| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692774
Identifier: 213692774
GI number: 213692774
Start: 2085507
End: 2086868
Strand: Reverse
Name: 213692774
Synonym: Blon_1910
Alternate gene names: NA
Gene position: 2086868-2085507 (Counterclockwise)
Preceding gene: 213692775
Following gene: 213692772
Centisome position: 73.67
GC content: 52.79
Gene sequence:
>1362_bases ATGTTGAAGCGCAAGATGCTGGATAAGCTGATCGCATGGAAACAAAAAGCGGGTGGGCGTGAGTCGCTTCTCATCGAAGG CGCTCGCCGCGTGGGCAAAAGTACCATTGTCGAGGAATTCGGCCGCACTCAGTACAAGTCATATATTCTCATCGATTTCG CGCGTTTGCCGCGCGACGTTCGCGACATCTTCGAAAACCAGCGTGATGACTTTGACACATTTTTCATGCTGTTGTCTGCG TATTACCGCACAAGACTGTATGAGCGTGAATCGTTGATTATTTTCGACGAGGTACAGCGGTATCCGGCGGCGAGGGAGCT CGTCAAATATCTGGTTGCGGATGGCCGATATGACTATGTGGAAACTGGTTCGCTGATCTCCATCAAGAGGAATGTGGCGA ATATCGTCATTCCCTCCGAGGAACGGAAAATGGATATGGGGCCGCTCGATTTTGAGGAGTTCTGCTGGGCTATGGGGGAG GAGCTGCTTGCTGAAACGATTCGTAAATCGTTCGAGCGTCTGGTCCCATTGCCCGATGCTCTGCATAAACGGGGGATGAG GCTGTGGCGCGAATATCTGCTGGTGGGCGGTATGCCGCAGGTGGTTGCCGATTATGTCGAGCAGCGCGATTTTGGCGAGG TGGATTTGATCAAGCGTGGCATCCTGCAGCTGTACAGTGATGATATCGGCAAGTTCGCCAATGGCGATGCCGGCCGTGTG CGGGGCATTTTCGCTCAGATTCCAGGGCAGCTGTCCAAGCATGAGAAACGATTCACTCTGGCATCGGTCGACAAGGGTGC TCGATCTCGTGAATACGATTCGGCGTTCTTCTGGTTGGAAGACGCCCGCTTGGTGAACCTGTGCCGTAATTCGACTGACC CTTTGGTGGGACTGGGATTGTACGAAGATAACGATTCATTCAAATGCTATATGGCGGATACCGGTTTGCTGGTGTCGCAG GCGTTTGCCGATCGAGAGACAACGCCGGATGATGTGTACCGGGATATTCTGTTCGATAAACTCTCGCTCAACGAAGGGAT GCTGGTGGAGAATGCGGTGGCTCAGCAATTCCGGGCGAATGGGCGCAAACTGTATTTCTTCTCGCGCTCGGATAGAACGG ATGCCACGAAAACCATGGAAATAGACTTCCTCATCGTTCGGGAATACGATAATGCCGCGATGAAGCCTCGCATCAGCCCG ATTGAAGTGAAATCCACGAAACGATACGGCGTATCTTCGCTCGACAAATTCCGCAAAAGGTATGCCCAACGATTGGGCAA GGAATACGTTCTGCATCCCCGCCAACTCGAAGTGGATGGAGAACGCATCAAGCTGCCGCTGTATATGGCCCACTGTCTGT GA
Upstream 100 bases:
>100_bases ACCGTTGTTTTCGTGTAGAATCGGCTACCTCTATACTTCTGTTTTCGTGTAAAATAGCATATGTCCATACTGTTGTTTTC GTGTAATGAGGTGATTGCTC
Downstream 100 bases:
>100_bases CGCGAGAAGATGGATTGTGCCGAGTGCGCGGTTGAAACCCATGTTGATGAGTTCCGTCGGCTTGGTGTTGGCGGGACACG AGCCATGCTTCTATTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; NERD Domain Protein
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MLKRKMLDKLIAWKQKAGGRESLLIEGARRVGKSTIVEEFGRTQYKSYILIDFARLPRDVRDIFENQRDDFDTFFMLLSA YYRTRLYERESLIIFDEVQRYPAARELVKYLVADGRYDYVETGSLISIKRNVANIVIPSEERKMDMGPLDFEEFCWAMGE ELLAETIRKSFERLVPLPDALHKRGMRLWREYLLVGGMPQVVADYVEQRDFGEVDLIKRGILQLYSDDIGKFANGDAGRV RGIFAQIPGQLSKHEKRFTLASVDKGARSREYDSAFFWLEDARLVNLCRNSTDPLVGLGLYEDNDSFKCYMADTGLLVSQ AFADRETTPDDVYRDILFDKLSLNEGMLVENAVAQQFRANGRKLYFFSRSDRTDATKTMEIDFLIVREYDNAAMKPRISP IEVKSTKRYGVSSLDKFRKRYAQRLGKEYVLHPRQLEVDGERIKLPLYMAHCL
Sequences:
>Translated_453_residues MLKRKMLDKLIAWKQKAGGRESLLIEGARRVGKSTIVEEFGRTQYKSYILIDFARLPRDVRDIFENQRDDFDTFFMLLSA YYRTRLYERESLIIFDEVQRYPAARELVKYLVADGRYDYVETGSLISIKRNVANIVIPSEERKMDMGPLDFEEFCWAMGE ELLAETIRKSFERLVPLPDALHKRGMRLWREYLLVGGMPQVVADYVEQRDFGEVDLIKRGILQLYSDDIGKFANGDAGRV RGIFAQIPGQLSKHEKRFTLASVDKGARSREYDSAFFWLEDARLVNLCRNSTDPLVGLGLYEDNDSFKCYMADTGLLVSQ AFADRETTPDDVYRDILFDKLSLNEGMLVENAVAQQFRANGRKLYFFSRSDRTDATKTMEIDFLIVREYDNAAMKPRISP IEVKSTKRYGVSSLDKFRKRYAQRLGKEYVLHPRQLEVDGERIKLPLYMAHCL >Mature_453_residues MLKRKMLDKLIAWKQKAGGRESLLIEGARRVGKSTIVEEFGRTQYKSYILIDFARLPRDVRDIFENQRDDFDTFFMLLSA YYRTRLYERESLIIFDEVQRYPAARELVKYLVADGRYDYVETGSLISIKRNVANIVIPSEERKMDMGPLDFEEFCWAMGE ELLAETIRKSFERLVPLPDALHKRGMRLWREYLLVGGMPQVVADYVEQRDFGEVDLIKRGILQLYSDDIGKFANGDAGRV RGIFAQIPGQLSKHEKRFTLASVDKGARSREYDSAFFWLEDARLVNLCRNSTDPLVGLGLYEDNDSFKCYMADTGLLVSQ AFADRETTPDDVYRDILFDKLSLNEGMLVENAVAQQFRANGRKLYFFSRSDRTDATKTMEIDFLIVREYDNAAMKPRISP IEVKSTKRYGVSSLDKFRKRYAQRLGKEYVLHPRQLEVDGERIKLPLYMAHCL
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52670; Mature: 52670
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRKMLDKLIAWKQKAGGRESLLIEGARRVGKSTIVEEFGRTQYKSYILIDFARLPRDV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEHHHCCHHH RDIFENQRDDFDTFFMLLSAYYRTRLYERESLIIFDEVQRYPAARELVKYLVADGRYDYV HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCCCCCEE ETGSLISIKRNVANIVIPSEERKMDMGPLDFEEFCWAMGEELLAETIRKSFERLVPLPDA ECCCEEEEECCCCEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LHKRGMRLWREYLLVGGMPQVVADYVEQRDFGEVDLIKRGILQLYSDDIGKFANGDAGRV HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH RGIFAQIPGQLSKHEKRFTLASVDKGARSREYDSAFFWLEDARLVNLCRNSTDPLVGLGL HHHHHHCCCHHHHHHHHEEHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEE YEDNDSFKCYMADTGLLVSQAFADRETTPDDVYRDILFDKLSLNEGMLVENAVAQQFRAN EECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC GRKLYFFSRSDRTDATKTMEIDFLIVREYDNAAMKPRISPIEVKSTKRYGVSSLDKFRKR CCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHH YAQRLGKEYVLHPRQLEVDGERIKLPLYMAHCL HHHHHCHHHCCCCCEEEECCCEEEEEHHHHHCC >Mature Secondary Structure MLKRKMLDKLIAWKQKAGGRESLLIEGARRVGKSTIVEEFGRTQYKSYILIDFARLPRDV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEHHHCCHHH RDIFENQRDDFDTFFMLLSAYYRTRLYERESLIIFDEVQRYPAARELVKYLVADGRYDYV HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHHHHCCCCCEE ETGSLISIKRNVANIVIPSEERKMDMGPLDFEEFCWAMGEELLAETIRKSFERLVPLPDA ECCCEEEEECCCCEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LHKRGMRLWREYLLVGGMPQVVADYVEQRDFGEVDLIKRGILQLYSDDIGKFANGDAGRV HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH RGIFAQIPGQLSKHEKRFTLASVDKGARSREYDSAFFWLEDARLVNLCRNSTDPLVGLGL HHHHHHCCCHHHHHHHHEEHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEE YEDNDSFKCYMADTGLLVSQAFADRETTPDDVYRDILFDKLSLNEGMLVENAVAQQFRAN EECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC GRKLYFFSRSDRTDATKTMEIDFLIVREYDNAAMKPRISPIEVKSTKRYGVSSLDKFRKR CCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHH YAQRLGKEYVLHPRQLEVDGERIKLPLYMAHCL HHHHHCHHHCCCCCEEEECCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA