| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is zur [H]
Identifier: 213692838
GI number: 213692838
Start: 2156497
End: 2156925
Strand: Reverse
Name: zur [H]
Synonym: Blon_1979
Alternate gene names: 213692838
Gene position: 2156925-2156497 (Counterclockwise)
Preceding gene: 213692839
Following gene: 213692836
Centisome position: 76.14
GC content: 61.31
Gene sequence:
>429_bases ATGGTTGAACATATCGAACGCCAGACCAAGCAGAAGGACGCGATTCGCGCCGCCTTGGCCGACTGTGAGGAGTTCATCTC CGCTCAGGACCTGCACCGCAGGCTGGAGGACGAAGGCTCGAAAATCGGCTTGGCCACCGTGTACCGCCAGCTCAACGCCT TGGCTGATGCCGGTGCCGCCGACACGATCCGCCTGGACGGCCAGCAGCTGTTCCGCCTATGCGGCGACGACGGACATCAC CACCACTTGGTGTGCAAGCGGTGCGGCAAAACCGTGGAAATCGACCCGCCCAGCGAGGCTTGGCTGCGCAAAGTGGCCGA CGGCCACGGCTTCACCGTCGAATCCCACACCCTGGAGGTCTTCGGACTATGCCCTGATTGCCAAAAGGAGCAGAAAGCGC AGAAGTCTCAGAAAGCAGTGAGCGAATAA
Upstream 100 bases:
>100_bases GCCACATCACCGTGCTCACCGACAACCCTGATGCCACGGTTGCTGACCTTGAGGCCACCGGCTGCTGGGACGACCTGAAA AAGAAGGCGTGACCTTATCG
Downstream 100 bases:
>100_bases CAAATGGGATCGGCTTCAAAGCCGATCCCATTTGTTATTCCGCTGCTATTCCACCGACTTCAGGGCGCCGAGCATGTCGA CCGTCTTCAACCGCCGGTAG
Product: ferric uptake regulator, Fur family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MVEHIERQTKQKDAIRAALADCEEFISAQDLHRRLEDEGSKIGLATVYRQLNALADAGAADTIRLDGQQLFRLCGDDGHH HHLVCKRCGKTVEIDPPSEAWLRKVADGHGFTVESHTLEVFGLCPDCQKEQKAQKSQKAVSE
Sequences:
>Translated_142_residues MVEHIERQTKQKDAIRAALADCEEFISAQDLHRRLEDEGSKIGLATVYRQLNALADAGAADTIRLDGQQLFRLCGDDGHH HHLVCKRCGKTVEIDPPSEAWLRKVADGHGFTVESHTLEVFGLCPDCQKEQKAQKSQKAVSE >Mature_142_residues MVEHIERQTKQKDAIRAALADCEEFISAQDLHRRLEDEGSKIGLATVYRQLNALADAGAADTIRLDGQQLFRLCGDDGHH HHLVCKRCGKTVEIDPPSEAWLRKVADGHGFTVESHTLEVFGLCPDCQKEQKAQKSQKAVSE
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=116, Percent_Identity=40.5172413793103, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15817; Mature: 15817
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEHIERQTKQKDAIRAALADCEEFISAQDLHRRLEDEGSKIGLATVYRQLNALADAGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DTIRLDGQQLFRLCGDDGHHHHLVCKRCGKTVEIDPPSEAWLRKVADGHGFTVESHTLEV CEEEECHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCEECCCCEEE FGLCPDCQKEQKAQKSQKAVSE EECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEHIERQTKQKDAIRAALADCEEFISAQDLHRRLEDEGSKIGLATVYRQLNALADAGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DTIRLDGQQLFRLCGDDGHHHHLVCKRCGKTVEIDPPSEAWLRKVADGHGFTVESHTLEV CEEEECHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCEECCCCEEE FGLCPDCQKEQKAQKSQKAVSE EECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]