Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692901

Identifier: 213692901

GI number: 213692901

Start: 2248886

End: 2251399

Strand: Direct

Name: 213692901

Synonym: Blon_2044

Alternate gene names: NA

Gene position: 2248886-2251399 (Clockwise)

Preceding gene: 213692900

Following gene: 213692902

Centisome position: 79.39

GC content: 59.15

Gene sequence:

>2514_bases
ATGACCTTCGACCAGTCCAGTATCACCACTACCAATACCGCTGCGTACGCCGGATCGAGCGGCACATACACCGGCACTTC
CTCCGGCACGTACACCGGAACCTCCACCACCACCGGCTCCTGGGCCGACTCCACACATTCGGTTATCTGGATGACCAGAG
GCAATGTGCTTCGCGGCATGGGCCTCAGTCGCCAGCCGTGGGGCAAACGAATCGCCAGCCTTGTACTCATAGCGGCGATG
ATGTTGCTGGCGCAAGCCAATCTCATCGACGTGTACGGCGGCGTGGCCACTTGGACGATTGCCGCCGTACCGGCCACCTT
GCTGGGCGCGATCATCGCTCTGGTGGGCATGTTGCCGGCGTTGCGACTGTGGTGGCAAATCGTGTTTCTGGCGTTTGCCC
AATTCATCATCGGTCCGGTGGTAACGCTGAGTTCCACCACGTCCCATTACGTGATTCCCACCTTGAAGACCTTGAGTTCA
GGTTGGGAAATGACGTTTGGCTCGTTCAAGTACATTATTTCCGTCGATCCGCCTCTGGGCACGCAAGACGGCGTACTGAT
GGCGGTATGGACCATCGGCCTGTGGCTTACGTTCCTCACCGGCGTGTTTGCCATTAATGCCAACGCATGGTTGTCTCTGG
TGGGAGTGCCGCCCCTTGCGGCGGCCGTGGCCGTATGTGCTCTGCTGGGTACGGACAGCGGCTGGCAACGTGCCATCTGC
GGCATTGCCTTTGCCTTGCTGCTGATTATCTGGCTGTCTTGGCGTCTTGAACTGCTGGAATGGGGGCGCTGGATATCCGC
GCTGATCATCGTCGTGCTCGCTGCCGGCCTTGCTTTCGGGGGCACGTTGCTGGTGCCGCAGGACCGTTTCGTGCTGCGTG
ACCGCTACGATCCGCCGTTAAGCCCCTACGATTACACCAGCCCGCTCAGCGGCATGCGATCCTATATCAAGGACCACAAA
AAAGACGTGTTGCTGACCGTCCATAATCTACCGGCCGGAACACCGGTCAAACTTGCGGTGATGGATCGATTCGACGGCAC
AGTATGGAACCTGTCCGATTCTTCCGAAGCCACGGGCTCCTCGAATTATCATCGCGTGGGCACCACGATCAAGGCGGATG
AGCAGGGTAAATCCTTCACTGCGACCTTCACCGTCGATCAGGGACTGACCGACACCTGGCTGCCGCTGGCGGGAGCGGCC
GCTGGCGTGAGCTTCGCCAACGATGCCGACAACGGCAATGACACGTTCTACTACAACACGGATACCGATTCCGCCATTAT
TCCCGCCGGCACGCGCAAGGGACTCACCTATACCGAATCCGGCATCATAGCCCACAAGCCCACCGATAAGCAGATCAGCA
GTGCGGCCGCGGCCCGCATCACGCAGCCTTCAGCCCAGGATGTTCCCGATTCGGCCAGCAAACTGGCCACGTCCATTGCC
GGCGGACAGTCCTCGGGCGGTGCCGCCGCCACGGCCTTGGCCGACACATTGAAAGACTCCGGATGGTTCTCACACGGTCT
GGAAGGCGATTATCCTTCCGATGCGGGCCATGGCAATTACCGTATCAACAAGCTGCTGGCAGGCACGGCCATGGTGGGTG
ATTCCGAACAATATGCCTCCGCCATGGCACTGATGGCTCGTGAGCTGGGACTGCCCTCCCGTGTGGTCCTGGGATTCCTG
CCGAAAAACGAGGATGGCGAAATCACCGATGCCCGCACGGAGAAGACTTCAGGCAATGGCACCAAAATCGAATTCACCGG
CAATGATGTGACCGCTTGGGTGGAAATCAAATTGCAAGGCCTGGGATGGGTGGCGTTCTATCCGACGCCCAAGGAGACCA
AGGTGCCTGATGAAAACCAGAACCTGACGCCGCCGAATCCGCAGACACTGGTCCGGCAACCACCAGTGCCGTTGACCGAC
CCGCTGCGCGATCAGACGCAGGCCAAAGGCCAGAGTTCGTTGGCCGGTACCGACGCCGATGATTCGCCGACCAACCTGTT
CTGGGTGCGGTTCTGGCGAGTTACTCGTGCGGTAGCCATCTATGGAAGCCCCCTGTGGACTCTGCTCATCGTTTGCGGAC
TAATCCTGATATTTAAAGCTGCATTGCTGGCACGTGCACGACGGCACGGCAGTCCGAAAGCCCGTGTGGCAGCGGGGTGG
AATGCCATACACATACTTGCCGAGCAAAGCGGCATCACAGCCAAGGGCACTCGTCGCGATCAGGCCGGCGCAATCGCCCG
TCAGCTCGGCACGGACGATCAGGCACTGATTCAACTCGGTCGGGAAGCCGACTACGCCACGTTCTCGGGGCAAGACATTG
CATCGGGCCAAGCCACCACATATTGGAATGGAGTCGACCGGTTGCGCAAGGCAATGCTCGCTTCTTTGCCGCGTTTCAGG
AGGATACGTACACGGCTTTCGCTGAAAAGCGTGTCTATATTGGCAAATAGACACGCAGCAAAGCCGCATACAGCGCGAGT
CAAGCGCAAGCATAAGAAGAGGAAAACGTCATGA

Upstream 100 bases:

>100_bases
CCAGCGCCGGCGCCAATCGCGGCATCAGAAGATTCGCCAATTTCACATTGGCCACCATCGGCGAACTCGATGATCTCCCG
CTGATCATGGGGGTGCTCGC

Downstream 100 bases:

>100_bases
CCACAGGTTCCATCCGTGTCGCGATGACCAGTGACGTGGGTCTTAGGCGCAACAACAACCAAGACAGGAAGCCGTGGACG
CCTTGGTGGCGGCCGCGCTC

Product: transglutaminase domain protein

Products: NA

Alternate protein names: Transglutaminase Domain Protein; Protease Transglutaminase-Like; Transglutaminase-Like Cysteine Protease; Na+-Driven Multidrug Efflux Pump; Transglutaminase-Like Cysteine Protease

Number of amino acids: Translated: 837; Mature: 836

Protein sequence:

>837_residues
MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAM
MLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSS
GWEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC
GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHK
KDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAA
AGVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA
GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFL
PKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTD
PLRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW
NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFR
RIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS

Sequences:

>Translated_837_residues
MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAM
MLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSS
GWEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC
GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHK
KDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAA
AGVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA
GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFL
PKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTD
PLRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW
NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFR
RIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS
>Mature_836_residues
TFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGMGLSRQPWGKRIASLVLIAAMM
LLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPALRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSG
WEMTFGSFKYIISVDPPLGTQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAICG
IAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPLSPYDYTSPLSGMRSYIKDHKK
DVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGSSNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAA
GVSFANDADNGNDTFYYNTDTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIAG
GQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYASAMALMARELGLPSRVVLGFLP
KNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQGLGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDP
LRDQTQAKGQSSLAGTDADDSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGWN
AIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATTYWNGVDRLRKAMLASLPRFRR
IRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89853; Mature: 89722

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGM
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC
GLSRQPWGKRIASLVLIAAMMLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSGWEMTFGSFKYIISVDPPLG
HHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHCCCCCEECCCEEEEEEECCCCC
TQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHH
GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
SPYDYTSPLSGMRSYIKDHKKDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGS
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCC
SNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAAGVSFANDADNGNDTFYYNT
CCCEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
DTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA
CCCCEEECCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYAS
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHEEECCEEECCCHHHHH
AMALMARELGLPSRVVLGFLPKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQG
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC
LGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDQTQAKGQSSLAGTDAD
CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
DSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW
CCCCCEEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATT
CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCCCCEE
YWNGVDRLRKAMLASLPRFRRIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS
EEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFDQSSITTTNTAAYAGSSGTYTGTSSGTYTGTSTTTGSWADSTHSVIWMTRGNVLRGM
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECC
GLSRQPWGKRIASLVLIAAMMLLAQANLIDVYGGVATWTIAAVPATLLGAIIALVGMLPA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLWWQIVFLAFAQFIIGPVVTLSSTTSHYVIPTLKTLSSGWEMTFGSFKYIISVDPPLG
HHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHCCCCCEECCCEEEEEEECCCCC
TQDGVLMAVWTIGLWLTFLTGVFAINANAWLSLVGVPPLAAAVAVCALLGTDSGWQRAIC
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHH
GIAFALLLIIWLSWRLELLEWGRWISALIIVVLAAGLAFGGTLLVPQDRFVLRDRYDPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
SPYDYTSPLSGMRSYIKDHKKDVLLTVHNLPAGTPVKLAVMDRFDGTVWNLSDSSEATGS
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCC
SNYHRVGTTIKADEQGKSFTATFTVDQGLTDTWLPLAGAAAGVSFANDADNGNDTFYYNT
CCCEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
DTDSAIIPAGTRKGLTYTESGIIAHKPTDKQISSAAAARITQPSAQDVPDSASKLATSIA
CCCCEEECCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
GGQSSGGAAATALADTLKDSGWFSHGLEGDYPSDAGHGNYRINKLLAGTAMVGDSEQYAS
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHEEECCEEECCCHHHHH
AMALMARELGLPSRVVLGFLPKNEDGEITDARTEKTSGNGTKIEFTGNDVTAWVEIKLQG
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC
LGWVAFYPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDQTQAKGQSSLAGTDAD
CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
DSPTNLFWVRFWRVTRAVAIYGSPLWTLLIVCGLILIFKAALLARARRHGSPKARVAAGW
CCCCCEEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NAIHILAEQSGITAKGTRRDQAGAIARQLGTDDQALIQLGREADYATFSGQDIASGQATT
CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCCCCEE
YWNGVDRLRKAMLASLPRFRRIRTRLSLKSVSILANRHAAKPHTARVKRKHKKRKTS
EEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA