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The map label for this gene is ycgR [H]

Identifier: 213692832

GI number: 213692832

Start: 2151722

End: 2152849

Strand: Direct

Name: ycgR [H]

Synonym: Blon_1972

Alternate gene names: 213692832

Gene position: 2151722-2152849 (Clockwise)

Preceding gene: 213692831

Following gene: 213692833

Centisome position: 75.96

GC content: 63.21

Gene sequence:

>1128_bases
ATGAAAGAACCTCGCACGCAGCGCACGGAACAGGTGAACACCGCGCAACAGGACCATTCGGCGAACTATCTGTTTCTGAT
TATCGGCACGCCGCTGGTGGCGTTCCTGATTGCGGCTTCCGCGATGCTCGAGTCGCGTGGGTTTCCGGTTCCGCTGGTGC
GTATCGGCACCGGTGCCGCGGGGCTTATCCTGCAGGCGATTCCGTTCATGCTGCTGGGCGCGATGATGTCGGCCGCGGTC
AGCACGTTCGTCAGCGCCGATTTTCTGGCCCGCCACATACCGAAATCGTTGGCCGGCGGACTGGCCGCGGCATTGGTGGC
CGGTCTGTGCCTACCGGTGTGCGATTGCATGGTGGTGCCTACGTTCGCGAATCTGATGCGCAAACGCCTGCCGCTGCCGT
GTGCGGTGACGTTTCTGTGCGCAGTGCCGGTGATGAATCCGATGGCGATATGGTCCACATGGTTCGCATTCACCGACAAA
CCATGGATGGTGGCGGCCCGCATGGGGTTGGGCATGGTAGTGGCGATAGTCGCGGGGGTGTCGTTCGCGGTGTGGCCGCT
CCGCTCCCCTGCGGTGCGTGAGAGGCCGCTGACGATTGGGCGGTCGTTGATTTGCGAGGATTGTGCAGGGGCGACGGGTG
ATTCGCCTGAGAGCCACCCCCAGTCGGCTTTGCCGACAGCCCCCGCCGGCGGGGGCACGGGGCGCGGATTGGAGCGGTTC
ACGCATTTCATTCGGCATACGCATGACGACTTTATGCGGATGATGCCGATTCTGCTGTTCGGCACGATCATTGCCTCCAT
CATGCGCACCGCATTGTCGTCGTTGACCAACGGTTCAAGCACGCTCGATGACGCTGGTGCCATCGTACTGATTCTGGCGG
CGATGGGACTGGCGTTCCTGTGTTCGCTGTGCTCTACGTCCGATGCGGTGATCGCCGCCAGCATGATTGGCGCGCTGCCG
GTCTCCGCCATGCTTGCCTTCCTGGTCTTCGGCCCGATGCTCGACCTCAAGAACACGCTGATGCTGGCCACGGAATGCCG
GCCACGGTTCATCATCCGGTTCATCGCGACCGTGGCGGCGGCCTGCCTCCTCGCCGCGATTGCCGCCCATCTGGTGATGG
GAGCGTAG

Upstream 100 bases:

>100_bases
TATCGATGTGTACCATCGGCATGCGGGGACTCGCATATTATCTCGACCACTATCATGCGTACGGTGCTAATATGACGGCG
ATATGGCAGGTGATATTCGC

Downstream 100 bases:

>100_bases
CCATGAAGCGCAAAGCCACACTCCCCGACCGCGTGGAGGCGCTGTGTTTCGCGGCGCTGGGCGCGGCCATCGCCTATGCA
GCGGTGGGCGGATCATACAC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKEPRTQRTEQVNTAQQDHSANYLFLIIGTPLVAFLIAASAMLESRGFPVPLVRIGTGAAGLILQAIPFMLLGAMMSAAV
STFVSADFLARHIPKSLAGGLAAALVAGLCLPVCDCMVVPTFANLMRKRLPLPCAVTFLCAVPVMNPMAIWSTWFAFTDK
PWMVAARMGLGMVVAIVAGVSFAVWPLRSPAVRERPLTIGRSLICEDCAGATGDSPESHPQSALPTAPAGGGTGRGLERF
THFIRHTHDDFMRMMPILLFGTIIASIMRTALSSLTNGSSTLDDAGAIVLILAAMGLAFLCSLCSTSDAVIAASMIGALP
VSAMLAFLVFGPMLDLKNTLMLATECRPRFIIRFIATVAAACLLAAIAAHLVMGA

Sequences:

>Translated_375_residues
MKEPRTQRTEQVNTAQQDHSANYLFLIIGTPLVAFLIAASAMLESRGFPVPLVRIGTGAAGLILQAIPFMLLGAMMSAAV
STFVSADFLARHIPKSLAGGLAAALVAGLCLPVCDCMVVPTFANLMRKRLPLPCAVTFLCAVPVMNPMAIWSTWFAFTDK
PWMVAARMGLGMVVAIVAGVSFAVWPLRSPAVRERPLTIGRSLICEDCAGATGDSPESHPQSALPTAPAGGGTGRGLERF
THFIRHTHDDFMRMMPILLFGTIIASIMRTALSSLTNGSSTLDDAGAIVLILAAMGLAFLCSLCSTSDAVIAASMIGALP
VSAMLAFLVFGPMLDLKNTLMLATECRPRFIIRFIATVAAACLLAAIAAHLVMGA
>Mature_375_residues
MKEPRTQRTEQVNTAQQDHSANYLFLIIGTPLVAFLIAASAMLESRGFPVPLVRIGTGAAGLILQAIPFMLLGAMMSAAV
STFVSADFLARHIPKSLAGGLAAALVAGLCLPVCDCMVVPTFANLMRKRLPLPCAVTFLCAVPVMNPMAIWSTWFAFTDK
PWMVAARMGLGMVVAIVAGVSFAVWPLRSPAVRERPLTIGRSLICEDCAGATGDSPESHPQSALPTAPAGGGTGRGLERF
THFIRHTHDDFMRMMPILLFGTIIASIMRTALSSLTNGSSTLDDAGAIVLILAAMGLAFLCSLCSTSDAVIAASMIGALP
VSAMLAFLVFGPMLDLKNTLMLATECRPRFIIRFIATVAAACLLAAIAAHLVMGA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 39492; Mature: 39492

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPRTQRTEQVNTAQQDHSANYLFLIIGTPLVAFLIAASAMLESRGFPVPLVRIGTGAA
CCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
GLILQAIPFMLLGAMMSAAVSTFVSADFLARHIPKSLAGGLAAALVAGLCLPVCDCMVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFANLMRKRLPLPCAVTFLCAVPVMNPMAIWSTWFAFTDKPWMVAARMGLGMVVAIVAGV
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SFAVWPLRSPAVRERPLTIGRSLICEDCAGATGDSPESHPQSALPTAPAGGGTGRGLERF
HHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
THFIRHTHDDFMRMMPILLFGTIIASIMRTALSSLTNGSSTLDDAGAIVLILAAMGLAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
CSLCSTSDAVIAASMIGALPVSAMLAFLVFGPMLDLKNTLMLATECRPRFIIRFIATVAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ACLLAAIAAHLVMGA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEPRTQRTEQVNTAQQDHSANYLFLIIGTPLVAFLIAASAMLESRGFPVPLVRIGTGAA
CCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
GLILQAIPFMLLGAMMSAAVSTFVSADFLARHIPKSLAGGLAAALVAGLCLPVCDCMVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFANLMRKRLPLPCAVTFLCAVPVMNPMAIWSTWFAFTDKPWMVAARMGLGMVVAIVAGV
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SFAVWPLRSPAVRERPLTIGRSLICEDCAGATGDSPESHPQSALPTAPAGGGTGRGLERF
HHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
THFIRHTHDDFMRMMPILLFGTIIASIMRTALSSLTNGSSTLDDAGAIVLILAAMGLAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
CSLCSTSDAVIAASMIGALPVSAMLAFLVFGPMLDLKNTLMLATECRPRFIIRFIATVAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ACLLAAIAAHLVMGA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]