| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ltaE [H]
Identifier: 213692797
GI number: 213692797
Start: 2113327
End: 2114352
Strand: Direct
Name: ltaE [H]
Synonym: Blon_1935
Alternate gene names: 213692797
Gene position: 2113327-2114352 (Clockwise)
Preceding gene: 213692795
Following gene: 213692800
Centisome position: 74.6
GC content: 60.62
Gene sequence:
>1026_bases ATGCTGTCTTTTGAGAACGATTACTCCCGCGCCGCCCATCCCGCAGTGCTTGAAGCCGTGGCTGAAGCCAACAACCATCT GTATCCGGGCTACGGGTCCGACGAACTGAGCGATCAGGCCAAGGCCAAGATCCGCGAGGCCTGCGGCCAGCCGGACGCGG ATGTGTGGTTCCTCGTCGGCGGCACGCAGACCAACCAGGTCGTCATCGACACCATCACCCCGGCGTATGCAGGCGTGGTC GCGGTCGCCTCCGGCCATCCGAACGTGCACGAGGCCGGCGCCATCGAGTTCTCGGGCCACAAGGTGCTTACGATTCCCCA GCACAACGGCAAAATGGATCCAACCGAACTGGACGAGTTCTGCAAGACCTTCTATGCGGACGGCAACTACGAGCACATGG TGTTCCCTGGATCCGTGTACGTCTCGCAAAGCACCGAATATGGCACCATCTACTCCAAAGCCGAACTGCAGGCTATCGCC GATGTGGCGCATAAGTACGATATGCCGCTGTTCGTGGATGGCGCGCGACTCGGCTACGCGCTGACCGCCACTGGTTCCGA CATGACGCTCACGGATCTGGCGACCATCGCCGACGTGTTCTACATCGGCGGTACCAAGGTGGGTGCGCTGTTCGGCGAGG CCGTGGTGTTTACCAAGCACAACACGCCGAAGCACTTCCTGACCCGCATCAAGCAGCACGGCGCCTTGCTGGCCAAGGGC TTCGTGCTGGGCGCGCAGTTTGACGCCTTATTCACCGACAACCTGTATTTCAAGATTGCCCGCAGCGCCAATGAGGCGGC CGATCGTATTCGCGAGGCCCTGCGCGCCAAGGGCTACATGCTCACTTTCGAAGCGCCCACCAACCAGATTTTCGTGACGA TGGATCAGCCGACCATCGACCGTCTGGAGCGCGAGGTCAAGCTCGGCTTTACCGAGAAGGCCGACGACACGCATACCGTG ATGCGCATCTGCACCAGCTGGGCCACCACGCATGAAGAGGTCGATCAGCTTATTGAGGTGTTGTAA
Upstream 100 bases:
>100_bases AGGGTTTTGTTTTTCCTGAATTCCCCGCTCCTGCAGGGAACCACCGCGTTGTACACTCGGGCATATCCAATTCACCGAAC ATAAGGACAAAAGGTCCGTC
Downstream 100 bases:
>100_bases AACCCTTCGCTAATCTCTCTCTCCGTCATCGCTTCGCGATGCCACCTCCCTCATCAGAGGGAGGTTTTTTCGTAGCTCCC GCCGATGAGGGAGCTGGCCG
Product: Threonine aldolase
Products: NA
Alternate protein names: Low specificity L-TA [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLSFENDYSRAAHPAVLEAVAEANNHLYPGYGSDELSDQAKAKIREACGQPDADVWFLVGGTQTNQVVIDTITPAYAGVV AVASGHPNVHEAGAIEFSGHKVLTIPQHNGKMDPTELDEFCKTFYADGNYEHMVFPGSVYVSQSTEYGTIYSKAELQAIA DVAHKYDMPLFVDGARLGYALTATGSDMTLTDLATIADVFYIGGTKVGALFGEAVVFTKHNTPKHFLTRIKQHGALLAKG FVLGAQFDALFTDNLYFKIARSANEAADRIREALRAKGYMLTFEAPTNQIFVTMDQPTIDRLEREVKLGFTEKADDTHTV MRICTSWATTHEEVDQLIEVL
Sequences:
>Translated_341_residues MLSFENDYSRAAHPAVLEAVAEANNHLYPGYGSDELSDQAKAKIREACGQPDADVWFLVGGTQTNQVVIDTITPAYAGVV AVASGHPNVHEAGAIEFSGHKVLTIPQHNGKMDPTELDEFCKTFYADGNYEHMVFPGSVYVSQSTEYGTIYSKAELQAIA DVAHKYDMPLFVDGARLGYALTATGSDMTLTDLATIADVFYIGGTKVGALFGEAVVFTKHNTPKHFLTRIKQHGALLAKG FVLGAQFDALFTDNLYFKIARSANEAADRIREALRAKGYMLTFEAPTNQIFVTMDQPTIDRLEREVKLGFTEKADDTHTV MRICTSWATTHEEVDQLIEVL >Mature_341_residues MLSFENDYSRAAHPAVLEAVAEANNHLYPGYGSDELSDQAKAKIREACGQPDADVWFLVGGTQTNQVVIDTITPAYAGVV AVASGHPNVHEAGAIEFSGHKVLTIPQHNGKMDPTELDEFCKTFYADGNYEHMVFPGSVYVSQSTEYGTIYSKAELQAIA DVAHKYDMPLFVDGARLGYALTATGSDMTLTDLATIADVFYIGGTKVGALFGEAVVFTKHNTPKHFLTRIKQHGALLAKG FVLGAQFDALFTDNLYFKIARSANEAADRIREALRAKGYMLTFEAPTNQIFVTMDQPTIDRLEREVKLGFTEKADDTHTV MRICTSWATTHEEVDQLIEVL
Specific function: Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde. Can also act on L-erythro- phenylserine, L-threo-phenylserine, L-beta-3,4- methylenedioxyphenylserine and L-beta-3,4-dihydroxyphenylserine [H]
COG id: COG2008
COG function: function code E; Threonine aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001597 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01212 Beta_elim_lyase [H]
EC number: =4.1.2.5 [H]
Molecular weight: Translated: 37415; Mature: 37415
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFENDYSRAAHPAVLEAVAEANNHLYPGYGSDELSDQAKAKIREACGQPDADVWFLVG CCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE GTQTNQVVIDTITPAYAGVVAVASGHPNVHEAGAIEFSGHKVLTIPQHNGKMDPTELDEF CCCCCEEEEEECCCHHHCEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHH CKTFYADGNYEHMVFPGSVYVSQSTEYGTIYSKAELQAIADVAHKYDMPLFVDGARLGYA HHHHHCCCCEEEEEECCEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCEE LTATGSDMTLTDLATIADVFYIGGTKVGALFGEAVVFTKHNTPKHFLTRIKQHGALLAKG EEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCHHHHHHHHHHCCCEEEHH FVLGAQFDALFTDNLYFKIARSANEAADRIREALRAKGYMLTFEAPTNQIFVTMDQPTID EEEECEECEEEECCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCHHH RLEREVKLGFTEKADDTHTVMRICTSWATTHEEVDQLIEVL HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC >Mature Secondary Structure MLSFENDYSRAAHPAVLEAVAEANNHLYPGYGSDELSDQAKAKIREACGQPDADVWFLVG CCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE GTQTNQVVIDTITPAYAGVVAVASGHPNVHEAGAIEFSGHKVLTIPQHNGKMDPTELDEF CCCCCEEEEEECCCHHHCEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHH CKTFYADGNYEHMVFPGSVYVSQSTEYGTIYSKAELQAIADVAHKYDMPLFVDGARLGYA HHHHHCCCCEEEEEECCEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCEE LTATGSDMTLTDLATIADVFYIGGTKVGALFGEAVVFTKHNTPKHFLTRIKQHGALLAKG EEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCHHHHHHHHHHCCCEEEHH FVLGAQFDALFTDNLYFKIARSANEAADRIREALRAKGYMLTFEAPTNQIFVTMDQPTID EEEECEECEEEECCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCHHH RLEREVKLGFTEKADDTHTVMRICTSWATTHEEVDQLIEVL HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9464392 [H]