| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692901
Identifier: 213692901
GI number: 213692901
Start: 2248886
End: 2251399
Strand: Direct
Name: 213692901
Synonym: Blon_2044
Alternate gene names: NA
Gene position: 2248886-2251399 (Clockwise)
Preceding gene: 213692900
Following gene: 213692902
Centisome position: 79.39
GC content: 59.15
Gene sequence:
>2514_bases ATGACCTTCGACCAGTCCAGTATCACCACTACCAATACCGCTGCGTACGCCGGATCGAGCGGCACATACACCGGCACTTC CTCCGGCACGTACACCGGAACCTCCACCACCACCGGCTCCTGGGCCGACTCCACACATTCGGTTATCTGGATGACCAGAG GCAATGTGCTTCGCGGCATGGGCCTCAGTCGCCAGCCGTGGGGCAAACGAATCGCCAGCCTTGTACTCATAGCGGCGATG ATGTTGCTGGCGCAAGCCAATCTCATCGACGTGTACGGCGGCGTGGCCACTTGGACGATTGCCGCCGTACCGGCCACCTT GCTGGGCGCGATCATCGCTCTGGTGGGCATGTTGCCGGCGTTGCGACTGTGGTGGCAAATCGTGTTTCTGGCGTTTGCCC AATTCATCATCGGTCCGGTGGTAACGCTGAGTTCCACCACGTCCCATTACGTGATTCCCACCTTGAAGACCTTGAGTTCA GGTTGGGAAATGACGTTTGGCTCGTTCAAGTACATTATTTCCGTCGATCCGCCTCTGGGCACGCAAGACGGCGTACTGAT GGCGGTATGGACCATCGGCCTGTGGCTTACGTTCCTCACCGGCGTGTTTGCCATTAATGCCAACGCATGGTTGTCTCTGG TGGGAGTGCCGCCCCTTGCGGCGGCCGTGGCCGTATGTGCTCTGCTGGGTACGGACAGCGGCTGGCAACGTGCCATCTGC GGCATTGCCTTTGCCTTGCTGCTGATTATCTGGCTGTCTTGGCGTCTTGAACTGCTGGAATGGGGGCGCTGGATATCCGC GCTGATCATCGTCGTGCTCGCTGCCGGCCTTGCTTTCGGGGGCACGTTGCTGGTGCCGCAGGACCGTTTCGTGCTGCGTG ACCGCTACGATCCGCCGTTAAGCCCCTACGATTACACCAGCCCGCTCAGCGGCATGCGATCCTATATCAAGGACCACAAA AAAGACGTGTTGCTGACCGTCCATAATCTACCGGCCGGAACACCGGTCAAACTTGCGGTGATGGATCGATTCGACGGCAC AGTATGGAACCTGTCCGATTCTTCCGAAGCCACGGGCTCCTCGAATTATCATCGCGTGGGCACCACGATCAAGGCGGATG AGCAGGGTAAATCCTTCACTGCGACCTTCACCGTCGATCAGGGACTGACCGACACCTGGCTGCCGCTGGCGGGAGCGGCC GCTGGCGTGAGCTTCGCCAACGATGCCGACAACGGCAATGACACGTTCTACTACAACACGGATACCGATTCCGCCATTAT TCCCGCCGGCACGCGCAAGGGACTCACCTATACCGAATCCGGCATCATAGCCCACAAGCCCACCGATAAGCAGATCAGCA GTGCGGCCGCGGCCCGCATCACGCAGCCTTCAGCCCAGGATGTTCCCGATTCGGCCAGCAAACTGGCCACGTCCATTGCC GGCGGACAGTCCTCGGGCGGTGCCGCCGCCACGGCCTTGGCCGACACATTGAAAGACTCCGGATGGTTCTCACACGGTCT GGAAGGCGATTATCCTTCCGATGCGGGCCATGGCAATTACCGTATCAACAAGCTGCTGGCAGGCACGGCCATGGTGGGTG ATTCCGAACAATATGCCTCCGCCATGGCACTGATGGCTCGTGAGCTGGGACTGCCCTCCCGTGTGGTCCTGGGATTCCTG CCGAAAAACGAGGATGGCGAAATCACCGATGCCCGCACGGAGAAGACTTCAGGCAATGGCACCAAAATCGAATTCACCGG CAATGATGTGACCGCTTGGGTGGAAATCAAATTGCAAGGCCTGGGATGGGTGGCGTTCTATCCGACGCCCAAGGAGACCA AGGTGCCTGATGAAAACCAGAACCTGACGCCGCCGAATCCGCAGACACTGGTCCGGCAACCACCAGTGCCGTTGACCGAC CCGCTGCGCGATCAGACGCAGGCCAAAGGCCAGAGTTCGTTGGCCGGTACCGACGCCGATGATTCGCCGACCAACCTGTT CTGGGTGCGGTTCTGGCGAGTTACTCGTGCGGTAGCCATCTATGGAAGCCCCCTGTGGACTCTGCTCATCGTTTGCGGAC TAATCCTGATATTTAAAGCTGCATTGCTGGCACGTGCACGACGGCACGGCAGTCCGAAAGCCCGTGTGGCAGCGGGGTGG AATGCCATACACATACTTGCCGAGCAAAGCGGCATCACAGCCAAGGGCACTCGTCGCGATCAGGCCGGCGCAATCGCCCG TCAGCTCGGCACGGACGATCAGGCACTGATTCAACTCGGTCGGGAAGCCGACTACGCCACGTTCTCGGGGCAAGACATTG CATCGGGCCAAGCCACCACATATTGGAATGGAGTCGACCGGTTGCGCAAGGCAATGCTCGCTTCTTTGCCGCGTTTCAGG AGGATACGTACACGGCTTTCGCTGAAAAGCGTGTCTATATTGGCAAATAGACACGCAGCAAAGCCGCATACAGCGCGAGT CAAGCGCAAGCATAAGAAGAGGAAAACGTCATGA
Upstream 100 bases:
>100_bases CCAGCGCCGGCGCCAATCGCGGCATCAGAAGATTCGCCAATTTCACATTGGCCACCATCGGCGAACTCGATGATCTCCCG CTGATCATGGGGGTGCTCGC
Downstream 100 bases:
>100_bases CCACAGGTTCCATCCGTGTCGCGATGACCAGTGACGTGGGTCTTAGGCGCAACAACAACCAAGACAGGAAGCCGTGGACG CCTTGGTGGCGGCCGCGCTC
Product: transglutaminase domain protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Protease Transglutaminase-Like; Transglutaminase-Like Cysteine Protease; Na+-Driven Multidrug Efflux Pump; Transglutaminase-Like Cysteine Protease
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAM MLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSS GWEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHK KDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAA AGVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFL PKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTD PLRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFR RIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS
Sequences:
>Translated_837_residues MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAM MLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSS GWEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHK KDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAA AGVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFL PKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTD PLRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFR RIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS >Mature_836_residues TFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAMM LLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSG WEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAICG IAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHKK DVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAA GVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIAG GQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFLP KNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDP LRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGWN AIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFRR IRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89853; Mature: 89722
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGM CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC GLSRQPWGKRIASLVLIAAMMLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPA CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSGWEMTFGSFKYIISVDPPLG HHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHCCCCCEECCCEEEEEEECCCCC TQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHH GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC SPYDYTSPLSGMRSYIKDHKKDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGS CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCC SNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAAGVSFANDADNGNDTFYYNT CCCEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC DTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA CCCCEEECCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYAS CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHEEECCEEECCCHHHHH AMALMARELGLPSRVVLGFLPKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQG HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC LGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDQTQAKGQSSLAGTDAD CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC DSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW CCCCCEEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATT CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCCCCEE YWNGVDRLRKAMLASLPRFRRIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS EEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGM CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC GLSRQPWGKRIASLVLIAAMMLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPA CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSGWEMTFGSFKYIISVDPPLG HHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHCCCCCEECCCEEEEEEECCCCC TQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHH GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC SPYDYTSPLSGMRSYIKDHKKDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGS CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCC SNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAAGVSFANDADNGNDTFYYNT CCCEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC DTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA CCCCEEECCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYAS CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHEEECCEEECCCHHHHH AMALMARELGLPSRVVLGFLPKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQG HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC LGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDQTQAKGQSSLAGTDAD CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC DSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW CCCCCEEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATT CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCCCCEE YWNGVDRLRKAMLASLPRFRRIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS EEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA