| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yfeA [H]
Identifier: 213692823
GI number: 213692823
Start: 2147117
End: 2148040
Strand: Reverse
Name: yfeA [H]
Synonym: Blon_1963
Alternate gene names: 213692823
Gene position: 2148040-2147117 (Counterclockwise)
Preceding gene: 213692824
Following gene: 213692822
Centisome position: 75.83
GC content: 64.39
Gene sequence:
>924_bases ATGTCCATCATGTCCAACGCCAAGCGCGCGCTCGCCATCGCGGCCGCCTCGGCGACCCTGTTCTCGATGGCCGCCTGCGG TTCCAGCAATGCCGCCGGCAGCAAGTCCGATTCCAGCAGCGCCGCGTCTTCCGGCAAGATCGAGGTCGTCGCCTCCATCA ACCAGTGGGGTTCCGTGGCCGAAGACCTCGGCGGCAGCAACGTCGAAGTCACCAACATCATGGCCAAGACCAACGTCGAG GCGCACGATTACGAGCCCACCAGCCAGGATGTCGCCAAGTTCGGCACTGCCAAGGTAGCCGTAGTCAATGGCGCCGACTA CGACCCGTGGGCCACCAAGGCCGCCAAGTCGACCAAGGCCACGCTGGTCACCGCCGCCGAGACCACCGGCATCAAGGAAG GCGACAACCCGCACGTCTGGTTCTCCGCCAAGGTGCGCTCCAGCACCGCCGACGCCATCACCGCCGCCTATCAGAAGGCC GACCCGAGCCACAAGGACGACTACGCCAAGCTCAACAAGGATTGGCACGCCAAGGAAGACCAGCTTGAGTCCAAGATCAA GGAGACTTCCGCCAAGACCGAGGGCCTGCCGTACGCCGCCACCGAATCCGTGGCCTGGTACCTGGCCGACGACCTCAAGA TGACCGACGTCACCCCGAAGGGCTACGCCCAGGCCTCCGCCAACGAGAGCGAGCCGACCCCGGCCGACATCAAGGACTTC CAGGACACCCTGAAGGCTGGCTCCATCAAGATGCTCGTCTTCAACAGTCAGGAAGCCACCTCCACCACTGACCAGATCAC CGGTGCCGCCAAGGACGCCAGCGTGCCGATCGTGGAGCTCACCGAGCAGATGCCGAAGCAGTACACCAACCTGCTCGACT GGATGAGCGCGCTGGTCGACCAGTTCGCCGCCGCCGTGAAGTAA
Upstream 100 bases:
>100_bases TCTCAATACATGTTATTCTGTCGTGTTGGGGGCCGGGCGATGATGCAGCAACAGCAGCATCGCCCGGCCAAACAGCTGAA TTAGAGAGGAAAATCCAATC
Downstream 100 bases:
>100_bases TGCGGCAGTAGCTGGCAATCCGCAACAGCGATAAGGGAAATAGCCAAGTCAGATAGCGAGGCGTTGTCTAGGGGAGAACA GAACACTTCGCTATCAGGGA
Product: periplasmic solute binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSIMSNAKRALAIAAASATLFSMAACGSSNAAGSKSDSSSAASSGKIEVVASINQWGSVAEDLGGSNVEVTNIMAKTNVE AHDYEPTSQDVAKFGTAKVAVVNGADYDPWATKAAKSTKATLVTAAETTGIKEGDNPHVWFSAKVRSSTADAITAAYQKA DPSHKDDYAKLNKDWHAKEDQLESKIKETSAKTEGLPYAATESVAWYLADDLKMTDVTPKGYAQASANESEPTPADIKDF QDTLKAGSIKMLVFNSQEATSTTDQITGAAKDASVPIVELTEQMPKQYTNLLDWMSALVDQFAAAVK
Sequences:
>Translated_307_residues MSIMSNAKRALAIAAASATLFSMAACGSSNAAGSKSDSSSAASSGKIEVVASINQWGSVAEDLGGSNVEVTNIMAKTNVE AHDYEPTSQDVAKFGTAKVAVVNGADYDPWATKAAKSTKATLVTAAETTGIKEGDNPHVWFSAKVRSSTADAITAAYQKA DPSHKDDYAKLNKDWHAKEDQLESKIKETSAKTEGLPYAATESVAWYLADDLKMTDVTPKGYAQASANESEPTPADIKDF QDTLKAGSIKMLVFNSQEATSTTDQITGAAKDASVPIVELTEQMPKQYTNLLDWMSALVDQFAAAVK >Mature_306_residues SIMSNAKRALAIAAASATLFSMAACGSSNAAGSKSDSSSAASSGKIEVVASINQWGSVAEDLGGSNVEVTNIMAKTNVEA HDYEPTSQDVAKFGTAKVAVVNGADYDPWATKAAKSTKATLVTAAETTGIKEGDNPHVWFSAKVRSSTADAITAAYQKAD PSHKDDYAKLNKDWHAKEDQLESKIKETSAKTEGLPYAATESVAWYLADDLKMTDVTPKGYAQASANESEPTPADIKDFQ DTLKAGSIKMLVFNSQEATSTTDQITGAAKDASVPIVELTEQMPKQYTNLLDWMSALVDQFAAAVK
Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 32409; Mature: 32278
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMSNAKRALAIAAASATLFSMAACGSSNAAGSKSDSSSAASSGKIEVVASINQWGSVA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH EDLGGSNVEVTNIMAKTNVEAHDYEPTSQDVAKFGTAKVAVVNGADYDPWATKAAKSTKA HHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCE TLVTAAETTGIKEGDNPHVWFSAKVRSSTADAITAAYQKADPSHKDDYAKLNKDWHAKED EEEEEHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHH QLESKIKETSAKTEGLPYAATESVAWYLADDLKMTDVTPKGYAQASANESEPTPADIKDF HHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHH QDTLKAGSIKMLVFNSQEATSTTDQITGAAKDASVPIVELTEQMPKQYTNLLDWMSALVD HHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QFAAAVK HHHHHCC >Mature Secondary Structure SIMSNAKRALAIAAASATLFSMAACGSSNAAGSKSDSSSAASSGKIEVVASINQWGSVA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH EDLGGSNVEVTNIMAKTNVEAHDYEPTSQDVAKFGTAKVAVVNGADYDPWATKAAKSTKA HHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCE TLVTAAETTGIKEGDNPHVWFSAKVRSSTADAITAAYQKADPSHKDDYAKLNKDWHAKED EEEEEHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHH QLESKIKETSAKTEGLPYAATESVAWYLADDLKMTDVTPKGYAQASANESEPTPADIKDF HHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHH QDTLKAGSIKMLVFNSQEATSTTDQITGAAKDASVPIVELTEQMPKQYTNLLDWMSALVD HHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QFAAAVK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9495751; 11586360; 12142430 [H]