| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yccK [H]
Identifier: 213692704
GI number: 213692704
Start: 1999934
End: 2000872
Strand: Reverse
Name: yccK [H]
Synonym: Blon_1837
Alternate gene names: 213692704
Gene position: 2000872-1999934 (Counterclockwise)
Preceding gene: 213692705
Following gene: 213692703
Centisome position: 70.63
GC content: 59.74
Gene sequence:
>939_bases ATGAGCGAAACGACTACGAACCGTACGAACCAGAGCGCGACCACGGCAACACTTGCCGGCTATGAGATTCCCCGCCTCGG CATGGGCACGATGGCGCTCGCCATCGAGGGGCGCCCCTCTAACCGTGATCAGGCAATCGAGACCATCCATGCCGCGCTCG ATGCCGGAGTCCGTTATTTGGACACGGCTTGGTCCTATTATCTGCCCAGCGCGCCCGGCACCGGCGAACCGGAGGATATG GGCTATGGCGAATATCTGGTCCGTGATGCTCTGCACTCGTGGCATGGCCCCAAAGATCAGGTGCTCGTGGCCACCAAAAC CGGCTGGCTGCGTACGCTTGACGGCAACGGCAACTACGGCTGGCAGGCCGACGCCCGACCTGAAACCATGATCGCCAATG CCAAGGAATCAGCCCGCCGCCTCGGTGTCGATACGCTCGATCTGCTCTACTCGCACTGCAACGATCCGCAGGTGCCGTAC GAAGACCAGATGGGCGCACTCAAGCAGCTCGTGGACGAAGGTGTGGCCAAAGCGGTCGGTATCTCCAGAATCGACAACAC AGACATCGAAACCGCCCACAACATTTTGGGCGATCGTCTCGTGGCCGTCCAGAACCAGTTCTCCCCGGTCCACCGCGACC CCGAACACACGTTGGAAACCTGCGAAAAACTCGGTTTGGCTTTCGTCTGCTGGTCGCCGCTCGGGGGATTCCTTGACCCG TTCAACGGGCATCTGTTCGACCGGTTCCGCGAAGTCGCGAAGTCCCACGACTGCTCCTACCAGCGCGTCACGCTCGCGTG GGAACTTGCGCAATACCAATATCTGTTCACGATTCCCTCGGCCAGAAACCCGCAGGAGATTCAGGACTCGTTCAAAGCCG GCGAACTGAAATTGTCCGACAGTGAAATCGACTACCTCAATGGCAAGGACATCGACTGA
Upstream 100 bases:
>100_bases CGGTGAGCCATATTCATATTTTCGGGCCGTCGTTTGTGACGATGATTCGCTACAGACGGAATCGTTCCGGCTGTCCAGCG AGCGGGATTAAGTGACTGCT
Downstream 100 bases:
>100_bases GCGATTTCGTCCGTACTGCCTTGCAATCAGGCGGCACACTGGCATTGTGAGCGCTAACACTAAATTTTGGGCGTGTTGTT CACAACGTCCACAAATCGCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDM GYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPY EDQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID
Sequences:
>Translated_312_residues MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDM GYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPY EDQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID >Mature_311_residues SETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYLDTAWSYYLPSAPGTGEPEDMG YGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYGWQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYE DQMGALKQLVDEGVAKAVGISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDPF NGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSDSEIDYLNGKDID
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787674, Length=306, Percent_Identity=27.7777777777778, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1788070, Length=319, Percent_Identity=24.4514106583072, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788081, Length=288, Percent_Identity=25, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=22.884012539185, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34657; Mature: 34526
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYL CCCCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH DTAWSYYLPSAPGTGEPEDMGYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYG HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCC WQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYEDQMGALKQLVDEGVAKAVG CCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSD CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHEEEEEECCCCCCHHHHHHHHCCCCEEECC SEIDYLNGKDID CCCCCCCCCCCC >Mature Secondary Structure SETTTNRTNQSATTATLAGYEIPRLGMGTMALAIEGRPSNRDQAIETIHAALDAGVRYL CCCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH DTAWSYYLPSAPGTGEPEDMGYGEYLVRDALHSWHGPKDQVLVATKTGWLRTLDGNGNYG HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCC WQADARPETMIANAKESARRLGVDTLDLLYSHCNDPQVPYEDQMGALKQLVDEGVAKAVG CCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISRIDNTDIETAHNILGDRLVAVQNQFSPVHRDPEHTLETCEKLGLAFVCWSPLGGFLDP HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC FNGHLFDRFREVAKSHDCSYQRVTLAWELAQYQYLFTIPSARNPQEIQDSFKAGELKLSD CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHEEEEEECCCCCCHHHHHHHHCCCCEEECC SEIDYLNGKDID CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]