| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692767
Identifier: 213692767
GI number: 213692767
Start: 2075088
End: 2076845
Strand: Reverse
Name: 213692767
Synonym: Blon_1902
Alternate gene names: NA
Gene position: 2076845-2075088 (Counterclockwise)
Preceding gene: 213692769
Following gene: 213692766
Centisome position: 73.32
GC content: 64.28
Gene sequence:
>1758_bases ATGCCATCACACGCACGCACGGTCACCAGGACAACCCATCGCGTTCGCAACGCGCTGCTCGTCGTGCTGCTGTTGCTGGT CGTGTGCGCCGCGGCGGCCGGCTTCAGCGGATTCAAACTGTACAAGTCGGCGATGAGCGCCAAAGCGCACCTCAACAATG TCGTCAACGCGGCCAAGGTCATCAAGGACGGTTCCACCGACGACATGGTCAAGGCGCTGTCCGACGTGAGCTACATCCAG AAGGAGGCGGCCGCCGCCAAGCAGGATGTCAGCGGCGGTCTGTGGACGCTGGCGGAGAAGATGCCCGTGGTCGGTGGTGA CGTGAAGACGGCGCGCACCGCCATCGGTACCATCGAGGACTTCGCGCAGACCACGCTGCCCCAGCTGGGCAAGGTCGTCA CCACACTGACCGGTGCCAGCCTCTCCAGTGGCGATGGGCAGCTCAACATGGAGCCGATCATCGCCGCGGCGCAGCAGCTT GCCACGGTCGACCAGTCCGTGCAATCGCAGGCCAGGACGATCCAGGATCTTCCCGACGCCAAACTCGGCGTGGTGAACAA CGCGCTGCAGAACGGCAAGACGCAGATGGCCGCCCTGGCGCAGGTGACCGAAAACCTGAGCGGCATGCTCAACATGCTGC CGAACTTCCTCGGTGCGAACGGCGCCCGCAACTACGTGCTGCTGGCCCAGACGAATTCCGAGATCCGCGGAACCGGCGGC CTGATCGGTTCGGCCGGTTCCTTCAGCGCGGACAACGGCAAGATCGCGGTGGGGGAGTTCCACGCGGATGCCGAGTTCCC CTCCAACGCCGCGTTGGATGACGTCAACCAGGACGGTGACGGCACGCTGTACAGCGGACTGTACTTCGGTCAAGTCATCC ATAATCTTTCGTCTACGCCGGACTTCCCGCGCGTCGCGTCCATGGCCCAGAAGTTCTGGCAGGCGGCTCCGTTCGGCGGA TCGTCCGACGGCGTGATGTCGCTCGACCCCGTCGCGCTGCAGGCGATGATCGGCGCCACCGGCGACGTGACCCTGTCCGA CGGGCGCGTGCTCAACGGGTCGAACACCGCCGAATTCCTGCTCAACGGCGCCTACAAGGAACTGACGCCCTCCGCTCAGG ACCGGTACTTCAGCGAGACCGCCGCCCAGGCGGTCGCCCACCTGTTCAGCGACATGAACACGCAGAAGCTCATGACCGTC GCCAAGACGATGCTCCGGATGGCCGAGCAGCGGCACCTGTACTTCTGGTCGTTCCACGAGGAGGATCAGGCGGTGCTGCG CAGCGCCGGCGTCACCGGCGAGATCACCAACGACGCGAAGAACCCGGTGACCGGCGTCTACTTCAACGAGATGCAGGCCT CGAAGATGGACTGGTACATCCAGCGCAAGTCGACGGTGAAGAGGACCGGCGACAACACCTACCACGTTACGTATTCGTTC ACCAACACCCTGCAGCCGGGCGAGGCCGGATCCCTGCCAGAATACATCACGGCGAACGCCAAGGGAGGCGTGGCGGTGAA CCGCGTGGTCATCTACACGCCGGCCGGAGGCGAGGTCAGCAACGTGTCGGCGTCGAACGGCAGTTCCTTCGCACAGGTGC AGGCCAAGGACCATATGACCTACATGGACGACATCTCCCTGGCGCCTCAGGACACGGTGACCATCGAATACGACGTGACC ACCGCGGCCGGCTCGGCCAACCTCAAACTGGATCAGACGCCGACCATCGGCGACCCCGCGATCACGTACGAGTATTGA
Upstream 100 bases:
>100_bases GTGCACTGCTACGTGCCGTCCGCCGGGCTACCCGTCCAGCGAAAGCGTAAACGGTCAGCCAGCCAGTATCGATACATGTC ATAACGTAAGGAAGTAGCCC
Downstream 100 bases:
>100_bases TCGGTATTGATCTGTGGGTGTGATCTTGGGATTGTGTGCCCTTATGAAAGCGCGCCGCCGACTCCTCTCGGAACCGGTGA CGTGCTTCCGGACGACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MPSHARTVTRTTHRVRNALLVVLLLLVVCAAAAGFSGFKLYKSAMSAKAHLNNVVNAAKVIKDGSTDDMVKALSDVSYIQ KEAAAAKQDVSGGLWTLAEKMPVVGGDVKTARTAIGTIEDFAQTTLPQLGKVVTTLTGASLSSGDGQLNMEPIIAAAQQL ATVDQSVQSQARTIQDLPDAKLGVVNNALQNGKTQMAALAQVTENLSGMLNMLPNFLGANGARNYVLLAQTNSEIRGTGG LIGSAGSFSADNGKIAVGEFHADAEFPSNAALDDVNQDGDGTLYSGLYFGQVIHNLSSTPDFPRVASMAQKFWQAAPFGG SSDGVMSLDPVALQAMIGATGDVTLSDGRVLNGSNTAEFLLNGAYKELTPSAQDRYFSETAAQAVAHLFSDMNTQKLMTV AKTMLRMAEQRHLYFWSFHEEDQAVLRSAGVTGEITNDAKNPVTGVYFNEMQASKMDWYIQRKSTVKRTGDNTYHVTYSF TNTLQPGEAGSLPEYITANAKGGVAVNRVVIYTPAGGEVSNVSASNGSSFAQVQAKDHMTYMDDISLAPQDTVTIEYDVT TAAGSANLKLDQTPTIGDPAITYEY
Sequences:
>Translated_585_residues MPSHARTVTRTTHRVRNALLVVLLLLVVCAAAAGFSGFKLYKSAMSAKAHLNNVVNAAKVIKDGSTDDMVKALSDVSYIQ KEAAAAKQDVSGGLWTLAEKMPVVGGDVKTARTAIGTIEDFAQTTLPQLGKVVTTLTGASLSSGDGQLNMEPIIAAAQQL ATVDQSVQSQARTIQDLPDAKLGVVNNALQNGKTQMAALAQVTENLSGMLNMLPNFLGANGARNYVLLAQTNSEIRGTGG LIGSAGSFSADNGKIAVGEFHADAEFPSNAALDDVNQDGDGTLYSGLYFGQVIHNLSSTPDFPRVASMAQKFWQAAPFGG SSDGVMSLDPVALQAMIGATGDVTLSDGRVLNGSNTAEFLLNGAYKELTPSAQDRYFSETAAQAVAHLFSDMNTQKLMTV AKTMLRMAEQRHLYFWSFHEEDQAVLRSAGVTGEITNDAKNPVTGVYFNEMQASKMDWYIQRKSTVKRTGDNTYHVTYSF TNTLQPGEAGSLPEYITANAKGGVAVNRVVIYTPAGGEVSNVSASNGSSFAQVQAKDHMTYMDDISLAPQDTVTIEYDVT TAAGSANLKLDQTPTIGDPAITYEY >Mature_584_residues PSHARTVTRTTHRVRNALLVVLLLLVVCAAAAGFSGFKLYKSAMSAKAHLNNVVNAAKVIKDGSTDDMVKALSDVSYIQK EAAAAKQDVSGGLWTLAEKMPVVGGDVKTARTAIGTIEDFAQTTLPQLGKVVTTLTGASLSSGDGQLNMEPIIAAAQQLA TVDQSVQSQARTIQDLPDAKLGVVNNALQNGKTQMAALAQVTENLSGMLNMLPNFLGANGARNYVLLAQTNSEIRGTGGL IGSAGSFSADNGKIAVGEFHADAEFPSNAALDDVNQDGDGTLYSGLYFGQVIHNLSSTPDFPRVASMAQKFWQAAPFGGS SDGVMSLDPVALQAMIGATGDVTLSDGRVLNGSNTAEFLLNGAYKELTPSAQDRYFSETAAQAVAHLFSDMNTQKLMTVA KTMLRMAEQRHLYFWSFHEEDQAVLRSAGVTGEITNDAKNPVTGVYFNEMQASKMDWYIQRKSTVKRTGDNTYHVTYSFT NTLQPGEAGSLPEYITANAKGGVAVNRVVIYTPAGGEVSNVSASNGSSFAQVQAKDHMTYMDDISLAPQDTVTIEYDVTT AAGSANLKLDQTPTIGDPAITYEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62067; Mature: 61936
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHARTVTRTTHRVRNALLVVLLLLVVCAAAAGFSGFKLYKSAMSAKAHLNNVVNAAKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IKDGSTDDMVKALSDVSYIQKEAAAAKQDVSGGLWTLAEKMPVVGGDVKTARTAIGTIED HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH FAQTTLPQLGKVVTTLTGASLSSGDGQLNMEPIIAAAQQLATVDQSVQSQARTIQDLPDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLGVVNNALQNGKTQMAALAQVTENLSGMLNMLPNFLGANGARNYVLLAQTNSEIRGTGG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC LIGSAGSFSADNGKIAVGEFHADAEFPSNAALDDVNQDGDGTLYSGLYFGQVIHNLSSTP EEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCC DFPRVASMAQKFWQAAPFGGSSDGVMSLDPVALQAMIGATGDVTLSDGRVLNGSNTAEFL CCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCCCEEECCCEEECCCCHHHHH LNGAYKELTPSAQDRYFSETAAQAVAHLFSDMNTQKLMTVAKTMLRMAEQRHLYFWSFHE HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECC EDQAVLRSAGVTGEITNDAKNPVTGVYFNEMQASKMDWYIQRKSTVKRTGDNTYHVTYSF HHHHHHHHCCCCCEECCCCCCCCCEEEECCHHHCHHHHEEEHHHHHHHCCCCEEEEEEEE TNTLQPGEAGSLPEYITANAKGGVAVNRVVIYTPAGGEVSNVSASNGSSFAQVQAKDHMT ECCCCCCCCCCCCHHEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHCCCE YMDDISLAPQDTVTIEYDVTTAAGSANLKLDQTPTIGDPAITYEY EHHCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCEEECC >Mature Secondary Structure PSHARTVTRTTHRVRNALLVVLLLLVVCAAAAGFSGFKLYKSAMSAKAHLNNVVNAAKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IKDGSTDDMVKALSDVSYIQKEAAAAKQDVSGGLWTLAEKMPVVGGDVKTARTAIGTIED HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH FAQTTLPQLGKVVTTLTGASLSSGDGQLNMEPIIAAAQQLATVDQSVQSQARTIQDLPDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLGVVNNALQNGKTQMAALAQVTENLSGMLNMLPNFLGANGARNYVLLAQTNSEIRGTGG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC LIGSAGSFSADNGKIAVGEFHADAEFPSNAALDDVNQDGDGTLYSGLYFGQVIHNLSSTP EEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCC DFPRVASMAQKFWQAAPFGGSSDGVMSLDPVALQAMIGATGDVTLSDGRVLNGSNTAEFL CCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCCCEEECCCEEECCCCHHHHH LNGAYKELTPSAQDRYFSETAAQAVAHLFSDMNTQKLMTVAKTMLRMAEQRHLYFWSFHE HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECC EDQAVLRSAGVTGEITNDAKNPVTGVYFNEMQASKMDWYIQRKSTVKRTGDNTYHVTYSF HHHHHHHHCCCCCEECCCCCCCCCEEEECCHHHCHHHHEEEHHHHHHHCCCCEEEEEEEE TNTLQPGEAGSLPEYITANAKGGVAVNRVVIYTPAGGEVSNVSASNGSSFAQVQAKDHMT ECCCCCCCCCCCCHHEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHCCCE YMDDISLAPQDTVTIEYDVTTAAGSANLKLDQTPTIGDPAITYEY EHHCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA