| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is argH [H]
Identifier: 213692740
GI number: 213692740
Start: 2042446
End: 2043918
Strand: Reverse
Name: argH [H]
Synonym: Blon_1874
Alternate gene names: 213692740
Gene position: 2043918-2042446 (Counterclockwise)
Preceding gene: 213692741
Following gene: 213692739
Centisome position: 72.15
GC content: 65.99
Gene sequence:
>1473_bases ATGACTGAGAACAACGAACATCTGGCCCTGTGGGGTGGTCGCTTTACGTCCGGTCCGTCGCCGGAATTGGCCCGACTGTC CAAGTCCACGCAGTTCGACTGGCGCTTGGCCGACGACGATATCGCCGGTTCCCGCGCCCACGCCCGTGCTCTCGGCCGTG CGGGACTTTTGACCGCCGACGAGCTGCAGCGCATGGAGGATGCGCTCGACACGCTCCAGCGTCATGTGGATGACGGCTCC TTCGCCCCCATCGAAGACGATGAGGACGAGGCCACCGCCCTCGAACGCGGTCTGATTGACATTGCCGGCGACGAACTCGG CGGCAAACTGCGTGCCGGACGCTCCCGCAACGACCAGATCGCCTGCCTGATTCGTATGTGGCTGCGCCGCCACTCCCGTG CGATTGCCGGACTCCTGCTTGACCTCGTCAACGCCCTGATCGAGCAGAGCGAAAAGGCCGGCCGCACCGTGATGCCGGGC CGCACCCACATGCAGCACGCCCAGCCCGTGCTGCTCGCGCACCAGCTCATGGCCCACGCTTGGCCGCTGATCCGCGACGT GCAGCGACTGATCGACTGGGACAAGCGCATCAACGCCTCCCCGTACGGCTCCGGCGCGCTGGCCGGCAACACGCTCGGCC TGGACCCGGAGGCCGTGGCGCGTGAGCTCGGCTTCTCCCGCGTGACCGACAACTCCATCGATGGCACCGCCGCACGTGAT CTCGTCGCCGAATTCGCGTTCGTGGCCGCCATGACCGGCGTGGACATCTCCCGCCTGTCCGAGGAGATCATCATCTGGAA CACCCAGGAGTTCGCCTTCGTCAAGCTCGACGACGGCTATTCCACCGGCTCCTCCATCATGCCGCAGAAGAAGAACCCGG ATATCGCCGAGCTCGCCCGCGGCAAGTCCGGCCGACTCATCGGCGATCTGACCGGTCTGCTGTCCACCCTGAAGGGCCTG CCCACCGCCTACGCTCGCGATCTGCAGGAAGACAAGGAGGCCGTGTTCGACCAGGTCGATACGCTCGAAGTGCTGCTGCC CGCCTTCACCGGCATGGTCAAGACCATGCACTTCGACGGCGACCGCCTGGAAGAGGAAGCTCCGACCGGCTTCGCGCTGG CCACCGACATCGCCGAATGGCTCGTCAAGAACGGTGTGCCGTTCCGCCACGCGCACGAGCTCTCTGGTGCCTGCGTCAAG CTCGCCGAAGGCCGCGGCCAGGAACTGTGGGATCTGACCGACAATGACTTCATCGAGACCTTCGCCGCGTTCCTGCCGGC CGACAAGGCTCCGGGAGTACGCGAAGTGCTCTCCAGCCACGGTTCGGTCGACTCCCGCAACGGCAAGGGCGGCACCGCTT ACGGTCGCGTGCGCGAGCAGATCGCCGACGCCAAGGCCGAGGTCGAAGAACTCAAGCTCTTCCCCGCATCCACGTCGGAT GGCTCCGCCTACAAAGCCCCCGGCACGTTCTAG
Upstream 100 bases:
>100_bases GTCACACTCCATGTGACAGCCCTCGCCAGCGGGGGCAACTGTATGTTTGAACACATTGCTACGCTTAAACACAGCTATTT TCACTTTTCAAGGAGCCTTC
Downstream 100 bases:
>100_bases TCCCAATAGAGCTCCCTCGTCAGAGGGAGCTCTATTTTGCTGTTGTCACTGCAACGGCATACACTGAGAAATCGTAACGA ACGGGAGCCGTGAGGCTGAG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTENNEHLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTADELQRMEDALDTLQRHVDDGS FAPIEDDEDEATALERGLIDIAGDELGGKLRAGRSRNDQIACLIRMWLRRHSRAIAGLLLDLVNALIEQSEKAGRTVMPG RTHMQHAQPVLLAHQLMAHAWPLIRDVQRLIDWDKRINASPYGSGALAGNTLGLDPEAVARELGFSRVTDNSIDGTAARD LVAEFAFVAAMTGVDISRLSEEIIIWNTQEFAFVKLDDGYSTGSSIMPQKKNPDIAELARGKSGRLIGDLTGLLSTLKGL PTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVKTMHFDGDRLEEEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVK LAEGRGQELWDLTDNDFIETFAAFLPADKAPGVREVLSSHGSVDSRNGKGGTAYGRVREQIADAKAEVEELKLFPASTSD GSAYKAPGTF
Sequences:
>Translated_490_residues MTENNEHLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTADELQRMEDALDTLQRHVDDGS FAPIEDDEDEATALERGLIDIAGDELGGKLRAGRSRNDQIACLIRMWLRRHSRAIAGLLLDLVNALIEQSEKAGRTVMPG RTHMQHAQPVLLAHQLMAHAWPLIRDVQRLIDWDKRINASPYGSGALAGNTLGLDPEAVARELGFSRVTDNSIDGTAARD LVAEFAFVAAMTGVDISRLSEEIIIWNTQEFAFVKLDDGYSTGSSIMPQKKNPDIAELARGKSGRLIGDLTGLLSTLKGL PTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVKTMHFDGDRLEEEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVK LAEGRGQELWDLTDNDFIETFAAFLPADKAPGVREVLSSHGSVDSRNGKGGTAYGRVREQIADAKAEVEELKLFPASTSD GSAYKAPGTF >Mature_489_residues TENNEHLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTADELQRMEDALDTLQRHVDDGSF APIEDDEDEATALERGLIDIAGDELGGKLRAGRSRNDQIACLIRMWLRRHSRAIAGLLLDLVNALIEQSEKAGRTVMPGR THMQHAQPVLLAHQLMAHAWPLIRDVQRLIDWDKRINASPYGSGALAGNTLGLDPEAVARELGFSRVTDNSIDGTAARDL VAEFAFVAAMTGVDISRLSEEIIIWNTQEFAFVKLDDGYSTGSSIMPQKKNPDIAELARGKSGRLIGDLTGLLSTLKGLP TAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVKTMHFDGDRLEEEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKL AEGRGQELWDLTDNDFIETFAAFLPADKAPGVREVLSSHGSVDSRNGKGGTAYGRVREQIADAKAEVEELKLFPASTSDG SAYKAPGTF
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=460, Percent_Identity=42.6086956521739, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI68303542, Length=460, Percent_Identity=42.6086956521739, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI68303547, Length=457, Percent_Identity=40.0437636761488, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI68303549, Length=460, Percent_Identity=40.2173913043478, Blast_Score=325, Evalue=8e-89, Organism=Escherichia coli, GI1790398, Length=462, Percent_Identity=42.2077922077922, Blast_Score=328, Evalue=3e-91, Organism=Saccharomyces cerevisiae, GI6321806, Length=462, Percent_Identity=39.6103896103896, Blast_Score=322, Evalue=6e-89, Organism=Drosophila melanogaster, GI221473854, Length=452, Percent_Identity=41.8141592920354, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI78706858, Length=452, Percent_Identity=41.8141592920354, Blast_Score=342, Evalue=3e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 53352; Mature: 53221
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENNEHLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTAD CCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHH ELQRMEDALDTLQRHVDDGSFAPIEDDEDEATALERGLIDIAGDELGGKLRAGRSRNDQI HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHCCCCHHCCCHHCCCCCCCHH ACLIRMWLRRHSRAIAGLLLDLVNALIEQSEKAGRTVMPGRTHMQHAQPVLLAHQLMAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH WPLIRDVQRLIDWDKRINASPYGSGALAGNTLGLDPEAVARELGFSRVTDNSIDGTAARD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHH LVAEFAFVAAMTGVDISRLSEEIIIWNTQEFAFVKLDDGYSTGSSIMPQKKNPDIAELAR HHHHHHHHHHHHCCCHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHC GKSGRLIGDLTGLLSTLKGLPTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVKTMHFDG CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRLEEEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKLAEGRGQELWDLTDNDFIET HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHH FAAFLPADKAPGVREVLSSHGSVDSRNGKGGTAYGRVREQIADAKAEVEELKLFPASTSD HHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC GSAYKAPGTF CCCCCCCCCC >Mature Secondary Structure TENNEHLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTAD CCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHH ELQRMEDALDTLQRHVDDGSFAPIEDDEDEATALERGLIDIAGDELGGKLRAGRSRNDQI HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHCCCCHHCCCHHCCCCCCCHH ACLIRMWLRRHSRAIAGLLLDLVNALIEQSEKAGRTVMPGRTHMQHAQPVLLAHQLMAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH WPLIRDVQRLIDWDKRINASPYGSGALAGNTLGLDPEAVARELGFSRVTDNSIDGTAARD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHH LVAEFAFVAAMTGVDISRLSEEIIIWNTQEFAFVKLDDGYSTGSSIMPQKKNPDIAELAR HHHHHHHHHHHHCCCHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHC GKSGRLIGDLTGLLSTLKGLPTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVKTMHFDG CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRLEEEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKLAEGRGQELWDLTDNDFIET HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHH FAAFLPADKAPGVREVLSSHGSVDSRNGKGGTAYGRVREQIADAKAEVEELKLFPASTSD HHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC GSAYKAPGTF CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA