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The map label for this gene is 213692888

Identifier: 213692888

GI number: 213692888

Start: 2218308

End: 2219786

Strand: Reverse

Name: 213692888

Synonym: Blon_2029

Alternate gene names: NA

Gene position: 2219786-2218308 (Counterclockwise)

Preceding gene: 213692889

Following gene: 213692886

Centisome position: 78.36

GC content: 64.44

Gene sequence:

>1479_bases
ATGACCGACCGCGCATGGTTCGACGCCGCCAAGGGAGACATTCCCCAATGGGCGGCGGCTATGCCCAAGGACGCCGATGG
CACCACCATCGACTGGGACTGGGTGCGTTCTCTGGACCTGGCGCATGGCGTCGGCACGATACCGGAATCCACCCCACGGT
CCATCCACGACGCATTGAAGGCCGACTACGCCACACGCGAGCGTCTGGAATCGATCATCGCCCAATGCAACAGCGCATTC
ATGACCGATTTCGACCGGCTCATCGGCTCCTATCGTCTGCCTCGTGCGCTCGCCTACGCCAATCGCCGGCTCAACGACAA
CATCAACACGATGTTGCATCTGGGCGAACAGCAACACCTATGGGCGGTCAGTCGCGAACGGCGGGGGAGGGCCACCATTG
CCGTGCTCAAGCCGTACTCCGGCAGCGGCCCGTCGAACGATGACCAAGGCATGCTGGATCTGAGCGGCGAAGCCGGTGGC
GCATCTGCCGGAAATACTGCCGCCGAAAACAGCGATGTCAAGTTCCCCACAACAGTCGCCTTGGACGATATCCAAGATCG
TACGGAGGCGATTCTTGACGCACGCGCCAAACGGCGTAAGGCCCAGCGCTTCCAGAAGCGTGCGGGCGATGCGGCGATGG
CCCGCGCCAATCTCTCCGGCGCGACTTCGCCGGGTGGTGCCGCTCTGCCGGGTGGCGCCGCCGCGTCTGGCAACGCTACC
GGACACCATCCCAAGCCCGACTGGCGCGACGCCTATCTGCCCGGCCGCGACGTGGACGCGGTGATGGGCATCGACATCGA
AACCACCGGCATCGATCCGGCGCGTGACTACATCATCGACGTCGGCTTCGAATTCATGAACATGGCCAGTCCGCGCCCGG
CCGGCGAACCCGAGACATACGCCTATGAGCAGGGCTATTATGCCGCCGGCGACGCCTACGGCCAGTCTCGTCTCGCTTTT
GGCGTGCCGCCGGAAAACGCGGCGCTCGGCAACGCCCTCATCGCCAAACTCACCGGCATCGATGTACGCGGCCGCAGCAG
CGAGGCCGGGTATCGACTCTTCGACGAATGGCCCCAAGCCCAGGCCGGCCTGCTCGCGCGGCTTATCCAGCAGCCGTACG
TGGCGCATAACGCCACCTTCGAACATAGCTGGTTCATGCTGAACGTCGCCGGATATGCGGAAAGCTACCGTGCCGGGCGC
ATCACCATCATCGACACCCTGCCGATGAGCCGGCAGTGGGACCCCGGCGCGGTGCCCACCAACGAGCATCCTTACGGAGA
CAACACGCTCGACGCCTACGCCAAACGTCAGGATGCGCTTGATTCCGCCCACAACGAACGCCACTTGGGCCTTGAGGATT
CGCACATCATGCTGGTGGCCATGAAACACCATCTGGCGGCGCTGAAAGCGCAAGGGAAAGGGCCGTGGGGGCCCGCCGGC
AGGGCTGGCGTCGGCGGCAAGTCTTGCCGTTCTCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGAAATCCGTTCGCTGACCACCAACGAGAACCTCGAGGACTATTGGTGCGACGACCCGGTGCCCACCGAGGCCGCT
GAAGAGCTCGGTTTCGCACT

Downstream 100 bases:

>100_bases
ACATGTGGAGCAGCAGTTACAGACAGAACGACATGTACAGGGGAAGCAAACGGCGATGGTCTTTCTTCGCCATGGGGCGT
GGGTGGAGCACGTATTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase III Epsilon Subunit-Like 3-5' Exonuclease; DNAQ DNA Polymerase III Alpha Subunit; DNA Polymerase III Epsilon Subunit

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTDRAWFDAAKGDIPQWAAAMPKDADGTTIDWDWVRSLDLAHGVGTIPESTPRSIHDALKADYATRERLESIIAQCNSAF
MTDFDRLIGSYRLPRALAYANRRLNDNINTMLHLGEQQHLWAVSRERRGRATIAVLKPYSGSGPSNDDQGMLDLSGEAGG
ASAGNTAAENSDVKFPTTVALDDIQDRTEAILDARAKRRKAQRFQKRAGDAAMARANLSGATSPGGAALPGGAAASGNAT
GHHPKPDWRDAYLPGRDVDAVMGIDIETTGIDPARDYIIDVGFEFMNMASPRPAGEPETYAYEQGYYAAGDAYGQSRLAF
GVPPENAALGNALIAKLTGIDVRGRSSEAGYRLFDEWPQAQAGLLARLIQQPYVAHNATFEHSWFMLNVAGYAESYRAGR
ITIIDTLPMSRQWDPGAVPTNEHPYGDNTLDAYAKRQDALDSAHNERHLGLEDSHIMLVAMKHHLAALKAQGKGPWGPAG
RAGVGGKSCRSR

Sequences:

>Translated_492_residues
MTDRAWFDAAKGDIPQWAAAMPKDADGTTIDWDWVRSLDLAHGVGTIPESTPRSIHDALKADYATRERLESIIAQCNSAF
MTDFDRLIGSYRLPRALAYANRRLNDNINTMLHLGEQQHLWAVSRERRGRATIAVLKPYSGSGPSNDDQGMLDLSGEAGG
ASAGNTAAENSDVKFPTTVALDDIQDRTEAILDARAKRRKAQRFQKRAGDAAMARANLSGATSPGGAALPGGAAASGNAT
GHHPKPDWRDAYLPGRDVDAVMGIDIETTGIDPARDYIIDVGFEFMNMASPRPAGEPETYAYEQGYYAAGDAYGQSRLAF
GVPPENAALGNALIAKLTGIDVRGRSSEAGYRLFDEWPQAQAGLLARLIQQPYVAHNATFEHSWFMLNVAGYAESYRAGR
ITIIDTLPMSRQWDPGAVPTNEHPYGDNTLDAYAKRQDALDSAHNERHLGLEDSHIMLVAMKHHLAALKAQGKGPWGPAG
RAGVGGKSCRSR
>Mature_491_residues
TDRAWFDAAKGDIPQWAAAMPKDADGTTIDWDWVRSLDLAHGVGTIPESTPRSIHDALKADYATRERLESIIAQCNSAFM
TDFDRLIGSYRLPRALAYANRRLNDNINTMLHLGEQQHLWAVSRERRGRATIAVLKPYSGSGPSNDDQGMLDLSGEAGGA
SAGNTAAENSDVKFPTTVALDDIQDRTEAILDARAKRRKAQRFQKRAGDAAMARANLSGATSPGGAALPGGAAASGNATG
HHPKPDWRDAYLPGRDVDAVMGIDIETTGIDPARDYIIDVGFEFMNMASPRPAGEPETYAYEQGYYAAGDAYGQSRLAFG
VPPENAALGNALIAKLTGIDVRGRSSEAGYRLFDEWPQAQAGLLARLIQQPYVAHNATFEHSWFMLNVAGYAESYRAGRI
TIIDTLPMSRQWDPGAVPTNEHPYGDNTLDAYAKRQDALDSAHNERHLGLEDSHIMLVAMKHHLAALKAQGKGPWGPAGR
AGVGGKSCRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53242; Mature: 53111

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRAWFDAAKGDIPQWAAAMPKDADGTTIDWDWVRSLDLAHGVGTIPESTPRSIHDALK
CCCCCHHCCCCCCCCHHHHCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ADYATRERLESIIAQCNSAFMTDFDRLIGSYRLPRALAYANRRLNDNINTMLHLGEQQHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEECCCHHHH
WAVSRERRGRATIAVLKPYSGSGPSNDDQGMLDLSGEAGGASAGNTAAENSDVKFPTTVA
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
LDDIQDRTEAILDARAKRRKAQRFQKRAGDAAMARANLSGATSPGGAALPGGAAASGNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GHHPKPDWRDAYLPGRDVDAVMGIDIETTGIDPARDYIIDVGFEFMNMASPRPAGEPETY
CCCCCCCCCCCCCCCCCCCEEEECEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCE
AYEQGYYAAGDAYGQSRLAFGVPPENAALGNALIAKLTGIDVRGRSSEAGYRLFDEWPQA
EECCCEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCEECCCCCCCCCHHHHHCCCH
QAGLLARLIQQPYVAHNATFEHSWFMLNVAGYAESYRAGRITIIDTLPMSRQWDPGAVPT
HHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCHHHCCCCEEEEEECCCCCCCCCCCCCCC
NEHPYGDNTLDAYAKRQDALDSAHNERHLGLEDSHIMLVAMKHHLAALKAQGKGPWGPAG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCC
RAGVGGKSCRSR
CCCCCCHHHCCC
>Mature Secondary Structure 
TDRAWFDAAKGDIPQWAAAMPKDADGTTIDWDWVRSLDLAHGVGTIPESTPRSIHDALK
CCCCHHCCCCCCCCHHHHCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ADYATRERLESIIAQCNSAFMTDFDRLIGSYRLPRALAYANRRLNDNINTMLHLGEQQHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEECCCHHHH
WAVSRERRGRATIAVLKPYSGSGPSNDDQGMLDLSGEAGGASAGNTAAENSDVKFPTTVA
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
LDDIQDRTEAILDARAKRRKAQRFQKRAGDAAMARANLSGATSPGGAALPGGAAASGNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GHHPKPDWRDAYLPGRDVDAVMGIDIETTGIDPARDYIIDVGFEFMNMASPRPAGEPETY
CCCCCCCCCCCCCCCCCCCEEEECEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCE
AYEQGYYAAGDAYGQSRLAFGVPPENAALGNALIAKLTGIDVRGRSSEAGYRLFDEWPQA
EECCCEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCEECCCCCCCCCHHHHHCCCH
QAGLLARLIQQPYVAHNATFEHSWFMLNVAGYAESYRAGRITIIDTLPMSRQWDPGAVPT
HHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCHHHCCCCEEEEEECCCCCCCCCCCCCCC
NEHPYGDNTLDAYAKRQDALDSAHNERHLGLEDSHIMLVAMKHHLAALKAQGKGPWGPAG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCC
RAGVGGKSCRSR
CCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA