| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692756
Identifier: 213692756
GI number: 213692756
Start: 2061780
End: 2062403
Strand: Direct
Name: 213692756
Synonym: Blon_1890
Alternate gene names: NA
Gene position: 2061780-2062403 (Clockwise)
Preceding gene: 213692734
Following gene: 213692757
Centisome position: 72.78
GC content: 61.38
Gene sequence:
>624_bases ATGACATGGAATCCGTTTAAGAAAAAAGAAGAGGCCCAAGTTCCTGTTGAGCAGGCCCCGAAGAAGGCCGCCGATCCTTC TGAGAAAAAAGGCCGTCCTACCCCGAAGATGAAGCAGGCTCAGGCCGCCGGTATCCGTCCGCTGGTTCCGGTGGACCGCA AGGCCAGCGCCAAGGCCGCCAAAGCCCGTCTGCGCGAGAGGGAGAACGCCGAGTACGAGGCGATGCAGAAGGGCGACATC AACCACATGCCCAAGTCGGAACGCCTGCCGTGGCGCATCTACATCCGCGACTACGTGGACGCCCGGTTCAACCTCGGCGA ATGGTTCATTCCGGTGAGCTTCGGAATCCTGATCGCCTCCATGTTCGCCGCCTCGTTGATGCGCAACCAGTGGGCGTCGG TCACCATGATGGCGCTGATGTACGGCTATCTGATCGCCGTGATCATCGACGTGTGGCTGATGTGGCGCAGGCTCAAGCCC AAGCTGATCGCCAAGTACGGCGAATCGTCCGTGGCCAAGGGCTCCCGCTCCTTCTCCTACGCCTGGAGCCGTTCCATCCA GATGCGTCGTTGGAGACTTCCCAAGCCGCGTTACCCGAAGCGCGGTCACTGGCCGGCGGACTGA
Upstream 100 bases:
>100_bases CGTTGCCATGATGATCCTCCTTTATATATGTGCGTGAGCGGCGTCATTGCAATGACTGCGCCAGTGTACAAGTGTCTGAA CGTCACCGTAACCTCAAAGC
Downstream 100 bases:
>100_bases TTTTTCATATATACTCCGGCTCCCCTCATTGAGGGGCTGAGCCGTAAAGAAAACAGTCCAGTGGACTGTTCTTAGGCGAA GTGGCGGCGATAGCCGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane Spanning Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTWNPFKKKEEAQVPVEQAPKKAADPSEKKGRPTPKMKQAQAAGIRPLVPVDRKASAKAAKARLRERENAEYEAMQKGDI NHMPKSERLPWRIYIRDYVDARFNLGEWFIPVSFGILIASMFAASLMRNQWASVTMMALMYGYLIAVIIDVWLMWRRLKP KLIAKYGESSVAKGSRSFSYAWSRSIQMRRWRLPKPRYPKRGHWPAD
Sequences:
>Translated_207_residues MTWNPFKKKEEAQVPVEQAPKKAADPSEKKGRPTPKMKQAQAAGIRPLVPVDRKASAKAAKARLRERENAEYEAMQKGDI NHMPKSERLPWRIYIRDYVDARFNLGEWFIPVSFGILIASMFAASLMRNQWASVTMMALMYGYLIAVIIDVWLMWRRLKP KLIAKYGESSVAKGSRSFSYAWSRSIQMRRWRLPKPRYPKRGHWPAD >Mature_206_residues TWNPFKKKEEAQVPVEQAPKKAADPSEKKGRPTPKMKQAQAAGIRPLVPVDRKASAKAAKARLRERENAEYEAMQKGDIN HMPKSERLPWRIYIRDYVDARFNLGEWFIPVSFGILIASMFAASLMRNQWASVTMMALMYGYLIAVIIDVWLMWRRLKPK LIAKYGESSVAKGSRSFSYAWSRSIQMRRWRLPKPRYPKRGHWPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24054; Mature: 23923
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWNPFKKKEEAQVPVEQAPKKAADPSEKKGRPTPKMKQAQAAGIRPLVPVDRKASAKAA CCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH KARLRERENAEYEAMQKGDINHMPKSERLPWRIYIRDYVDARFNLGEWFIPVSFGILIAS HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHH MFAASLMRNQWASVTMMALMYGYLIAVIIDVWLMWRRLKPKLIAKYGESSVAKGSRSFSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCHHH AWSRSIQMRRWRLPKPRYPKRGHWPAD HHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TWNPFKKKEEAQVPVEQAPKKAADPSEKKGRPTPKMKQAQAAGIRPLVPVDRKASAKAA CCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH KARLRERENAEYEAMQKGDINHMPKSERLPWRIYIRDYVDARFNLGEWFIPVSFGILIAS HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHH MFAASLMRNQWASVTMMALMYGYLIAVIIDVWLMWRRLKPKLIAKYGESSVAKGSRSFSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCHHH AWSRSIQMRRWRLPKPRYPKRGHWPAD HHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA