| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glnH [H]
Identifier: 213692880
GI number: 213692880
Start: 2208779
End: 2209726
Strand: Reverse
Name: glnH [H]
Synonym: Blon_2021
Alternate gene names: 213692880
Gene position: 2209726-2208779 (Counterclockwise)
Preceding gene: 213692881
Following gene: 213692879
Centisome position: 78.01
GC content: 61.29
Gene sequence:
>948_bases ATGCAGTCCACCAAACTGAAGTCCATTATGGCCATTGCACTGAGCTCGGCCATGCTGTTCGCCACCGCCGCTTGCGGCAC CTCCGACAAGGCCGATGCCGGTACGGATTCCGCCAAGGGCGGCTCCTCCAAGTCGGTCACCATCACCAGCTACGACGTGA GCTCCGTGAAGAAGGACGATGCAATAGCCGCACTGCTGCCTGAATCCGTGACCAAGGACGGCAAGCTCACCATCGGCACC AACCCCTCCTACGCCCCGGCCGAATTCCTCGACGCCGACGGCAAGACCCAGATCGGCTACGACATGGATCTCGCCCGCGC CATGGGCAACATCTTCGGTCTCGAGACCGAAATCGTCTCCTCCAACTTCGATACGATCATTCCGGCCATCGGCTCCAAGT ACGATCTGGGCATCGCCGCCTTCACCATCACCAAGGAGCGCATGGAATCCGTCGACTTCGTCTCCTACTTCACCGCAGGC ATGGGCTATGCAGTGGCCGCAGGCAACCCCAAGAATGTCGACGAGAACGACCTGTGCGGTCTGAACGTTGCCGTCGAGAC CGGCACCGTCGAGGAAGAGGCCATCAACAAGACCGCCAAGCAGTGCAAGGCGGACGGCAAGAAAGACATCACCATCCAGT CCTCCAAGCAGCAGACCGACGCCACCACCGCTGTGGTGACCGGCAAGGCCGACGTGTTCTTCGCCGATTCCCCGGTTGTC GGCTACGCCATCGCCCAGACCGAAGGCCAGCTGGAACAGCTCGGCAAGGACTTCGACTCCGTGCCGAACGCCATCGCCAT CAAGAAGGGCGATTCCCAGACCACCGAAGCCGTGCAGAAGGCCATGCAGAAGCTCATGGACGACGGCACCTACACCAAGA TCCTCCAGCACTGGGGCGTCGAATCCGGCGCACTGGACAAGGCCGAAATCAACCCGGCCGTCGAATAG
Upstream 100 bases:
>100_bases GGCGGGAGTCTTTTTGTATATGTATGCACTGTAGTGTATAAATATGCTTAACCGTTGATCGTTGCCGTTGAAGCGGCGTA AGAGAGAAGAAGAAACGATT
Downstream 100 bases:
>100_bases TCCCCCCCAAGAATGCTCCCGCTTGCGGGAGCTGGCTCGCGGAGCGAGACTGAGGGTGGTCCACACGACGCCCAGCAATC CAGATGGGGCGCACTGTTTG
Product: extracellular solute-binding protein, family 3
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQSTKLKSIMAIALSSAMLFATAACGTSDKADAGTDSAKGGSSKSVTITSYDVSSVKKDDAIAALLPESVTKDGKLTIGT NPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVSSNFDTIIPAIGSKYDLGIAAFTITKERMESVDFVSYFTAG MGYAVAAGNPKNVDENDLCGLNVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVV GYAIAQTEGQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQKLMDDGTYTKILQHWGVESGALDKAEINPAVE
Sequences:
>Translated_315_residues MQSTKLKSIMAIALSSAMLFATAACGTSDKADAGTDSAKGGSSKSVTITSYDVSSVKKDDAIAALLPESVTKDGKLTIGT NPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVSSNFDTIIPAIGSKYDLGIAAFTITKERMESVDFVSYFTAG MGYAVAAGNPKNVDENDLCGLNVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVV GYAIAQTEGQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQKLMDDGTYTKILQHWGVESGALDKAEINPAVE >Mature_315_residues MQSTKLKSIMAIALSSAMLFATAACGTSDKADAGTDSAKGGSSKSVTITSYDVSSVKKDDAIAALLPESVTKDGKLTIGT NPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVSSNFDTIIPAIGSKYDLGIAAFTITKERMESVDFVSYFTAG MGYAVAAGNPKNVDENDLCGLNVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVV GYAIAQTEGQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQKLMDDGTYTKILQHWGVESGALDKAEINPAVE
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=230, Percent_Identity=31.304347826087, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788649, Length=250, Percent_Identity=29.2, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788648, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788228, Length=236, Percent_Identity=24.1525423728814, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787088, Length=245, Percent_Identity=26.1224489795918, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787085, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33055; Mature: 33055
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTKLKSIMAIALSSAMLFATAACGTSDKADAGTDSAKGGSSKSVTITSYDVSSVKKDD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCC AIAALLPESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS HHHHHCCHHHCCCCCEEECCCCCCCCHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHH SNFDTIIPAIGSKYDLGIAAFTITKERMESVDFVSYFTAGMGYAVAAGNPKNVDENDLCG CCCCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC LNVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVV EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCEEEECCCCCE GYAIAQTEGQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQKLMDDGTYTKILQHWGV EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC ESGALDKAEINPAVE CCCCCCHHCCCCCCC >Mature Secondary Structure MQSTKLKSIMAIALSSAMLFATAACGTSDKADAGTDSAKGGSSKSVTITSYDVSSVKKDD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCC AIAALLPESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS HHHHHCCHHHCCCCCEEECCCCCCCCHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHH SNFDTIIPAIGSKYDLGIAAFTITKERMESVDFVSYFTAGMGYAVAAGNPKNVDENDLCG CCCCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC LNVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVV EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCEEEECCCCCE GYAIAQTEGQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQKLMDDGTYTKILQHWGV EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC ESGALDKAEINPAVE CCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]