| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692735
Identifier: 213692735
GI number: 213692735
Start: 2039032
End: 2039565
Strand: Reverse
Name: 213692735
Synonym: Blon_1869
Alternate gene names: NA
Gene position: 2039565-2039032 (Counterclockwise)
Preceding gene: 213692736
Following gene: 213692733
Centisome position: 72.0
GC content: 61.42
Gene sequence:
>534_bases GTGGGACATCTGCTCACCCGAACGCAGATTCAACGCCTGGTCGCCAAGCACGGCCGTGAGGTCATCGAGCATCGCCACAT GCAGATCGAACGCTGCTACTACCAGCACGGCAACGTCACCACGTTCGAACATTCCGTGCGTGTCGCCTGCCTGGCTGTGT GGATGGCCGACCGCGCGCACCTGTGGTACCGCGTCGACCTCAAATCCCTGATTCGCGCGGCCCTCCTGCACGATTACTTC CTGTACGACTGGCACGACTGGGATAACGGCGAACACCAGTGGCATGGCTTCACCCATGGCCACGCCGCCCTGGTCAATGC CCTGAAGGACTTCAAGCTCAACGATATCGAACGCAACAGCATCGAGAACCACATGTTCCCGATGACCCTGGTGCCGCCGC GCTATATCGAAGGCTATCTGGTCACCTTGGCGGACAAATGCTCCGCCACCGCCGAGACCTTCTCGCTCGACCGGTTCAAC AAGCGCGCGTTGCCCGCCGCGAAGCCCTACGCCGAGATCGAAGCCCGTCGATGA
Upstream 100 bases:
>100_bases TCGGTCACGGTATTACTCGATGGATTCTTGAATATCGTCGGGTAATCGTAATTCACAACAAGGGATTGCACTGAACCAAC CCGAACGGAGGGTCGAAACC
Downstream 100 bases:
>100_bases TCATCACACTCGAACATTATTTCCTCTGGTTTCTGTTCTACAGTTTCGTCGGCTGGATGTACGAATCCATTCTCGTCTCC TGCCAACAGCACCGCTTGGT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; HD Family Hydrolase; Hydrolase; Phosphohydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; Domain HDIG Containing Protein; HD Domain Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MGHLLTRTQIQRLVAKHGREVIEHRHMQIERCYYQHGNVTTFEHSVRVACLAVWMADRAHLWYRVDLKSLIRAALLHDYF LYDWHDWDNGEHQWHGFTHGHAALVNALKDFKLNDIERNSIENHMFPMTLVPPRYIEGYLVTLADKCSATAETFSLDRFN KRALPAAKPYAEIEARR
Sequences:
>Translated_177_residues MGHLLTRTQIQRLVAKHGREVIEHRHMQIERCYYQHGNVTTFEHSVRVACLAVWMADRAHLWYRVDLKSLIRAALLHDYF LYDWHDWDNGEHQWHGFTHGHAALVNALKDFKLNDIERNSIENHMFPMTLVPPRYIEGYLVTLADKCSATAETFSLDRFN KRALPAAKPYAEIEARR >Mature_176_residues GHLLTRTQIQRLVAKHGREVIEHRHMQIERCYYQHGNVTTFEHSVRVACLAVWMADRAHLWYRVDLKSLIRAALLHDYFL YDWHDWDNGEHQWHGFTHGHAALVNALKDFKLNDIERNSIENHMFPMTLVPPRYIEGYLVTLADKCSATAETFSLDRFNK RALPAAKPYAEIEARR
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20864; Mature: 20733
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHLLTRTQIQRLVAKHGREVIEHRHMQIERCYYQHGNVTTFEHSVRVACLAVWMADRAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCE LWYRVDLKSLIRAALLHDYFLYDWHDWDNGEHQWHGFTHGHAALVNALKDFKLNDIERNS EEEEECHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHC IENHMFPMTLVPPRYIEGYLVTLADKCSATAETFSLDRFNKRALPAAKPYAEIEARR HHHCCCCEEECCHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure GHLLTRTQIQRLVAKHGREVIEHRHMQIERCYYQHGNVTTFEHSVRVACLAVWMADRAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCE LWYRVDLKSLIRAALLHDYFLYDWHDWDNGEHQWHGFTHGHAALVNALKDFKLNDIERNS EEEEECHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHC IENHMFPMTLVPPRYIEGYLVTLADKCSATAETFSLDRFNKRALPAAKPYAEIEARR HHHCCCCEEECCHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA