Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is mtaD [H]

Identifier: 213692813

GI number: 213692813

Start: 2133722

End: 2135095

Strand: Direct

Name: mtaD [H]

Synonym: Blon_1953

Alternate gene names: 213692813

Gene position: 2133722-2135095 (Clockwise)

Preceding gene: 213692812

Following gene: 213692814

Centisome position: 75.32

GC content: 60.77

Gene sequence:

>1374_bases
ATGACCGACAACACCTGGCCGACCGTCGATACCGAGCTTATCGATGATGTGACACTGTATTCTGCCAAACTCATCATCCC
CGTGACGGGCCCCGTCATCATCGATGGCGCAGTTGCCATACATGGCGACCGCGTGGTTCATGTAGGTAAACGCCGCTGGG
TGCTGGAGGCGCTGAAGCAGGAAATGACGTCTCACGGCACCATCCGTGAACGGCATTGGGATGGGGTGCTCACCCCCGGA
TTGGTCAACGCGCACACTCATCTGCAGTACAGCGGCATGGTGCAGGTCGGGCAAGGCACCTACGATCGGTTCCGCGCCTG
GGAACTGGCATTCAACGAGGTGTACGCCGAGGCGCAGAAGACCCAGCCATGGAAGCAGTGGGCCGAGGACGGTGCTCGCC
AGATGGTCGAATCGGGAACGACGGCCGCCGCAGACATCGTCACCGATTTGGACGCCGCCGGCGCGCTGGCTTCGCAGGGC
ATGCACGGCATCGCTTATTGGGAGGTAATGGGCTGGCACAACGACGAATGGATGGAAAAGGGCCGCACCGAGCTCATCCG
GCAGTTGCGCCGGATGAACGAGGAGCAGCTGCCGAACCTCGGCATCAGCCCGCATGCTCCGTATACGCTGGAGTCCGAAC
CGTTCGTTGATCTTCCAGACATTGCTCGTCAGCTGAACATGCGACTGCATATCCATCTGGCGGAGACCCCGCTCGAGGCC
GGCACTTATCCGCCGGTGCTCACCACTTATTCGGCGTCCGACTGGCGTGACCACGATTGGGAAAGCTACCGGCAGCTCAA
AGACGTGGGCAAAGGTGCCTCCGCCATCCAGTTCGTCGATCAGCTTGGCTCGCTTGGCCCGGATGTGCACATTGCACACG
GCGTGTGGGCCAATGGCGAGGATCGGCGTATTCTACGTCAGCGCGGCGTGGGCGTGGCCTTGTGCCCCCGATCGAATCGC
ATTACCAACACCGGCAAAGATGCACCGGTGCGCGAATACCTCGAGGAAGGTAATCTGGTAAGCGTGGGCACCGATTCGCT
CTCCAGCACGCCGACCCTCGATCTGCTTGATGACGTGTCGATGCTTTACGACCTGGCCCGCGAACAAGGCTATGCCAGCG
ACGATCTGACACATCGCCTGATTCGTATGATGACGCTGGGCGGTGCCGCCTCCATGGGTATGCACGTGGGCCGAAACCGC
ATTGGACAGATCAACGCGGGCGCATTGGCTGATTTCGCGTTCTTCGACATCCCCGTCGACACATCATCTCCGGCCGGCAT
CGAAGAAACGCTGGAAACACTGGTGAAGCACGGTGCAGGCACGAACCGAGCCACGGTGATATCCGGGCGCGAAGCCTACA
ACAACGTCTGGTGA

Upstream 100 bases:

>100_bases
CGGCTACGATTGGCGACTGACCAGATTCGCGGAAAACGACCGAGAGAACGCCGACCGATAGCCATAGACACGGCACCGAA
CACAACGCAGCGAGGAGAAT

Downstream 100 bases:

>100_bases
CACCGCTGACCCGACCTGATATCAAGAAGCCAAAAACCAGCAAACCCGCCAAGAACAGGAGATCTCATTATGAGCGTCGC
TTTGCGAGACATGAGTCCAT

Product: amidohydrolase

Products: NA

Alternate protein names: MTA/SAH deaminase [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPG
LVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQG
MHGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA
GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNR
ITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNR
IGQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW

Sequences:

>Translated_457_residues
MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPG
LVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQG
MHGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA
GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNR
ITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNR
IGQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW
>Mature_456_residues
TDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQEMTSHGTIRERHWDGVLTPGL
VNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQKTQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGM
HGIAYWEVMGWHNDEWMEKGRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEAG
TYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGEDRRILRQRGVGVALCPRSNRI
TNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVSMLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRI
GQINAGALADFAFFDIPVDTSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW

Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTA/SAH deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.4.28 [H]

Molecular weight: Translated: 50625; Mature: 50494

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQ
CCCCCCCCCCHHHHHHHHEEEEEEEEEECCCEEECCEEEEECCEEEEECHHHHHHHHHHH
EMTSHGTIRERHWDGVLTPGLVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQK
HHHHCCCCCHHCCCCCCCCCEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHC
TQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGMHGIAYWEVMGWHNDEWMEK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
GRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA
HHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCC
GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGE
CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC
DRRILRQRGVGVALCPRSNRITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVS
HHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH
MLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRIGQINAGALADFAFFDIPVD
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCC
TSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW
CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCCC
>Mature Secondary Structure 
TDNTWPTVDTELIDDVTLYSAKLIIPVTGPVIIDGAVAIHGDRVVHVGKRRWVLEALKQ
CCCCCCCCCHHHHHHHHEEEEEEEEEECCCEEECCEEEEECCEEEEECHHHHHHHHHHH
EMTSHGTIRERHWDGVLTPGLVNAHTHLQYSGMVQVGQGTYDRFRAWELAFNEVYAEAQK
HHHHCCCCCHHCCCCCCCCCEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHC
TQPWKQWAEDGARQMVESGTTAAADIVTDLDAAGALASQGMHGIAYWEVMGWHNDEWMEK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
GRTELIRQLRRMNEEQLPNLGISPHAPYTLESEPFVDLPDIARQLNMRLHIHLAETPLEA
HHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCC
GTYPPVLTTYSASDWRDHDWESYRQLKDVGKGASAIQFVDQLGSLGPDVHIAHGVWANGE
CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC
DRRILRQRGVGVALCPRSNRITNTGKDAPVREYLEEGNLVSVGTDSLSSTPTLDLLDDVS
HHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH
MLYDLAREQGYASDDLTHRLIRMMTLGGAASMGMHVGRNRIGQINAGALADFAFFDIPVD
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCC
TSSPAGIEETLETLVKHGAGTNRATVISGREAYNNVW
CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA