| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692775
Identifier: 213692775
GI number: 213692775
Start: 2087287
End: 2089596
Strand: Reverse
Name: 213692775
Synonym: Blon_1911
Alternate gene names: NA
Gene position: 2089596-2087287 (Counterclockwise)
Preceding gene: 213692776
Following gene: 213692774
Centisome position: 73.77
GC content: 55.45
Gene sequence:
>2310_bases ATGCTCAAGAAAATACTGAGGGATTGCAGAACCAACGCAATGTCCCTAAGCGCCATAGCAGTGCTCGTGTTCCTTACCCT ATTCGTTTTCTCAGGACTGTTGTCTGCGGCCCACGGCATGAGCTACGAATTCGAACGATGGTCTATGCAAACCAACTTGG CCGATGCGTGGGTGAGCGTGCGATCCGCAGGTGCGACGCTCACCGATGAAGTCAACAATGCCAAGCACGTGTCGCATGCC GACGGATCGCTGATCGTCACCGCCTCGATGAAACGTAGCGGAGCGAACAAGCTGCTCACCGTCAACCTCAAAGACTCCAA CGAAGTGTCCCGCCCACTCGTCAATGACGGCGAACAATTCGACACTAAGAAAAAGAACTCCATCTGGATTGACAAGAACT TCGCCGACGCCAATCACATCAGCACCGGGGATACAGTCACCATCAATGTAAACAAGTCCCCGATCGCATTGACTGTACGG GGCCTCATCGCCAGTCCGGAGTACATCGGCTACACCAGCCCAATGAACGACATGGTGGCGAATCACGACCACTACGGGTA CGCATACACTAATCGTGCATCGCTGCCCGTGACTTTGGACCGCATCAACAGCATAGCGGTCAAAGCCGAACCTGGCTGCG ATACCGGCTGCATCGCCCGTTCCGTTCGAGACACGCTAGGCAACGCAGCCGTCAGCGTGCAAGGCCGCGACGCCAGAACC GAGATTTCGAAGTTCCAAGCCAAAACCGCGAGCATGTATCGCATGTCGTACATGTTCTCCACGTTGATGATTGTATTGGT GACGCTGACCACCATCACCACTATCAGCCGACTGGTCAACAGCCAGCGCAGCTCATTGGGACTGATGAGAGCGCTGGGCA TATCTCGCAGCGCCCTGATCTTCGGATATCAGATATATGCGATTATCGCAACGCTTCCCAGCGCCCTCCTCGGCCTGTTC CTCGGACCCGCGCTTCTGGGACGGCTGTTTCTGGACAAACAACGGTTCCTGTTCAATCTTCCCCATTGGCAGGTCCGCAT CGACAACGCCAGCTGGCTCATGATGCTAGGCATCATCATCGTCAGCAGCATCGCCTCCATCATTCCAGCATTCCGCATCA CCCGCCTGACGCCCGCCATGATCCTAGACACGAACACCATGCGCGGCGTCGGCACCATGCGATCAACACCGCGCAACCCG CGCCGCGACAGCCAACAACACTGGCAATGGCACTGGATCATGCGGGATAAATCACGTTCCATGGTCAAAGAAGGCATCTC CGTCGTGGCGATTATCGGCGCGACCGTTCTGGTGATGGCAAGCTTCGGTGTGCGTCTCTCGCTCACCGCCACCAACGATA TGACATATGGCGACGTATTCCGCTACGGTCGGCAAATCCAGCTTGCCAACGGATATACCGACACAGATTACGACACAATC ATGAGCGGCTTGCCGGATAACGCGCAAAGCCTCGAACAACTGCCCATCACTGTTACAACGGCGCATCACGAACAGTCATC CGTCATGTCCATCGCCACACCCGGCATATTCCTCACGGCACGTGACGACAAGCGCGAATCTATGCCAATCACTACGCAAA CCGATGGTGCGTACATTTCTGAAGGACTGTCGAAAGCTCTCGGAGTCACCAGTGGCGACACTATTAGCGTCGACTCGGCC AGCATGTCAGAACCGGTCATCATGACCGTTATCGACATCGTGCGCGTCAGCAGCCCGCAAGGCATATACCTCAGTTCAGC ATATTGGAAGAACCTCGGCGAAACGTTCCACCCCACCAGCATCATGGTCAATGGCCGCGTGCCCAGTTCCGTTGATAACC ATCCGGCGGTGCAGCGGGTGGACTCCCTCGCATGGGACAAGGCGCAGGCCAACAAAGTGCTGGACACCTTCCAAAGCATC CTGACATTGCTGATGGTTTTCGCGGTACTGCTGGAATGGTTCATCCTGTACAGCATCGGCACACTGAACTACACCGAACG ATACCGGGAATACGCAACCATGCGAGTGCTCGGCTTCCACATCAAGGAAATCCGGTCCATCATGCTCAAAGACAGCTTCG TCACTTGGATTCTGGGCACAACCCTCGGCATCCCCCTGGGCATAGGCTTCCTGAACGCATATGTGTCCGTCGCCGATTCC AAGGACGCGCAATTTTTCGCATATCTTCCCACACCATACATCGCGTTGTCGGCCCTGTTCGTGTTATGCAACATGCTGAT TATCGAACTCGTCATCGCGAAACGAATCGCCAACATCGATCTCTCGTCCGCGCTGAAAAGCGTCGAATAG
Upstream 100 bases:
>100_bases CGCCGATGTGGTCGTCACCATCAAAGACGGCAAAACCGAATCCGTGCAGCGAAACAACAATCCGGAATCCATTACCCAAA TCCAGTGGTAGGCGTCTTCT
Downstream 100 bases:
>100_bases TAAGAAAAGAGGAATCTATGACTATAGGAATCAGCTCTGCAGGAATCTCCGTGCCAATCCGAAGATTGCCGGTGATCGAC ACCGTATCACAGTGGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: Peptide ABC Transporter Permease; Permease Domain Protein; ABC Transporter Permease; Efflux ABC Transporter Permease Protein; Permease; Efflux ABC Transporter Permease; ABC Transporter; Antimicrobial Peptide ABC Transporter Permease; ABC-Type Antimicrobial Peptide Transport System Protein; ABC-Type Transport System
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MLKKILRDCRTNAMSLSAIAVLVFLTLFVFSGLLSAAHGMSYEFERWSMQTNLADAWVSVRSAGATLTDEVNNAKHVSHA DGSLIVTASMKRSGANKLLTVNLKDSNEVSRPLVNDGEQFDTKKKNSIWIDKNFADANHISTGDTVTINVNKSPIALTVR GLIASPEYIGYTSPMNDMVANHDHYGYAYTNRASLPVTLDRINSIAVKAEPGCDTGCIARSVRDTLGNAAVSVQGRDART EISKFQAKTASMYRMSYMFSTLMIVLVTLTTITTISRLVNSQRSSLGLMRALGISRSALIFGYQIYAIIATLPSALLGLF LGPALLGRLFLDKQRFLFNLPHWQVRIDNASWLMMLGIIIVSSIASIIPAFRITRLTPAMILDTNTMRGVGTMRSTPRNP RRDSQQHWQWHWIMRDKSRSMVKEGISVVAIIGATVLVMASFGVRLSLTATNDMTYGDVFRYGRQIQLANGYTDTDYDTI MSGLPDNAQSLEQLPITVTTAHHEQSSVMSIATPGIFLTARDDKRESMPITTQTDGAYISEGLSKALGVTSGDTISVDSA SMSEPVIMTVIDIVRVSSPQGIYLSSAYWKNLGETFHPTSIMVNGRVPSSVDNHPAVQRVDSLAWDKAQANKVLDTFQSI LTLLMVFAVLLEWFILYSIGTLNYTERYREYATMRVLGFHIKEIRSIMLKDSFVTWILGTTLGIPLGIGFLNAYVSVADS KDAQFFAYLPTPYIALSALFVLCNMLIIELVIAKRIANIDLSSALKSVE
Sequences:
>Translated_769_residues MLKKILRDCRTNAMSLSAIAVLVFLTLFVFSGLLSAAHGMSYEFERWSMQTNLADAWVSVRSAGATLTDEVNNAKHVSHA DGSLIVTASMKRSGANKLLTVNLKDSNEVSRPLVNDGEQFDTKKKNSIWIDKNFADANHISTGDTVTINVNKSPIALTVR GLIASPEYIGYTSPMNDMVANHDHYGYAYTNRASLPVTLDRINSIAVKAEPGCDTGCIARSVRDTLGNAAVSVQGRDART EISKFQAKTASMYRMSYMFSTLMIVLVTLTTITTISRLVNSQRSSLGLMRALGISRSALIFGYQIYAIIATLPSALLGLF LGPALLGRLFLDKQRFLFNLPHWQVRIDNASWLMMLGIIIVSSIASIIPAFRITRLTPAMILDTNTMRGVGTMRSTPRNP RRDSQQHWQWHWIMRDKSRSMVKEGISVVAIIGATVLVMASFGVRLSLTATNDMTYGDVFRYGRQIQLANGYTDTDYDTI MSGLPDNAQSLEQLPITVTTAHHEQSSVMSIATPGIFLTARDDKRESMPITTQTDGAYISEGLSKALGVTSGDTISVDSA SMSEPVIMTVIDIVRVSSPQGIYLSSAYWKNLGETFHPTSIMVNGRVPSSVDNHPAVQRVDSLAWDKAQANKVLDTFQSI LTLLMVFAVLLEWFILYSIGTLNYTERYREYATMRVLGFHIKEIRSIMLKDSFVTWILGTTLGIPLGIGFLNAYVSVADS KDAQFFAYLPTPYIALSALFVLCNMLIIELVIAKRIANIDLSSALKSVE >Mature_769_residues MLKKILRDCRTNAMSLSAIAVLVFLTLFVFSGLLSAAHGMSYEFERWSMQTNLADAWVSVRSAGATLTDEVNNAKHVSHA DGSLIVTASMKRSGANKLLTVNLKDSNEVSRPLVNDGEQFDTKKKNSIWIDKNFADANHISTGDTVTINVNKSPIALTVR GLIASPEYIGYTSPMNDMVANHDHYGYAYTNRASLPVTLDRINSIAVKAEPGCDTGCIARSVRDTLGNAAVSVQGRDART EISKFQAKTASMYRMSYMFSTLMIVLVTLTTITTISRLVNSQRSSLGLMRALGISRSALIFGYQIYAIIATLPSALLGLF LGPALLGRLFLDKQRFLFNLPHWQVRIDNASWLMMLGIIIVSSIASIIPAFRITRLTPAMILDTNTMRGVGTMRSTPRNP RRDSQQHWQWHWIMRDKSRSMVKEGISVVAIIGATVLVMASFGVRLSLTATNDMTYGDVFRYGRQIQLANGYTDTDYDTI MSGLPDNAQSLEQLPITVTTAHHEQSSVMSIATPGIFLTARDDKRESMPITTQTDGAYISEGLSKALGVTSGDTISVDSA SMSEPVIMTVIDIVRVSSPQGIYLSSAYWKNLGETFHPTSIMVNGRVPSSVDNHPAVQRVDSLAWDKAQANKVLDTFQSI LTLLMVFAVLLEWFILYSIGTLNYTERYREYATMRVLGFHIKEIRSIMLKDSFVTWILGTTLGIPLGIGFLNAYVSVADS KDAQFFAYLPTPYIALSALFVLCNMLIIELVIAKRIANIDLSSALKSVE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84770; Mature: 84770
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKILRDCRTNAMSLSAIAVLVFLTLFVFSGLLSAAHGMSYEFERWSMQTNLADAWVSV CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RSAGATLTDEVNNAKHVSHADGSLIVTASMKRSGANKLLTVNLKDSNEVSRPLVNDGEQF HHCCCEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH DTKKKNSIWIDKNFADANHISTGDTVTINVNKSPIALTVRGLIASPEYIGYTSPMNDMVA CCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCHHHHHC NHDHYGYAYTNRASLPVTLDRINSIAVKAEPGCDTGCIARSVRDTLGNAAVSVQGRDART CCCCCCEEEECCCCCCEEHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCHHH EISKFQAKTASMYRMSYMFSTLMIVLVTLTTITTISRLVNSQRSSLGLMRALGISRSALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FGYQIYAIIATLPSALLGLFLGPALLGRLFLDKQRFLFNLPHWQVRIDNASWLMMLGIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHH VSSIASIIPAFRITRLTPAMILDTNTMRGVGTMRSTPRNPRRDSQQHWQWHWIMRDKSRS HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH MVKEGISVVAIIGATVLVMASFGVRLSLTATNDMTYGDVFRYGRQIQLANGYTDTDYDTI HHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHH MSGLPDNAQSLEQLPITVTTAHHEQSSVMSIATPGIFLTARDDKRESMPITTQTDGAYIS HHCCCCCHHHHHHCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCEECCCCHHHH EGLSKALGVTSGDTISVDSASMSEPVIMTVIDIVRVSSPQGIYLSSAYWKNLGETFHPTS HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCE IMVNGRVPSSVDNHPAVQRVDSLAWDKAQANKVLDTFQSILTLLMVFAVLLEWFILYSIG EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLNYTERYREYATMRVLGFHIKEIRSIMLKDSFVTWILGTTLGIPLGIGFLNAYVSVADS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDAQFFAYLPTPYIALSALFVLCNMLIIELVIAKRIANIDLSSALKSVE CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MLKKILRDCRTNAMSLSAIAVLVFLTLFVFSGLLSAAHGMSYEFERWSMQTNLADAWVSV CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RSAGATLTDEVNNAKHVSHADGSLIVTASMKRSGANKLLTVNLKDSNEVSRPLVNDGEQF HHCCCEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH DTKKKNSIWIDKNFADANHISTGDTVTINVNKSPIALTVRGLIASPEYIGYTSPMNDMVA CCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCHHHHHC NHDHYGYAYTNRASLPVTLDRINSIAVKAEPGCDTGCIARSVRDTLGNAAVSVQGRDART CCCCCCEEEECCCCCCEEHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCHHH EISKFQAKTASMYRMSYMFSTLMIVLVTLTTITTISRLVNSQRSSLGLMRALGISRSALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FGYQIYAIIATLPSALLGLFLGPALLGRLFLDKQRFLFNLPHWQVRIDNASWLMMLGIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHH VSSIASIIPAFRITRLTPAMILDTNTMRGVGTMRSTPRNPRRDSQQHWQWHWIMRDKSRS HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH MVKEGISVVAIIGATVLVMASFGVRLSLTATNDMTYGDVFRYGRQIQLANGYTDTDYDTI HHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHH MSGLPDNAQSLEQLPITVTTAHHEQSSVMSIATPGIFLTARDDKRESMPITTQTDGAYIS HHCCCCCHHHHHHCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCEECCCCHHHH EGLSKALGVTSGDTISVDSASMSEPVIMTVIDIVRVSSPQGIYLSSAYWKNLGETFHPTS HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCE IMVNGRVPSSVDNHPAVQRVDSLAWDKAQANKVLDTFQSILTLLMVFAVLLEWFILYSIG EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLNYTERYREYATMRVLGFHIKEIRSIMLKDSFVTWILGTTLGIPLGIGFLNAYVSVADS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDAQFFAYLPTPYIALSALFVLCNMLIIELVIAKRIANIDLSSALKSVE CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA