLGQSSERDLAQDLQEGAESNINFNFGLNPSDDKPWPYELTLHSEITLKKGDSEKNVSPLFVSDLRYAIQFDS PIDDENTPAALSVAWPYMREKLVEQLQSHDIPAMSIVPLSIAALPAQSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14414; Mature: 14414
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNRIMLLGQSSERDLAQDLQEGAESNINFNFGLNPSDDKPWPYELTLHSEITLKKGDS CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCEEEEECCCC EKNVSPLFVSDLRYAIQFDSPIDDENTPAALSVAWPYMREKLVEQLQSHDIPAMSIVPLS CCCCCCEEECCEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEE IAALPAQSQ EEECCCCCC >Mature Secondary Structure MNVNRIMLLGQSSERDLAQDLQEGAESNINFNFGLNPSDDKPWPYELTLHSEITLKKGDS CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCEEEEECCCC EKNVSPLFVSDLRYAIQFDSPIDDENTPAALSVAWPYMREKLVEQLQSHDIPAMSIVPLS CCCCCCEEECCEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEE IAALPAQSQ EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA