Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yccK [H]

Identifier: 213692704

GI number: 213692704

Start: 1999934

End: 2000872

Strand: Reverse

Name: yccK [H]

Synonym: Blon_1837

Alternate gene names: 213692704

Gene position: 2000872-1999934 (Counterclockwise)

Preceding gene: 213692705

Following gene: 213692703

Centisome position: 70.63

GC content: 59.74

Gene sequence:

>939_bases
ATGAGCGAAACGACTACGAACCGTACGAACCAGAGCGCGACCACGGCAACACTTGCCGGCTATGAGATTCCCCGCCTCGG
CATGGGCACGATGGCGCTCGCCATCGAGGGGCGCCCCTCTAACCGTGATCAGGCAATCGAGACCATCCATGCCGCGCTCG
ATGCCGGAGTCCGTTATTTGGACACGGCTTGGTCCTATTATCTGCCCAGCGCGCCCGGCACCGGCGAACCGGAGGATATG
GGCTATGGCGAATATCTGGTCCGTGATGCTCTGCACTCGTGGCATGGCCCCAAAGATCAGGTGCTCGTGGCCACCAAAAC
CGGCTGGCTGCGTACGCTTGACGGCAACGGCAACTACGGCTGGCAGGCCGACGCCCGACCTGAAACCATGATCGCCAATG
CCAAGGAATCAGCCCGCCGCCTCGGTGTCGATACGCTCGATCTGCTCTACTCGCACTGCAACGATCCGCAGGTGCCGTAC
GAAGACCAGATGGGCGCACTCAAGCAGCTCGTGGACGAAGGTGTGGCCAAAGCGGTCGGTATCTCCAGAATCGACAACAC
AGACATCGAAACCGCCCACAACATTTTGGGCGATCGTCTCGTGGCCGTCCAGAACCAGTTCTCCCCGGTCCACCGCGACC
CCGAACACACGTTGGAAACCTGCGAAAAACTCGGTTTGGCTTTCGTCTGCTGGTCGCCGCTCGGGGGATTCCTTGACCCG
TTCAACGGGCATCTGTTCGACCGGTTCCGCGAAGTCGCGAAGTCCCACGACTGCTCCTACCAGCGCGTCACGCTCGCGTG
GGAACTTGCGCAATACCAATATCTGTTCACGATTCCCTCGGCCAGAAACCCGCAGGAGATTCAGGACTCGTTCAAAGCCG
GCGAACTGAAATTGTCCGACAGTGAAATCGACTACCTCAATGGCAAGGACATCGACTGA

Upstream 100 bases:

>100_bases
CGGTGAGCCATATTCATATTTTCGGGCCGTCGTTTGTGACGATGATTCGCTACAGACGGAATCGTTCCGGCTGTCCAGCG
AGCGGGATTAAGTGACTGCT

Downstream 100 bases:

>100_bases
GCGATTTCGTCCGTACTGCCTTGCAATCAGGCGGCACACTGGCATTGTGAGCGCTAACACTAAATTTTGGGCGTGTTGTT
CACAACGTCCACAAATCGCA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDM
GYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPY
EDQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP
FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID

Sequences:

>Translated_312_residues
MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDM
GYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPY
EDQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP
FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID
>Mature_311_residues
SETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDMG
YGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYE
DQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDPF
NGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=306, Percent_Identity=27.7777777777778, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788070, Length=319, Percent_Identity=24.4514106583072, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788081, Length=288, Percent_Identity=25, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=22.884012539185, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34657; Mature: 34526

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYL
CCCCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DTAWSYYLPSAPGTGEPEDMGYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCC
WQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYEDQMGALKQLVDEGVAKAVG
CCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSD
CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHEEEEEECCCCCCHHHHHHHHCCCCEEECC
SEIDYLNGKDID
CCCCCCCCCCCC
>Mature Secondary Structure 
SETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYL
CCCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DTAWSYYLPSAPGTGEPEDMGYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCC
WQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYEDQMGALKQLVDEGVAKAVG
CCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSD
CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHEEEEEECCCCCCHHHHHHHHCCCCEEECC
SEIDYLNGKDID
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377; 9106203 [H]