| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692795
Identifier: 213692795
GI number: 213692795
Start: 2110896
End: 2111612
Strand: Direct
Name: 213692795
Synonym: Blon_1933
Alternate gene names: NA
Gene position: 2110896-2111612 (Clockwise)
Preceding gene: 213692794
Following gene: 213692797
Centisome position: 74.52
GC content: 42.54
Gene sequence:
>717_bases ATGTCAGGCATTATAAAATCTGAACTGAGGAAAGCTTTTGGTACTCGTGCGAGCATAGCTATAACCTTGGTCACCTTGCT GTTGACCGTTGGAATGAGCATTTGGTCGGCTGTATTGCTGGAAGCTGGGGAGTCTTGGTACATACCTTTCAAACAGGTGG CGAGTCCCCTAATCACTATAAGCCCACTCCTAATCATTCTTTTGGTTTGTGAGGAGTGGGATAAGGATAGTGCGCTAGTA ACTTTTACGCAGGTTCCCAAGCGGTCTCGAATTGTGATTGCTAAAACTGTGGTAGCGGTCTTGATTTTCTCAGCTAGTTT TGCCGCTTCATTACTATTAACATTGATTGTTTCAGTTACTACATCGAGTATTCATCATTTTAGTCTAGATTGGAAAGCTT CACTATCGGGCTTTCTAACTCTTGCGCTACCGTTGTTGGTGAATATGGGTCTGGGGCTCGCTATGGCTTTATTCTCGCAA TCTACCGTAATTTCAATCTCATTGTATTTCATCATTCCTCCGGTCACAGTGATGCTATCGCAGATAAATTCCATATCAGA ATATGCTAGATGGATTTCGCTGGGACACTCGTCTTCAATTTTTGTAGCCGGTCTAACCCCTCAAACTTATTCTCAGATTG TTGTTTCAGTGATTTTCTGGATAGTTCTGCCGTTCGTACTAGGTTTTGTGAACATCTGCAGACGAGATATTTCATAG
Upstream 100 bases:
>100_bases GAGTTCTATTTGGAACAAACCGCGAGTGTCTCTCGGGGAAGTGTGGTTAACAATGGCTAATAATCTTAATGATTATGTCA AACCTGTTTCAGATTCAAAG
Downstream 100 bases:
>100_bases CCCTAACTTGATGCACTTTTGCCGAAAAAACATTGAACATAAACACGAGACCACCCTACCGGCGGACACGCCGCGAACGC CCGGCCCGCCGACTTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSGIIKSELRKAFGTRASIAITLVTLLLTVGMSIWSAVLLEAGESWYIPFKQVASPLITISPLLIILLVCEEWDKDSALV TFTQVPKRSRIVIAKTVVAVLIFSASFAASLLLTLIVSVTTSSIHHFSLDWKASLSGFLTLALPLLVNMGLGLAMALFSQ STVISISLYFIIPPVTVMLSQINSISEYARWISLGHSSSIFVAGLTPQTYSQIVVSVIFWIVLPFVLGFVNICRRDIS
Sequences:
>Translated_238_residues MSGIIKSELRKAFGTRASIAITLVTLLLTVGMSIWSAVLLEAGESWYIPFKQVASPLITISPLLIILLVCEEWDKDSALV TFTQVPKRSRIVIAKTVVAVLIFSASFAASLLLTLIVSVTTSSIHHFSLDWKASLSGFLTLALPLLVNMGLGLAMALFSQ STVISISLYFIIPPVTVMLSQINSISEYARWISLGHSSSIFVAGLTPQTYSQIVVSVIFWIVLPFVLGFVNICRRDIS >Mature_237_residues SGIIKSELRKAFGTRASIAITLVTLLLTVGMSIWSAVLLEAGESWYIPFKQVASPLITISPLLIILLVCEEWDKDSALVT FTQVPKRSRIVIAKTVVAVLIFSASFAASLLLTLIVSVTTSSIHHFSLDWKASLSGFLTLALPLLVNMGLGLAMALFSQS TVISISLYFIIPPVTVMLSQINSISEYARWISLGHSSSIFVAGLTPQTYSQIVVSVIFWIVLPFVLGFVNICRRDIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25922; Mature: 25791
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIIKSELRKAFGTRASIAITLVTLLLTVGMSIWSAVLLEAGESWYIPFKQVASPLITI CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHH SPLLIILLVCEEWDKDSALVTFTQVPKRSRIVIAKTVVAVLIFSASFAASLLLTLIVSVT HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSSIHHFSLDWKASLSGFLTLALPLLVNMGLGLAMALFSQSTVISISLYFIIPPVTVMLS HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH QINSISEYARWISLGHSSSIFVAGLTPQTYSQIVVSVIFWIVLPFVLGFVNICRRDIS HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGIIKSELRKAFGTRASIAITLVTLLLTVGMSIWSAVLLEAGESWYIPFKQVASPLITI CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHH SPLLIILLVCEEWDKDSALVTFTQVPKRSRIVIAKTVVAVLIFSASFAASLLLTLIVSVT HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSSIHHFSLDWKASLSGFLTLALPLLVNMGLGLAMALFSQSTVISISLYFIIPPVTVMLS HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH QINSISEYARWISLGHSSSIFVAGLTPQTYSQIVVSVIFWIVLPFVLGFVNICRRDIS HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA