| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692833
Identifier: 213692833
GI number: 213692833
Start: 2152852
End: 2153607
Strand: Direct
Name: 213692833
Synonym: Blon_1973
Alternate gene names: NA
Gene position: 2152852-2153607 (Clockwise)
Preceding gene: 213692832
Following gene: 213692834
Centisome position: 76.0
GC content: 63.49
Gene sequence:
>756_bases ATGAAGCGCAAAGCCACACTCCCCGACCGCGTGGAGGCGCTGTGTTTCGCGGCGCTGGGCGCGGCCATCGCCTATGCAGC GGTGGGCGGATCATACACCACGCTGACCACGCCGCGTTCGCTGCCGTATCTCATCATCGGTGCGGTACTGCTGTTCGCGC TGGCGACCGCAGCATGGCTCGGACTGTTCCACGCCACGGAGCGTTCGGTTTTACGGTTCCTGATCGCCTTGATTATTCCG GCGCTGCTGATCGCCGTGCCGTTCCAGCCCAGCAGCGGCAGCGGCGGCTTCGACGAGTACGCCGGCGGCCGCGCTATCGC CATTCCCCGCAGCTCGCACAAGCCTGATGGCTCCTCGCAGCTGCACGGACTCGACACGGCGAACAAGACCCTGACCATCA GCAACGACGAATTCGGCTCATGGTTCGAGCAGATCGACCATAATCCGCAGCGTTACGTCGGTTACCATGTGCAAGTCACC GGGTTTGTGAGCAAGTCGCGTACGTTCGACGCGGACGAGTTCGAGCTGTCCCGCCAGTTCATGTCCTGCTGCATTCTCGA CATGACCCCATTCGGGTTCATAGCCAGCTCCGGCAAGGCCGGCACCTCGCACAATCACGACTGGGTCACCGTCGACGCCG TCATCAAGCAGGGCGTCTACGGCTCCGCCGGCCACGAGCGCCAAGGCCTTATACTGCAGGTCCGGTCGGTCAGCAAAGCC GCAGCCGCCCCGACCGGCTACTTCTACTGGCAGTAA
Upstream 100 bases:
>100_bases CGGAATGCCGGCCACGGTTCATCATCCGGTTCATCGCGACCGTGGCGGCGGCCTGCCTCCTCGCCGCGATTGCCGCCCAT CTGGTGATGGGAGCGTAGCC
Downstream 100 bases:
>100_bases ATGACGCGTCTCCCGAAATGGAAAGCACTGCGCTGCGCCATGACTCGCCCCATATCGGCAGAAATCCCGCGTTACAACGA AAGGTACGCGGGGGCTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKRKATLPDRVEALCFAALGAAIAYAAVGGSYTTLTTPRSLPYLIIGAVLLFALATAAWLGLFHATERSVLRFLIALIIP ALLIAVPFQPSSGSGGFDEYAGGRAIAIPRSSHKPDGSSQLHGLDTANKTLTISNDEFGSWFEQIDHNPQRYVGYHVQVT GFVSKSRTFDADEFELSRQFMSCCILDMTPFGFIASSGKAGTSHNHDWVTVDAVIKQGVYGSAGHERQGLILQVRSVSKA AAAPTGYFYWQ
Sequences:
>Translated_251_residues MKRKATLPDRVEALCFAALGAAIAYAAVGGSYTTLTTPRSLPYLIIGAVLLFALATAAWLGLFHATERSVLRFLIALIIP ALLIAVPFQPSSGSGGFDEYAGGRAIAIPRSSHKPDGSSQLHGLDTANKTLTISNDEFGSWFEQIDHNPQRYVGYHVQVT GFVSKSRTFDADEFELSRQFMSCCILDMTPFGFIASSGKAGTSHNHDWVTVDAVIKQGVYGSAGHERQGLILQVRSVSKA AAAPTGYFYWQ >Mature_251_residues MKRKATLPDRVEALCFAALGAAIAYAAVGGSYTTLTTPRSLPYLIIGAVLLFALATAAWLGLFHATERSVLRFLIALIIP ALLIAVPFQPSSGSGGFDEYAGGRAIAIPRSSHKPDGSSQLHGLDTANKTLTISNDEFGSWFEQIDHNPQRYVGYHVQVT GFVSKSRTFDADEFELSRQFMSCCILDMTPFGFIASSGKAGTSHNHDWVTVDAVIKQGVYGSAGHERQGLILQVRSVSKA AAAPTGYFYWQ
Specific function: Unknown
COG id: COG3689
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27080; Mature: 27080
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKATLPDRVEALCFAALGAAIAYAAVGGSYTTLTTPRSLPYLIIGAVLLFALATAAWL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH GLFHATERSVLRFLIALIIPALLIAVPFQPSSGSGGFDEYAGGRAIAIPRSSHKPDGSSQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCC LHGLDTANKTLTISNDEFGSWFEQIDHNPQRYVGYHVQVTGFVSKSRTFDADEFELSRQF CCCCCCCCCEEEECCCHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCCCCHHHHHHHHH MSCCILDMTPFGFIASSGKAGTSHNHDWVTVDAVIKQGVYGSAGHERQGLILQVRSVSKA HHHHHHCCCCCCEEECCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEEEEHHHHH AAAPTGYFYWQ HCCCCCEEEEC >Mature Secondary Structure MKRKATLPDRVEALCFAALGAAIAYAAVGGSYTTLTTPRSLPYLIIGAVLLFALATAAWL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH GLFHATERSVLRFLIALIIPALLIAVPFQPSSGSGGFDEYAGGRAIAIPRSSHKPDGSSQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCC LHGLDTANKTLTISNDEFGSWFEQIDHNPQRYVGYHVQVTGFVSKSRTFDADEFELSRQF CCCCCCCCCEEEECCCHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCCCCHHHHHHHHH MSCCILDMTPFGFIASSGKAGTSHNHDWVTVDAVIKQGVYGSAGHERQGLILQVRSVSKA HHHHHHCCCCCCEEECCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEEEEHHHHH AAAPTGYFYWQ HCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA