| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is purK [H]
Identifier: 213692839
GI number: 213692839
Start: 2156934
End: 2158112
Strand: Reverse
Name: purK [H]
Synonym: Blon_1980
Alternate gene names: 213692839
Gene position: 2158112-2156934 (Counterclockwise)
Preceding gene: 213692840
Following gene: 213692838
Centisome position: 76.18
GC content: 63.61
Gene sequence:
>1179_bases ATGCCCAGCTTGTCTGAGGAAACAGGCGGTCGTGTTTCGATGCTGATGCCGGGATCGACCATCGGCATCATCGGCGGCGG CCAGCTCGGCCGCATGATGGCTTTGTCCGCCCGCTACATGGGCTTCCGCGTCGGCGTGCTTGACCCGACGCCGAACTGCC CGACCGGTCAGGTGGCCGACTTCCAGATCACCGCCGAATACGATGACAAAACCGCCATCCATGATCTGGCCGTGCAGTCC GACGTGCTCACCTACGAGTTCGAGAACGTGGACGCCGATGCCATCGACGAGGTGCGCGGCATCACCGCCACCCCGCAGGG CACTGACCTGCTGCGCGTGACCCAGCACCGCGTGCACGAGAAGCAGTTCATCAACGACCACGGCACCGCCACCGCACCGT GGCACGCTGTCAACAACTTCGATGAGCTTGACGCCGCATTGGATGATATTCATTATCCGGCCGTGCTGAAGACCGTGTCC GGCGGCTACGACGGCCACGGTCAGCTCGTGCTGCGTTCCGACGCCGACTTGGAGAAGATCCGCTCCCGTTCCGACCGTGG TGGCGGCTTCCCGCCGAGCATCCTGGAAGGCTTCGTCGACTTCGCATTCGAGGCTTCGATCCTGGTCTCCGGCAACGGCA AGGACTTCGTCACCTTCCCCATCGTGCGTAACGAGCACCGCAACAACATCCTGCACATGACCATCGCCCCCGCCGAAGTG TCCGAACATGTGGCTCGCGAAGCGCATGAACTGGCGATTCGCTTGGCCAAGGGCTTCGAACTGGCTGGCACGCTGGCCAT CGAACTGTTCATCACCAAGGACGATCAGGTCATCGTCAACGAGCTCGCCCCGCGCCCGCACAACTCCGGCCACTACACCA TCGAGGCCTGCTCGATGGACCAGTTCGACGCCCACATCCGCGGCATCGCCGGCTGGCCCATGCCCAAGCCCAAGCTGCTC TCGCCGGCCGTGATGGTCAACGTACTCGGCCAGCATGTGGAGCCGACGCGCGCGCTGATCGCCACCCACCCGGAGTGGAA TGTGCACGACTACGGCAAGGCCGAAGTGCGCCACGACCGCAAGATGGGCCACATCACCGTGCTCACCGACAACCCTGATG CCACGGTTGCTGACCTTGAGGCCACCGGCTGCTGGGACGACCTGAAAAAGAAGGCGTGA
Upstream 100 bases:
>100_bases GGCCTGCTCGCCGTGCAGATGCTCTCCGCCTTCGAGCCCGAACTGGCCGACAAGCTTGAGGATTACCGTAACGAACTGAA AGAAAAGGTGGCTGAATCCA
Downstream 100 bases:
>100_bases CCTTATCGATGGTTGAACATATCGAACGCCAGACCAAGCAGAAGGACGCGATTCGCGCCGCCTTGGCCGACTGTGAGGAG TTCATCTCCGCTCAGGACCT
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPSLSEETGGRVSMLMPGSTIGIIGGGQLGRMMALSARYMGFRVGVLDPTPNCPTGQVADFQITAEYDDKTAIHDLAVQS DVLTYEFENVDADAIDEVRGITATPQGTDLLRVTQHRVHEKQFINDHGTATAPWHAVNNFDELDAALDDIHYPAVLKTVS GGYDGHGQLVLRSDADLEKIRSRSDRGGGFPPSILEGFVDFAFEASILVSGNGKDFVTFPIVRNEHRNNILHMTIAPAEV SEHVAREAHELAIRLAKGFELAGTLAIELFITKDDQVIVNELAPRPHNSGHYTIEACSMDQFDAHIRGIAGWPMPKPKLL SPAVMVNVLGQHVEPTRALIATHPEWNVHDYGKAEVRHDRKMGHITVLTDNPDATVADLEATGCWDDLKKKA
Sequences:
>Translated_392_residues MPSLSEETGGRVSMLMPGSTIGIIGGGQLGRMMALSARYMGFRVGVLDPTPNCPTGQVADFQITAEYDDKTAIHDLAVQS DVLTYEFENVDADAIDEVRGITATPQGTDLLRVTQHRVHEKQFINDHGTATAPWHAVNNFDELDAALDDIHYPAVLKTVS GGYDGHGQLVLRSDADLEKIRSRSDRGGGFPPSILEGFVDFAFEASILVSGNGKDFVTFPIVRNEHRNNILHMTIAPAEV SEHVAREAHELAIRLAKGFELAGTLAIELFITKDDQVIVNELAPRPHNSGHYTIEACSMDQFDAHIRGIAGWPMPKPKLL SPAVMVNVLGQHVEPTRALIATHPEWNVHDYGKAEVRHDRKMGHITVLTDNPDATVADLEATGCWDDLKKKA >Mature_391_residues PSLSEETGGRVSMLMPGSTIGIIGGGQLGRMMALSARYMGFRVGVLDPTPNCPTGQVADFQITAEYDDKTAIHDLAVQSD VLTYEFENVDADAIDEVRGITATPQGTDLLRVTQHRVHEKQFINDHGTATAPWHAVNNFDELDAALDDIHYPAVLKTVSG GYDGHGQLVLRSDADLEKIRSRSDRGGGFPPSILEGFVDFAFEASILVSGNGKDFVTFPIVRNEHRNNILHMTIAPAEVS EHVAREAHELAIRLAKGFELAGTLAIELFITKDDQVIVNELAPRPHNSGHYTIEACSMDQFDAHIRGIAGWPMPKPKLLS PAVMVNVLGQHVEPTRALIATHPEWNVHDYGKAEVRHDRKMGHITVLTDNPDATVADLEATGCWDDLKKKA
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=363, Percent_Identity=29.4765840220386, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1788155, Length=365, Percent_Identity=24.6575342465753, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324702, Length=381, Percent_Identity=32.8083989501312, Blast_Score=187, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 42860; Mature: 42729
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLSEETGGRVSMLMPGSTIGIIGGGQLGRMMALSARYMGFRVGVLDPTPNCPTGQVAD CCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEE FQITAEYDDKTAIHDLAVQSDVLTYEFENVDADAIDEVRGITATPQGTDLLRVTQHRVHE EEEEECCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH KQFINDHGTATAPWHAVNNFDELDAALDDIHYPAVLKTVSGGYDGHGQLVLRSDADLEKI HHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCHHHH RSRSDRGGGFPPSILEGFVDFAFEASILVSGNGKDFVTFPIVRNEHRNNILHMTIAPAEV HCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECHHHH SEHVAREAHELAIRLAKGFELAGTLAIELFITKDDQVIVNELAPRPHNSGHYTIEACSMD HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEEHHHHCCCCCCCCCCEEEEECCCC QFDAHIRGIAGWPMPKPKLLSPAVMVNVLGQHVEPTRALIATHPEWNVHDYGKAEVRHDR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCC KMGHITVLTDNPDATVADLEATGCWDDLKKKA CCCEEEEEECCCCCEEEECCCCCCHHHHHHCC >Mature Secondary Structure PSLSEETGGRVSMLMPGSTIGIIGGGQLGRMMALSARYMGFRVGVLDPTPNCPTGQVAD CCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEE FQITAEYDDKTAIHDLAVQSDVLTYEFENVDADAIDEVRGITATPQGTDLLRVTQHRVHE EEEEECCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH KQFINDHGTATAPWHAVNNFDELDAALDDIHYPAVLKTVSGGYDGHGQLVLRSDADLEKI HHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCHHHH RSRSDRGGGFPPSILEGFVDFAFEASILVSGNGKDFVTFPIVRNEHRNNILHMTIAPAEV HCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECHHHH SEHVAREAHELAIRLAKGFELAGTLAIELFITKDDQVIVNELAPRPHNSGHYTIEACSMD HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEEHHHHCCCCCCCCCCEEEEECCCC QFDAHIRGIAGWPMPKPKLLSPAVMVNVLGQHVEPTRALIATHPEWNVHDYGKAEVRHDR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCC KMGHITVLTDNPDATVADLEATGCWDDLKKKA CCCEEEEEECCCCCEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]