| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is sacA [H]
Identifier: 213692912
GI number: 213692912
Start: 2266135
End: 2268045
Strand: Reverse
Name: sacA [H]
Synonym: Blon_2056
Alternate gene names: 213692912
Gene position: 2268045-2266135 (Counterclockwise)
Preceding gene: 213692913
Following gene: 213692911
Centisome position: 80.07
GC content: 57.4
Gene sequence:
>1911_bases ATGCCTGACAACTATTCCGTTGCCATCGAAACCGGCGGCTACCGCTTGCTGGAATTGTTCGCCGAAAGATGCGGCGATGA CGCTGCCGTCACCATTACAGACGGGGACGGCCATCAAATCGCCAGCCATGTCATGCCGGTGGCCGAGCGTCGCCACCGTT TCTTGATTCCGGTGCCGACAAACGTGTGTCTCACGGTGAGAGCGCGCCAACTGACCGTGCGGTTCGCCTACTTGTCCGAG TGTGAGAATCTTCTTGATGAAGGCGTGCGTTTCATCAGCATGAATCCATATGACAATGAATGGGATACGCAGCCGACGCT GGATCAGATCTATGATCGTTTCGCTCGCCCTGCGGCGCATTTCGAGCCATTCGCTCGCTGGATGAATGATCCTAACGGCC TGTGTCGTTTCCAAGGACGCTACCATCTGTTCTACCAATTCAATCCGTATGGTTTTGGCTGGGACAATATGCACTGGGGC CATGCAGTGAGCCGCGATCTGGTGCATTGGACGCATCTGCCAATCTTCCTCGAACCGCAGCCGGAGCTGCATATCGACGA ACGCATCGTTGGCGGCGCGTTCTCCGGATCCGCGGTGACGGTGGATGCGTGTGACAATCCCTGCAAGGGTGATGATGCGG CCGCTATTCGCCTGTATCTAACCCGGCACCTGGAGACTCGCGGAGACGAATCGTCTGTTACTGAATACCAGACCACCTGC TTGTGTGAGGATGGCGTGCATGTGAGTGTCGAATCTCCAGTCGCGTTGCGCGTTAACGATGGTTTTGGCTTCGATTTCCG TGATCCGAAGGTGGAAACCGGCATGGGCGGCGAGGCGATCGATCCGGAACGCGCTTACATGGTGACCGCCACGAATCTGC CGGTCGCCGAATTCGATACTGATGCTGTGTCCTCCGCGGCGCCTGGCATCAGCGTACAGGGTACAGACGGCTGGTTTACG TGCGGTCCGCAAGGCATGCCCGGCACCGACAAGCCCAATATGGATACGGTGCCTGCCATGGCGCTCTTCTCCGCGAAGAA ACCGCTCAAGCGCAACGTGACGTGGCAGTATGAAGGACCGGTGCTCGCCGACTTCGGCCACCAGCTGTCACGTACCTACG AATGTCCTGACCTGTTCCAGCTCGACGGCAAGACGGTCGCCATCGGAGCTTTGATGCACTACCGTGACAAGCAAGGTCGT TTCCAGCAGGTGCGTTGGTATGTTGGTGATCTCAAGGACACCGCCGATGGCCCACGTTTGCAGGTAGGGAACAGCGATTG GTGCGATTTCGGTACCGGCTACTACGCGACACAAAGCTTTGCTGCCGACGACGGGCGTCGTATCGTGTTCGGCTGGTATA CCGACTTTCCCGCGATGCGTGTGGAAAAGCCGTGCATCGCTAACGGCATGATGTCGCTGCCACGTGAACTGCACGTGCGT GACGGCCGCTTGACCAGCCGTCCTGTCAAGGAAGTGTACGAGCAGCTGCTAGGCGATCGTTTGGAAGCGCATGCAGACGA AAACGGGACCTTCTTTATTGTGCCGAACAACGCGTATTACACGGACATGCATCTGGCTGACGATGACGATTTCACAATGC TCATCGCGACTGGTACCAATTCCGCCAATGGTAATTCGATGGAATTGCAGCTGCAGCGTCGCGACGGCGTGACCCGACTG GTCACGAAGGGAACAGTCGTGGACGACATCGATTTCGATAGCGGCATCGCCGATGTGCGTCGCGTCGAAATCTTCTTCGA CCGTAATGTGGTGGAAGTCTTCCTTAACAACGGCGAAGCGGCCGGCAGTATGCTGTTCCAAGGTGCGGACGGCGATGGCG AGTTCCGTTTTGTTGCTGACGGCAAGGTCGATTGCGTGGATGTGCGTGTGCTTGACGGCATCTGGCGGTGA
Upstream 100 bases:
>100_bases GACGGGTGTTCCCCTTTTTCATATTTAGTTTTCCGATTATCAGTTTTTCAATGCGTAGCCACGTGATATCTGATCATGTG GCGCTGTGGAGGAAATTATT
Downstream 100 bases:
>100_bases CATACAGCTGCTGCAGCGGTAGGTGGTAACCGGCAGTCATCTCAGTATGTAAGGCAAAACAGACGAAAGGCACGTGTTTT GGCACGTGCCTTCCCTATAC
Product: glycosyl hydrolase family 32, N terminal domain protein
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MPDNYSVAIETGGYRLLELFAERCGDDAAVTITDGDGHQIASHVMPVAERRHRFLIPVPTNVCLTVRARQLTVRFAYLSE CENLLDEGVRFISMNPYDNEWDTQPTLDQIYDRFARPAAHFEPFARWMNDPNGLCRFQGRYHLFYQFNPYGFGWDNMHWG HAVSRDLVHWTHLPIFLEPQPELHIDERIVGGAFSGSAVTVDACDNPCKGDDAAAIRLYLTRHLETRGDESSVTEYQTTC LCEDGVHVSVESPVALRVNDGFGFDFRDPKVETGMGGEAIDPERAYMVTATNLPVAEFDTDAVSSAAPGISVQGTDGWFT CGPQGMPGTDKPNMDTVPAMALFSAKKPLKRNVTWQYEGPVLADFGHQLSRTYECPDLFQLDGKTVAIGALMHYRDKQGR FQQVRWYVGDLKDTADGPRLQVGNSDWCDFGTGYYATQSFAADDGRRIVFGWYTDFPAMRVEKPCIANGMMSLPRELHVR DGRLTSRPVKEVYEQLLGDRLEAHADENGTFFIVPNNAYYTDMHLADDDDFTMLIATGTNSANGNSMELQLQRRDGVTRL VTKGTVVDDIDFDSGIADVRRVEIFFDRNVVEVFLNNGEAAGSMLFQGADGDGEFRFVADGKVDCVDVRVLDGIWR
Sequences:
>Translated_636_residues MPDNYSVAIETGGYRLLELFAERCGDDAAVTITDGDGHQIASHVMPVAERRHRFLIPVPTNVCLTVRARQLTVRFAYLSE CENLLDEGVRFISMNPYDNEWDTQPTLDQIYDRFARPAAHFEPFARWMNDPNGLCRFQGRYHLFYQFNPYGFGWDNMHWG HAVSRDLVHWTHLPIFLEPQPELHIDERIVGGAFSGSAVTVDACDNPCKGDDAAAIRLYLTRHLETRGDESSVTEYQTTC LCEDGVHVSVESPVALRVNDGFGFDFRDPKVETGMGGEAIDPERAYMVTATNLPVAEFDTDAVSSAAPGISVQGTDGWFT CGPQGMPGTDKPNMDTVPAMALFSAKKPLKRNVTWQYEGPVLADFGHQLSRTYECPDLFQLDGKTVAIGALMHYRDKQGR FQQVRWYVGDLKDTADGPRLQVGNSDWCDFGTGYYATQSFAADDGRRIVFGWYTDFPAMRVEKPCIANGMMSLPRELHVR DGRLTSRPVKEVYEQLLGDRLEAHADENGTFFIVPNNAYYTDMHLADDDDFTMLIATGTNSANGNSMELQLQRRDGVTRL VTKGTVVDDIDFDSGIADVRRVEIFFDRNVVEVFLNNGEAAGSMLFQGADGDGEFRFVADGKVDCVDVRVLDGIWR >Mature_635_residues PDNYSVAIETGGYRLLELFAERCGDDAAVTITDGDGHQIASHVMPVAERRHRFLIPVPTNVCLTVRARQLTVRFAYLSEC ENLLDEGVRFISMNPYDNEWDTQPTLDQIYDRFARPAAHFEPFARWMNDPNGLCRFQGRYHLFYQFNPYGFGWDNMHWGH AVSRDLVHWTHLPIFLEPQPELHIDERIVGGAFSGSAVTVDACDNPCKGDDAAAIRLYLTRHLETRGDESSVTEYQTTCL CEDGVHVSVESPVALRVNDGFGFDFRDPKVETGMGGEAIDPERAYMVTATNLPVAEFDTDAVSSAAPGISVQGTDGWFTC GPQGMPGTDKPNMDTVPAMALFSAKKPLKRNVTWQYEGPVLADFGHQLSRTYECPDLFQLDGKTVAIGALMHYRDKQGRF QQVRWYVGDLKDTADGPRLQVGNSDWCDFGTGYYATQSFAADDGRRIVFGWYTDFPAMRVEKPCIANGMMSLPRELHVRD GRLTSRPVKEVYEQLLGDRLEAHADENGTFFIVPNNAYYTDMHLADDDDFTMLIATGTNSANGNSMELQLQRRDGVTRLV TKGTVVDDIDFDSGIADVRRVEIFFDRNVVEVFLNNGEAAGSMLFQGADGDGEFRFVADGKVDCVDVRVLDGIWR
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=181, Percent_Identity=33.7016574585635, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 71230; Mature: 71099
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNYSVAIETGGYRLLELFAERCGDDAAVTITDGDGHQIASHVMPVAERRHRFLIPVPT CCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC NVCLTVRARQLTVRFAYLSECENLLDEGVRFISMNPYDNEWDTQPTLDQIYDRFARPAAH CEEEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHH FEPFARWMNDPNGLCRFQGRYHLFYQFNPYGFGWDNMHWGHAVSRDLVHWTHLPIFLEPQ HHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHCEEEECCCEEECCC PELHIDERIVGGAFSGSAVTVDACDNPCKGDDAAAIRLYLTRHLETRGDESSVTEYQTTC CCCEECCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEEE LCEDGVHVSVESPVALRVNDGFGFDFRDPKVETGMGGEAIDPERAYMVTATNLPVAEFDT EECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCC DAVSSAAPGISVQGTDGWFTCGPQGMPGTDKPNMDTVPAMALFSAKKPLKRNVTWQYEGP HHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCEEEECCC VLADFGHQLSRTYECPDLFQLDGKTVAIGALMHYRDKQGRFQQVRWYVGDLKDTADGPRL CHHHHHHHHHCCCCCCCCEEECCCEEEEEEHHHHCCCCCCCEEEHEEECCCCCCCCCCEE QVGNSDWCDFGTGYYATQSFAADDGRRIVFGWYTDFPAMRVEKPCIANGMMSLPRELHVR EECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCHHEEEC DGRLTSRPVKEVYEQLLGDRLEAHADENGTFFIVPNNAYYTDMHLADDDDFTMLIATGTN CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCC SANGNSMELQLQRRDGVTRLVTKGTVVDDIDFDSGIADVRRVEIFFDRNVVEVFLNNGEA CCCCCEEEEEEECCCCCEEEEECCCEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCC AGSMLFQGADGDGEFRFVADGKVDCVDVRVLDGIWR CCEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCC >Mature Secondary Structure PDNYSVAIETGGYRLLELFAERCGDDAAVTITDGDGHQIASHVMPVAERRHRFLIPVPT CCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC NVCLTVRARQLTVRFAYLSECENLLDEGVRFISMNPYDNEWDTQPTLDQIYDRFARPAAH CEEEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHH FEPFARWMNDPNGLCRFQGRYHLFYQFNPYGFGWDNMHWGHAVSRDLVHWTHLPIFLEPQ HHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHCEEEECCCEEECCC PELHIDERIVGGAFSGSAVTVDACDNPCKGDDAAAIRLYLTRHLETRGDESSVTEYQTTC CCCEECCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEEE LCEDGVHVSVESPVALRVNDGFGFDFRDPKVETGMGGEAIDPERAYMVTATNLPVAEFDT EECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCC DAVSSAAPGISVQGTDGWFTCGPQGMPGTDKPNMDTVPAMALFSAKKPLKRNVTWQYEGP HHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCEEEECCC VLADFGHQLSRTYECPDLFQLDGKTVAIGALMHYRDKQGRFQQVRWYVGDLKDTADGPRL CHHHHHHHHHCCCCCCCCEEECCCEEEEEEHHHHCCCCCCCEEEHEEECCCCCCCCCCEE QVGNSDWCDFGTGYYATQSFAADDGRRIVFGWYTDFPAMRVEKPCIANGMMSLPRELHVR EECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCHHEEEC DGRLTSRPVKEVYEQLLGDRLEAHADENGTFFIVPNNAYYTDMHLADDDDFTMLIATGTN CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCC SANGNSMELQLQRRDGVTRLVTKGTVVDDIDFDSGIADVRRVEIFFDRNVVEVFLNNGEA CCCCCEEEEEEECCCCCEEEEECCCEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCC AGSMLFQGADGDGEFRFVADGKVDCVDVRVLDGIWR CCEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254250; 1368686 [H]