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The map label for this gene is 213692892

Identifier: 213692892

GI number: 213692892

Start: 2224704

End: 2226404

Strand: Reverse

Name: 213692892

Synonym: Blon_2033

Alternate gene names: NA

Gene position: 2226404-2224704 (Counterclockwise)

Preceding gene: 213692893

Following gene: 213692891

Centisome position: 78.6

GC content: 63.96

Gene sequence:

>1701_bases
GTGCTGATCGCCCCGCCGAAGTACCGCAAGGGCTCCATGCGCATCACACCGCTCGGCGGCTTGGGCGAAATCGGCCGCAA
CATGAACGTGATCGAATACAACGGTCACCTGCTGCTCATCGACTGCGGCGTGCTCTTCCCCGAGGAGGAGCAGCCGGGCG
TGGATCTCATCCTGCCCGATTTCAGCTACATCAAGAACCGTCTCGACAAGGTCGACGCCCTGGTGCTCACCCACGGCCAC
GAGGACCACATCGGCGGCGTGCCCTACCTGCTGAAGCTGCGCCCGGACATCCCGCTGATCGGCTCCAAGCTGACCCTCGC
CTTCGTGGACGCCAAGTGCAAGGAACACCACCAGAACCCCACCAAGGTTGAGGTTGCCGGCCGTGAGAAGCTCAAGGTGG
GCCCCTTCGACCTCGAATTCGTCAACGTCACCCACTCCATCCCGGACGCCCTGGCCGTCTATGTCAAGACCCCGGCCGGC
TCCCTGATCGACACGGGCGATATCAAGCTCGACCAGCTGCCGCTCGACCACCGCATCACCGACCTCGTCGAATTCGGCAA
GATCGGCGAAAAGGGCGTGGACCTGCTGATGATGGACTCCACCAACGCCGAGGTGCCCGGCTTCGTCAAGCCCGAGACCT
CCATCGGCCCGGCCCTTGACCAAGCGTTCGCCCAGGCCACCCGCAAGATCATCGTCGCCAGCTTCTCCTCCCACGTGCAC
CGTGTGCAGCAGGTGGTGGACGCCGCCCACAAGTACGGCCGCAAGGTCGTGTTCGTCGGCCGTTCGATGGTGCGCAACAT
GTCCATCGCCGCCGACCTGGGATACCTGCACATCCCCGAAGGCACCGTCGTGGACCTGAGGCAGGCCAACGACATTCAGG
ATGACAAGCTCGTCTTCATGTGCACCGGCTCCCAAGGCGAGCCGATGGCCGCACTCGGCCGCATCGCGGACGGCAACCAC
CGCGACATCCACATCAACGAGTTCGACACCGTGATCCTCGCCAGCTCCCTGATCCCGGGCAACGAGCACGGCGTCTACAA
AGTGATCAACAAGCTCGTGCAGCTCGGCGCCAAGGTCGTCAACCGCGACAACGCGGCCGTGCACGTGTCTGGTCACTGCA
ACGAGGGCGAGCTGCTGTACATGTACAACATCGTCAAGCCCAAGTGTGCCATGCCGATCCACGGCGAAAACCGCCACCTG
GTGGCCAACGGCCTGATCGCCGTCAAGACCGGCGTGGACCCGCAGAACGTGGTCTTGGCCGAAGACGGCGATGTGGTCGA
CCTCTACCACGGCAAGGCCGCGGTCGTCGGCTCCGTGCCGTGCGGCTACGTGTACGTCGATGGCGATTCCGTCGGCGAGC
TGACCGACGAGGAGCTGGAGAAGCGCCGCATTCTCGGCACCGAGGGCTTCGTCTCCGCGTTCGTGGTGGTCGACACCGAC
AACCAGGAGGTCGTCACCGGCCCGAAGATCTACCTGAACGCCGTGGCCGAGGACGAAAGCGAGTTCGACAAGGTCCGTCA
CCAGATCGTCGAACAGCTCAACGACCAGATGATGCAGGGCACGCGCGACACCTACAAGCTGCAGCAGACCATGCGCCGTA
CGCTCGGCAGCTGGGTTGCACGCCAGCTGCACCGCAAGCCGATGATCGTGCCCGTCGTGGCCGACATCGCCCAGGACGTC
GAAACCGTAGAAACCAAGTAG

Upstream 100 bases:

>100_bases
CGGTTCCGCGCGCGGCCGCAACGCCAACGGATCCAACAGCCGTACGCCGTCCCGTAAGATCAACGCCACCCGGCAGGCCA
CCGCACCTCAGCAGGATGCC

Downstream 100 bases:

>100_bases
TCCGGATTATCCAGGGACGACCGTAAGGAGTAATTGAAGTCATGCCCGGTTCGAATCTCACTCGTATTGAAGCCGAAGAA
CGTAAGGCCGTTATCGAAGC

Product: beta-lactamase domain protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MLIAPPKYRKGSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPDFSYIKNRLDKVDALVLTHGH
EDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAG
SLIDTGDIKLDQLPLDHRITDLVEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVH
RVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFMCTGSQGEPMAALGRIADGNH
RDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHL
VANGLIAVKTGVDPQNVVLAEDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTD
NQEVVTGPKIYLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVARQLHRKPMIVPVVADIAQDV
ETVETK

Sequences:

>Translated_566_residues
MLIAPPKYRKGSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPDFSYIKNRLDKVDALVLTHGH
EDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAG
SLIDTGDIKLDQLPLDHRITDLVEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVH
RVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFMCTGSQGEPMAALGRIADGNH
RDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHL
VANGLIAVKTGVDPQNVVLAEDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTD
NQEVVTGPKIYLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVARQLHRKPMIVPVVADIAQDV
ETVETK
>Mature_566_residues
MLIAPPKYRKGSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPDFSYIKNRLDKVDALVLTHGH
EDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAG
SLIDTGDIKLDQLPLDHRITDLVEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVH
RVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFMCTGSQGEPMAALGRIADGNH
RDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHL
VANGLIAVKTGVDPQNVVLAEDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTD
NQEVVTGPKIYLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVARQLHRKPMIVPVVADIAQDV
ETVETK

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 62157; Mature: 62157

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAPPKYRKGSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPD
CCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCEEEEEECCEECCCCCCCCCEEEECC
FSYIKNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP
HHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHCCCC
TKVEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRIT
CEEEECCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCEEEECCCCCHHHH
DLVEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVH
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHH
RVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFM
HHHHHHHHHHHHCCEEEEECHHHHHCCEEEECCCEEECCCCCEEEECCCCCCCCCCEEEE
CTGSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV
EECCCCCCHHHHHCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHH
NRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLA
CCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEE
EDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTD
CCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECC
NQEVVTGPKIYLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVA
CCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RQLHRKPMIVPVVADIAQDVETVETK
HHHHCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIAPPKYRKGSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPD
CCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCEEEEEECCEECCCCCCCCCEEEECC
FSYIKNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP
HHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHCCCC
TKVEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRIT
CEEEECCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCEEEECCCCCHHHH
DLVEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVH
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHH
RVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFM
HHHHHHHHHHHHCCEEEEECHHHHHCCEEEECCCEEECCCCCEEEECCCCCCCCCCEEEE
CTGSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV
EECCCCCCHHHHHCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHH
NRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLA
CCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEE
EDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTD
CCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECC
NQEVVTGPKIYLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVA
CCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RQLHRKPMIVPVVADIAQDVETVETK
HHHHCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]