| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is cgmA [H]
Identifier: 213692822
GI number: 213692822
Start: 2144780
End: 2146858
Strand: Reverse
Name: cgmA [H]
Synonym: Blon_1962
Alternate gene names: 213692822
Gene position: 2146858-2144780 (Counterclockwise)
Preceding gene: 213692823
Following gene: 213692821
Centisome position: 75.79
GC content: 57.48
Gene sequence:
>2079_bases ATGAGCGAGAACACTAGTAGTACCACCACCACAGTGAAACCCCATTTCAAGCTTTGGGCCAAAAAGGCCGAAGCCAATGA AGTCACGCCCCAGCACCCCCACAAGCCCTTCCCCGGCTGGGTGTACGGCGTGCTCTTCGTTATCTTCGACATCATCGTCG TGACGGCGCTCGAAGTCGGTGTTTCGGCAAGCTCCACCCGCGTGCAGCTGTCCAGTCCGACCGTCGGATTCGGCTTCGTG AGCAAGATGTGGACCGACGGCAACTTCGTGTTCGCGCTCAACATGATACTTGTCGCGCTGCTGTACCTTATGCTCCTGAT GCTGCTCAACCGGTTCTGGGCGTCGAGCATCGTGATGCTCGCGGCCGGGATCATCGTCGCCGTCATCGAGCATTTCAAAA TCGAGATCCGCTACGAGGCCATCCTGCCCGCCGATCTCGGGTTCCTCGGCTCCAATACCGGCAACATGCTCACCTTCGCC CCGGCCGGCGCGCACGTGACCATCCTCATCGCGCTCGCCGTGTTCGCCGTGCTGCTCGTCCCGGTATTGGCGCTGCGGTA CGCCGACGGACGCAAAGGCCGCATGATTCAAACGGATGATCGCCGCCTGAACCTCACGTCCCGTCTGATCCTGTTGCTGC TGCCGATTCTGGTGTTCGCGTTGTACTGCATGCATGTGAGCACCACCGATTCGCTGGCCAACAAGTTCTCCCGCGCCTTG GGAGACACGCCATCCATGTGGGATTCCGTGTATGACGCGCAGCGCAACGGTCCGCTCGTAGCCTTTACCCGCCAGCTCAA CCCGAAGATCATGGACAAGCCGAGCAACTACTCCGAGGAGACCATGAAGAAGGTCGCCGCTCGCTACCAGAAGAAAGCGG AGATGATCAACGCCTCCCGCACCAATAATCTTACTGATTCGACAGTGGTGTACGTGCTGTCCGAATCCTTCTCCGACCCG AGCCGCGTGCCGGGACTGAAGACCAGCAAGGATTCGATGCCCAACATCCGCAAGATCAAGGCGGGCACCACCTCCGGCCT GATGCTCTCCTCCGGCTACGGCGGCGGTACGGCCAACCTCGAATACATGGGACTTTCCGGCCTGAGCATGGCCAATTTCG ATTCCTCCCTGTCCAGCCCGTACCAGCAGCTGGTCCCGAGCCAGCATTGGACCCCCACCATCAACCAGATGTGGGGCGCG CCCGCCAACTCGCTCGGCTATCATCCGTACGAATCCAGCATGTACTCGCGTGCCACGAACTACAAGAAGTTCGGCTTCTC GCACTTCTACACGTTGACCGGTCCGGACGTGATCAAGTATCAGGACAAGATCGACGAGTCGCCGTACGTTTCTGATAAGT CTTCCTATGATTCTGCGCTGGAAGGCATCAAGTCCGGCAAGACGAACAAATTTATCCAGATCATCACCATGCAGAATCAC ATGCCATACCACGAGTGGTATGAGAATAACGACTACACCGCCGAATCCACCACGGGTACGCCGCTGGGTGATGATGAACA GCAGTCGATTGAGACCTATCAAAAGGGTGTGGAGATTACCGATCAGGCCACTCAGGAGTTCCTGAATGAACTGGATGCGC TGGATAAGCCCGTCACCGTGGTGTTCTATGGCGACCACTTGCCGGGCATCTACTCGTCCGCCAGTGAGGATGACAATAAC TCCCTGGCCCTGCACCTGACCGATTACTTCATCTGGTCGAACAAGGCCTCTGGTTCCCAAGGCAATAAAGCAAGTGATGC AGCCTACTCCTCGCCGAACTTCTTCGTGGCGCAGGCCGCCGATCACATGAACGCCAAGGTCAGCCCGTATCTGGCGTTCC TAACCGAGATGCATTCCAAGATCGCCGCCATGGAACCGCCCGTGGTCAACAAGATCCAAGGCTGGGACCGTATCCCCGAA GGCCAGAGCATCTACCTTGATCAGAACGGCAACCCGATGTCCACCGATGACTTCGACAAGGAAACCAAGCAGCTGCTTGC CGACTACAAGCTCATCCAATACGACATCACCGCCGGCAAAAACTACCTCAAAGACACTGATTTCATGACGTTGCCGTAA
Upstream 100 bases:
>100_bases TGAATAGTTAGGAAACGGTAAGAAAATAGTGGAACTATGGATTTTCCAAAGTTCAGTGGCAACAATATGCCCTTGAAAAG GCACATACGGAAACAGGCGA
Downstream 100 bases:
>100_bases ACCCGGGCGGCGCGCGCCGGCGCGACGGCGGGACGCGGGCGCGATGACGTACGATGGGTAGGTCGGCACCCGGGAAGACC ATTCCGGGGGTGTGTGGGAA
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSENTSSTTTTVKPHFKLWAKKAEANEVTPQHPHKPFPGWVYGVLFVIFDIIVVTALEVGVSASSTRVQLSSPTVGFGFV SKMWTDGNFVFALNMILVALLYLMLLMLLNRFWASSIVMLAAGIIVAVIEHFKIEIRYEAILPADLGFLGSNTGNMLTFA PAGAHVTILIALAVFAVLLVPVLALRYADGRKGRMIQTDDRRLNLTSRLILLLLPILVFALYCMHVSTTDSLANKFSRAL GDTPSMWDSVYDAQRNGPLVAFTRQLNPKIMDKPSNYSEETMKKVAARYQKKAEMINASRTNNLTDSTVVYVLSESFSDP SRVPGLKTSKDSMPNIRKIKAGTTSGLMLSSGYGGGTANLEYMGLSGLSMANFDSSLSSPYQQLVPSQHWTPTINQMWGA PANSLGYHPYESSMYSRATNYKKFGFSHFYTLTGPDVIKYQDKIDESPYVSDKSSYDSALEGIKSGKTNKFIQIITMQNH MPYHEWYENNDYTAESTTGTPLGDDEQQSIETYQKGVEITDQATQEFLNELDALDKPVTVVFYGDHLPGIYSSASEDDNN SLALHLTDYFIWSNKASGSQGNKASDAAYSSPNFFVAQAADHMNAKVSPYLAFLTEMHSKIAAMEPPVVNKIQGWDRIPE GQSIYLDQNGNPMSTDDFDKETKQLLADYKLIQYDITAGKNYLKDTDFMTLP
Sequences:
>Translated_692_residues MSENTSSTTTTVKPHFKLWAKKAEANEVTPQHPHKPFPGWVYGVLFVIFDIIVVTALEVGVSASSTRVQLSSPTVGFGFV SKMWTDGNFVFALNMILVALLYLMLLMLLNRFWASSIVMLAAGIIVAVIEHFKIEIRYEAILPADLGFLGSNTGNMLTFA PAGAHVTILIALAVFAVLLVPVLALRYADGRKGRMIQTDDRRLNLTSRLILLLLPILVFALYCMHVSTTDSLANKFSRAL GDTPSMWDSVYDAQRNGPLVAFTRQLNPKIMDKPSNYSEETMKKVAARYQKKAEMINASRTNNLTDSTVVYVLSESFSDP SRVPGLKTSKDSMPNIRKIKAGTTSGLMLSSGYGGGTANLEYMGLSGLSMANFDSSLSSPYQQLVPSQHWTPTINQMWGA PANSLGYHPYESSMYSRATNYKKFGFSHFYTLTGPDVIKYQDKIDESPYVSDKSSYDSALEGIKSGKTNKFIQIITMQNH MPYHEWYENNDYTAESTTGTPLGDDEQQSIETYQKGVEITDQATQEFLNELDALDKPVTVVFYGDHLPGIYSSASEDDNN SLALHLTDYFIWSNKASGSQGNKASDAAYSSPNFFVAQAADHMNAKVSPYLAFLTEMHSKIAAMEPPVVNKIQGWDRIPE GQSIYLDQNGNPMSTDDFDKETKQLLADYKLIQYDITAGKNYLKDTDFMTLP >Mature_691_residues SENTSSTTTTVKPHFKLWAKKAEANEVTPQHPHKPFPGWVYGVLFVIFDIIVVTALEVGVSASSTRVQLSSPTVGFGFVS KMWTDGNFVFALNMILVALLYLMLLMLLNRFWASSIVMLAAGIIVAVIEHFKIEIRYEAILPADLGFLGSNTGNMLTFAP AGAHVTILIALAVFAVLLVPVLALRYADGRKGRMIQTDDRRLNLTSRLILLLLPILVFALYCMHVSTTDSLANKFSRALG DTPSMWDSVYDAQRNGPLVAFTRQLNPKIMDKPSNYSEETMKKVAARYQKKAEMINASRTNNLTDSTVVYVLSESFSDPS RVPGLKTSKDSMPNIRKIKAGTTSGLMLSSGYGGGTANLEYMGLSGLSMANFDSSLSSPYQQLVPSQHWTPTINQMWGAP ANSLGYHPYESSMYSRATNYKKFGFSHFYTLTGPDVIKYQDKIDESPYVSDKSSYDSALEGIKSGKTNKFIQIITMQNHM PYHEWYENNDYTAESTTGTPLGDDEQQSIETYQKGVEITDQATQEFLNELDALDKPVTVVFYGDHLPGIYSSASEDDNNS LALHLTDYFIWSNKASGSQGNKASDAAYSSPNFFVAQAADHMNAKVSPYLAFLTEMHSKIAAMEPPVVNKIQGWDRIPEG QSIYLDQNGNPMSTDDFDKETKQLLADYKLIQYDITAGKNYLKDTDFMTLP
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 76788; Mature: 76657
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENTSSTTTTVKPHFKLWAKKAEANEVTPQHPHKPFPGWVYGVLFVIFDIIVVTALEVG CCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC VSASSTRVQLSSPTVGFGFVSKMWTDGNFVFALNMILVALLYLMLLMLLNRFWASSIVML CCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGIIVAVIEHFKIEIRYEAILPADLGFLGSNTGNMLTFAPAGAHVTILIALAVFAVLLV HHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH PVLALRYADGRKGRMIQTDDRRLNLTSRLILLLLPILVFALYCMHVSTTDSLANKFSRAL HHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDTPSMWDSVYDAQRNGPLVAFTRQLNPKIMDKPSNYSEETMKKVAARYQKKAEMINASR CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC TNNLTDSTVVYVLSESFSDPSRVPGLKTSKDSMPNIRKIKAGTTSGLMLSSGYGGGTANL CCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCE EYMGLSGLSMANFDSSLSSPYQQLVPSQHWTPTINQMWGAPANSLGYHPYESSMYSRATN EEECCCCCCHHCCCHHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC YKKFGFSHFYTLTGPDVIKYQDKIDESPYVSDKSSYDSALEGIKSGKTNKFIQIITMQNH CHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC MPYHEWYENNDYTAESTTGTPLGDDEQQSIETYQKGVEITDQATQEFLNELDALDKPVTV CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VFYGDHLPGIYSSASEDDNNSLALHLTDYFIWSNKASGSQGNKASDAAYSSPNFFVAQAA EEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECH DHMNAKVSPYLAFLTEMHSKIAAMEPPVVNKIQGWDRIPEGQSIYLDQNGNPMSTDDFDK HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHH ETKQLLADYKLIQYDITAGKNYLKDTDFMTLP HHHHHHHHHHHEEEEECCCCCHHCCCCCEECC >Mature Secondary Structure SENTSSTTTTVKPHFKLWAKKAEANEVTPQHPHKPFPGWVYGVLFVIFDIIVVTALEVG CCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC VSASSTRVQLSSPTVGFGFVSKMWTDGNFVFALNMILVALLYLMLLMLLNRFWASSIVML CCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGIIVAVIEHFKIEIRYEAILPADLGFLGSNTGNMLTFAPAGAHVTILIALAVFAVLLV HHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH PVLALRYADGRKGRMIQTDDRRLNLTSRLILLLLPILVFALYCMHVSTTDSLANKFSRAL HHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDTPSMWDSVYDAQRNGPLVAFTRQLNPKIMDKPSNYSEETMKKVAARYQKKAEMINASR CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC TNNLTDSTVVYVLSESFSDPSRVPGLKTSKDSMPNIRKIKAGTTSGLMLSSGYGGGTANL CCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCE EYMGLSGLSMANFDSSLSSPYQQLVPSQHWTPTINQMWGAPANSLGYHPYESSMYSRATN EEECCCCCCHHCCCHHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC YKKFGFSHFYTLTGPDVIKYQDKIDESPYVSDKSSYDSALEGIKSGKTNKFIQIITMQNH CHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC MPYHEWYENNDYTAESTTGTPLGDDEQQSIETYQKGVEITDQATQEFLNELDALDKPVTV CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VFYGDHLPGIYSSASEDDNNSLALHLTDYFIWSNKASGSQGNKASDAAYSSPNFFVAQAA EEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECH DHMNAKVSPYLAFLTEMHSKIAAMEPPVVNKIQGWDRIPEGQSIYLDQNGNPMSTDDFDK HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHH ETKQLLADYKLIQYDITAGKNYLKDTDFMTLP HHHHHHHHHHHEEEEECCCCCHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10419956; 11481430 [H]