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The map label for this gene is nagD [H]

Identifier: 213692731

GI number: 213692731

Start: 2034130

End: 2035170

Strand: Reverse

Name: nagD [H]

Synonym: Blon_1865

Alternate gene names: 213692731

Gene position: 2035170-2034130 (Counterclockwise)

Preceding gene: 213692732

Following gene: 213692730

Centisome position: 71.84

GC content: 65.03

Gene sequence:

>1041_bases
ATGACCCGTTTCCTCAAAGGCACCGATCGCCCGCTCGCCGAGGCCTATCAGCTTGCGCTGCTGGACCTCGACGGCGTGGT
GTATCGCGGCAAGAATCCGGTCGAATACGCGGCCGATTCCATTCGTGCGGCCGAAGCCGCCGGCATGACCATCGAATACA
CCACGAACAACTCCTCGCGCTTCCAGCACGTGGTGGCCGACCAGCTCAAGGGCTTCGGCTTGGACGTGGAGCCGTGGCAG
GTCATCACCTCTTCGGTGGTGGCCGCCCGTGTGGTGGCCAAGGCGTTGCCCGCCGGCGCGCGCGTACAGGTATTGGGCGC
CGAGCATTTGCGCGATGAGGTCACCCGCAACGGCCTGACCATCGTGGACGGTCCTCAGGACCGCCCACAGGCCGTCATTC
AGGGCTGGTATCCGGATATGACCTGGCAGATGATGGCCGACGCCGCGTTCGCGGTCGAGGCCGGAGCCACGTATTTCGTG
ACCAACCGCGACCTGACGATTCCTCGTGAACTGGGCATCGCCCCCGGTTGCGGATCGATGATTCGCGCCGTGATCACGGC
CACTGGCGTCGAACCGGTCGCCTCCGCTGGCAAGCCGGAAGCGTACATGTACGATGAGGCCCGCGAACTGAACGCCGCCG
AAGGCCACGATCTGGTGCCCAAGGAGGCGTCCATCGCCATTGGCGACCGCCTCGACACCGATATCGAGGCCGGTAACCGC
GGTGACTACGATTCGCTGGCGGTGCTGACCGGTGTCACCAACCCGACCGAACTGATGCTGGCTCCGGCACACCTGAGGCC
CACATTCATCGCCCTTGATTTGCGTGAACTCGGCGAAGCCCAACCGGAGCCGGTCCGCGACGAGAGCGGTACTTGGGAAT
GCCGCAAGGCTAGCGCTTGGTTTGAAAACGGCCAGGTACACGTCAGCGACCCCACCAGTATGGACGGCCTGCGCGCCGCC
GTATGCGCCGCATGGGAAGCCGCCGACCAAGGCGCACAGCTCAGCGAGGCCACGGTACCTGTGTTCGCCGTCGAGGCATA
G

Upstream 100 bases:

>100_bases
AGACCGATTCCGCCGATGACGCCGAGGCTGACGATTCCGCCGAAGCCGCCGGTTCCGACTCCACCGAACCCGGAACCGAA
ACCGAGGAGTGAGCGGCGTA

Downstream 100 bases:

>100_bases
TCCTATGCCTACGGATAGCGAACACGCGACGGTCACCGAGCGATACCCCGAACTTGCGGATATCGATGAACAAGACAATG
ACCGCAAGCTTGAGACCTAT

Product: HAD-superfamily hydrolase, subfamily IIA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTRFLKGTDRPLAEAYQLALLDLDGVVYRGKNPVEYAADSIRAAEAAGMTIEYTTNNSSRFQHVVADQLKGFGLDVEPWQ
VITSSVVAARVVAKALPAGARVQVLGAEHLRDEVTRNGLTIVDGPQDRPQAVIQGWYPDMTWQMMADAAFAVEAGATYFV
TNRDLTIPRELGIAPGCGSMIRAVITATGVEPVASAGKPEAYMYDEARELNAAEGHDLVPKEASIAIGDRLDTDIEAGNR
GDYDSLAVLTGVTNPTELMLAPAHLRPTFIALDLRELGEAQPEPVRDESGTWECRKASAWFENGQVHVSDPTSMDGLRAA
VCAAWEAADQGAQLSEATVPVFAVEA

Sequences:

>Translated_346_residues
MTRFLKGTDRPLAEAYQLALLDLDGVVYRGKNPVEYAADSIRAAEAAGMTIEYTTNNSSRFQHVVADQLKGFGLDVEPWQ
VITSSVVAARVVAKALPAGARVQVLGAEHLRDEVTRNGLTIVDGPQDRPQAVIQGWYPDMTWQMMADAAFAVEAGATYFV
TNRDLTIPRELGIAPGCGSMIRAVITATGVEPVASAGKPEAYMYDEARELNAAEGHDLVPKEASIAIGDRLDTDIEAGNR
GDYDSLAVLTGVTNPTELMLAPAHLRPTFIALDLRELGEAQPEPVRDESGTWECRKASAWFENGQVHVSDPTSMDGLRAA
VCAAWEAADQGAQLSEATVPVFAVEA
>Mature_345_residues
TRFLKGTDRPLAEAYQLALLDLDGVVYRGKNPVEYAADSIRAAEAAGMTIEYTTNNSSRFQHVVADQLKGFGLDVEPWQV
ITSSVVAARVVAKALPAGARVQVLGAEHLRDEVTRNGLTIVDGPQDRPQAVIQGWYPDMTWQMMADAAFAVEAGATYFVT
NRDLTIPRELGIAPGCGSMIRAVITATGVEPVASAGKPEAYMYDEARELNAAEGHDLVPKEASIAIGDRLDTDIEAGNRG
DYDSLAVLTGVTNPTELMLAPAHLRPTFIALDLRELGEAQPEPVRDESGTWECRKASAWFENGQVHVSDPTSMDGLRAAV
CAAWEAADQGAQLSEATVPVFAVEA

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. NagD family [H]

Homologues:

Organism=Homo sapiens, GI10092677, Length=255, Percent_Identity=31.3725490196078, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI108796653, Length=264, Percent_Identity=27.6515151515151, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786890, Length=258, Percent_Identity=28.2945736434109, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319965, Length=260, Percent_Identity=25, Blast_Score=80, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR006354
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 37142; Mature: 37011

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFLKGTDRPLAEAYQLALLDLDGVVYRGKNPVEYAADSIRAAEAAGMTIEYTTNNSSR
CCCCCCCCCCHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHH
FQHVVADQLKGFGLDVEPWQVITSSVVAARVVAKALPAGARVQVLGAEHLRDEVTRNGLT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCE
IVDGPQDRPQAVIQGWYPDMTWQMMADAAFAVEAGATYFVTNRDLTIPRELGIAPGCGSM
EEECCCCCCHHHHCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHCCCCCHHHH
IRAVITATGVEPVASAGKPEAYMYDEARELNAAEGHDLVPKEASIAIGDRLDTDIEAGNR
HHHHHHHCCCCHHHCCCCCCEEECCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
GDYDSLAVLTGVTNPTELMLAPAHLRPTFIALDLRELGEAQPEPVRDESGTWECRKASAW
CCCCCEEEEECCCCCHHEEEECCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEECCHH
FENGQVHVSDPTSMDGLRAAVCAAWEAADQGAQLSEATVPVFAVEA
HCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TRFLKGTDRPLAEAYQLALLDLDGVVYRGKNPVEYAADSIRAAEAAGMTIEYTTNNSSR
CCCCCCCCCHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHH
FQHVVADQLKGFGLDVEPWQVITSSVVAARVVAKALPAGARVQVLGAEHLRDEVTRNGLT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCE
IVDGPQDRPQAVIQGWYPDMTWQMMADAAFAVEAGATYFVTNRDLTIPRELGIAPGCGSM
EEECCCCCCHHHHCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHCCCCCHHHH
IRAVITATGVEPVASAGKPEAYMYDEARELNAAEGHDLVPKEASIAIGDRLDTDIEAGNR
HHHHHHHCCCCHHHCCCCCCEEECCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
GDYDSLAVLTGVTNPTELMLAPAHLRPTFIALDLRELGEAQPEPVRDESGTWECRKASAW
CCCCCEEEEECCCCCHHEEEECCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEECCHH
FENGQVHVSDPTSMDGLRAAVCAAWEAADQGAQLSEATVPVFAVEA
HCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA