| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692900
Identifier: 213692900
GI number: 213692900
Start: 2247666
End: 2248889
Strand: Direct
Name: 213692900
Synonym: Blon_2043
Alternate gene names: NA
Gene position: 2247666-2248889 (Clockwise)
Preceding gene: 213692899
Following gene: 213692901
Centisome position: 79.35
GC content: 59.97
Gene sequence:
>1224_bases ATGGCATCTGCATCCGCCTCATTACGCCGTCGCCGGCGCGTTGAACGCATGTTCAAGCGCGCGGTAAGACGCATCAGACG GTTCTTCGCATCCTACGTCTCGCCCTTGGGCTGGGCGGTAACGGGCACAGGCATCGCATGTCTTATTGCGTTCCTGCCTC TGGACTGGCATGAGCTGCTCGTATTCGGCATCGTGGCGATGGTGATGATGCTCGCGGCAATCGCGCTTTCCCTCGGCAAC ATACGCTTCCACGCGTCCATCGCCGTATCCAATCATCGCGTGACCGTGGGAGACACCGTATCCGTTATCGTCGGCATCGA CAACACCGGCAGAACGCCGACGACCACGGCACGCGGATATCTGCCAATCGGCGATGCGCGTGAACGATTCAACATCCCCA TGCTGGCTCCCGGGCAATCCCAGCAAACCGATGTGGAGTTCCGTACCGTATCGCGCGCAATACTGCCCATCGGCCCGTTG CGCATCCGCAAGGGAGACCCGTTCGGCCTGGTGCGTCACGAAAAGGAGTTGGCCGACCGCATCACCGTATTCATCCATCC TCGTACCGTGCGTCTCGATACCCTGAATGCCGGCGTGCCCCGCGATCTGGAAGGCCAACCATCCGGCCAGATCGTGGATG ATGATCTCGACTTCTACGGATTGCGCGAATACGAGCCGGGCGACGACGTGCGTAACGTCCACTGGCTGAGCTCCGCGAAA ACCGGCACGTTGATGATTCGCCAATATGAGGCCACGCGCCGCACCGACACCTCGGTGACCATCAGCGTGAACCCGGATGA GTACGTCAACGGCGAGGAATTCGAGATGGCGGTGTCCATCCACTCCTCCATCGGCGTCAAATGCCTGCTGCAGGATCGCC CGCTGGTCTGTCACGCGGGCAACGCGCATGGCCAACCGCGCAACGCCATGGAGTTCCTCGACAACGCCAGTGCCATAGAG CCTGATCGTGAGGATAATCCGAATCTCGCCGAGGGCACGCTGAAGCACAGTCCTGATGCTTCGTTCTATTTTTTCACTGT TGGATCGCTGAAAGACATCGAGCAAATCAAGCGCATGACCTTGGCCTTGCCCCGATCGGCCAGCTGCGTGGTATTGCAGG CCAGCGCCGGCGCCAATCGCGGCATCAGAAGATTCGCCAATTTCACATTGGCCACCATCGGCGAACTCGATGATCTCCCG CTGATCATGGGGGTGCTCGCATGA
Upstream 100 bases:
>100_bases CTTCGATGGCGCGACTCCGGAAAGCCTGATCGCACAGGTGCTCGAAGACGTTCCCTCCCCCACCATCGGTTCCTGATAGG GCCTGGAAAGGTATCCGACC
Downstream 100 bases:
>100_bases CCTTCGACCAGTCCAGTATCACCACTACCAATACCGCTGCGTACGCCGGATCGAGCGGCACATACACCGGCACTTCCTCC GGCACGTACACCGGAACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MASASASLRRRRRVERMFKRAVRRIRRFFASYVSPLGWAVTGTGIACLIAFLPLDWHELLVFGIVAMVMMLAAIALSLGN IRFHASIAVSNHRVTVGDTVSVIVGIDNTGRTPTTTARGYLPIGDARERFNIPMLAPGQSQQTDVEFRTVSRAILPIGPL RIRKGDPFGLVRHEKELADRITVFIHPRTVRLDTLNAGVPRDLEGQPSGQIVDDDLDFYGLREYEPGDDVRNVHWLSSAK TGTLMIRQYEATRRTDTSVTISVNPDEYVNGEEFEMAVSIHSSIGVKCLLQDRPLVCHAGNAHGQPRNAMEFLDNASAIE PDREDNPNLAEGTLKHSPDASFYFFTVGSLKDIEQIKRMTLALPRSASCVVLQASAGANRGIRRFANFTLATIGELDDLP LIMGVLA
Sequences:
>Translated_407_residues MASASASLRRRRRVERMFKRAVRRIRRFFASYVSPLGWAVTGTGIACLIAFLPLDWHELLVFGIVAMVMMLAAIALSLGN IRFHASIAVSNHRVTVGDTVSVIVGIDNTGRTPTTTARGYLPIGDARERFNIPMLAPGQSQQTDVEFRTVSRAILPIGPL RIRKGDPFGLVRHEKELADRITVFIHPRTVRLDTLNAGVPRDLEGQPSGQIVDDDLDFYGLREYEPGDDVRNVHWLSSAK TGTLMIRQYEATRRTDTSVTISVNPDEYVNGEEFEMAVSIHSSIGVKCLLQDRPLVCHAGNAHGQPRNAMEFLDNASAIE PDREDNPNLAEGTLKHSPDASFYFFTVGSLKDIEQIKRMTLALPRSASCVVLQASAGANRGIRRFANFTLATIGELDDLP LIMGVLA >Mature_406_residues ASASASLRRRRRVERMFKRAVRRIRRFFASYVSPLGWAVTGTGIACLIAFLPLDWHELLVFGIVAMVMMLAAIALSLGNI RFHASIAVSNHRVTVGDTVSVIVGIDNTGRTPTTTARGYLPIGDARERFNIPMLAPGQSQQTDVEFRTVSRAILPIGPLR IRKGDPFGLVRHEKELADRITVFIHPRTVRLDTLNAGVPRDLEGQPSGQIVDDDLDFYGLREYEPGDDVRNVHWLSSAKT GTLMIRQYEATRRTDTSVTISVNPDEYVNGEEFEMAVSIHSSIGVKCLLQDRPLVCHAGNAHGQPRNAMEFLDNASAIEP DREDNPNLAEGTLKHSPDASFYFFTVGSLKDIEQIKRMTLALPRSASCVVLQASAGANRGIRRFANFTLATIGELDDLPL IMGVLA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44936; Mature: 44805
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASASASLRRRRRVERMFKRAVRRIRRFFASYVSPLGWAVTGTGIACLIAFLPLDWHELL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHH VFGIVAMVMMLAAIALSLGNIRFHASIAVSNHRVTVGDTVSVIVGIDNTGRTPTTTARGY HHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCEEEECCEEEEEEEECCCCCCCCCCCCCC LPIGDARERFNIPMLAPGQSQQTDVEFRTVSRAILPIGPLRIRKGDPFGLVRHEKELADR EECCCCHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCE ITVFIHPRTVRLDTLNAGVPRDLEGQPSGQIVDDDLDFYGLREYEPGDDVRNVHWLSSAK EEEEECCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCC TGTLMIRQYEATRRTDTSVTISVNPDEYVNGEEFEMAVSIHSSIGVKCLLQDRPLVCHAG CCEEEEEEEHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECC NAHGQPRNAMEFLDNASAIEPDREDNPNLAEGTLKHSPDASFYFFTVGSLKDIEQIKRMT CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH LALPRSASCVVLQASAGANRGIRRFANFTLATIGELDDLPLIMGVLA HCCCCCCCEEEEEECCCCCHHHHHHHCCHHEECCCCCCCHHHHHHCC >Mature Secondary Structure ASASASLRRRRRVERMFKRAVRRIRRFFASYVSPLGWAVTGTGIACLIAFLPLDWHELL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHH VFGIVAMVMMLAAIALSLGNIRFHASIAVSNHRVTVGDTVSVIVGIDNTGRTPTTTARGY HHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCEEEECCEEEEEEEECCCCCCCCCCCCCC LPIGDARERFNIPMLAPGQSQQTDVEFRTVSRAILPIGPLRIRKGDPFGLVRHEKELADR EECCCCHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCE ITVFIHPRTVRLDTLNAGVPRDLEGQPSGQIVDDDLDFYGLREYEPGDDVRNVHWLSSAK EEEEECCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCC TGTLMIRQYEATRRTDTSVTISVNPDEYVNGEEFEMAVSIHSSIGVKCLLQDRPLVCHAG CCEEEEEEEHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECC NAHGQPRNAMEFLDNASAIEPDREDNPNLAEGTLKHSPDASFYFFTVGSLKDIEQIKRMT CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH LALPRSASCVVLQASAGANRGIRRFANFTLATIGELDDLPLIMGVLA HCCCCCCCEEEEEECCCCCHHHHHHHCCHHEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA