| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692691
Identifier: 213692691
GI number: 213692691
Start: 1986116
End: 1987093
Strand: Direct
Name: 213692691
Synonym: Blon_1824
Alternate gene names: NA
Gene position: 1986116-1987093 (Clockwise)
Preceding gene: 213692690
Following gene: 213692692
Centisome position: 70.11
GC content: 67.48
Gene sequence:
>978_bases ATGGCCGGTGTCGGCTACGCGTTGAACGGCGTCGCCCTGGATTCGCGGTACTGCCGGGTCACGCTCGGCAGCACCCTGTT CGCCGGCGTCTCCGTATCCCGCAGCAAGGTGTCCGCGCCGTTCCGGCATGGCACGATCCCCTCGGGGGTGACGCCGACGT TCGGAGAACGGTCGGCGACCCTCAAGGTGGCCGCGTTCGGGGCGGGCGCGATCGGCCATGACACGGGGCATGGCATGGAT TCGAGCCGTCTGGCCCGCCTGTGCACGACGCCGTATCCGGTCCTGTCGCGCACCGTCAACGGTCAACTCCAGCAGGCGGT CGTGGAGCTCGCCAGCCTCGAGGCGGACGACGGGGGCACCGTGTTGGACAGGCTCACTCCGTTCACGGCGGTGTTCGCCA TGCCTCAGGTGTGGTGGCGAGACCCGGTCGCGTATGACCGTCCGGTCGCGGCGAATGGCACGGCGTTCCTGTGGCCCGCC GCATGCCGGTGGGCGCAGCCTTATTGGACGCGGTGGGAGGTCGAGCCGAACAACAGCACGTCGCTGCTGGCGGATTTCGT GACCATGTGGATTGGTGAGCCGAACAATTCGCCGTCGCTGCTGATCCCGTTGTCGTCGGGCATACCGGATGGCATGTTCG GTGACGCGCCCGTCACCGATCCGATAATACGGCTGCCCAAGGGCGTGAGCAGCGCCTCGGTCACCGACCCCACGTCGAAC ACGGGCGTCATCTGGCAGGGTGCGGCCAACGCGAACGCCTACACGTATGTGGACGTGGGCAACTGCCTCGCATGGCAGTC CACGGCGGATCATCAGTGGACGCAATCTGGCACGGACGTGACCGGCGGCTTGGATTATCCGGCGGGCGGCCTGCTGCAAT GCTGGCCGAACCCGGTGGACAACGGCTACCGGCTCACGTCGAAGATCACCGGCAGCGGCGAGCCATTGCTCGTGCACGTG CGCCGCGCATGGTGGTAG
Upstream 100 bases:
>100_bases TGCATATCACGAACTACTATCCGCAGGCCGACCCGTGGCCCCTGTCCACGAACGACAGTCTCGACAAAATGACCGTAGGC ATCTGAATGAGGAGGCGTAT
Downstream 100 bases:
>100_bases ACCCCGTATTCCCCTTCTATGCAATTTCCGCGCCGGTTTTCAACGTCTGGAGTCCCCTTATGGTCAAGACACTGCACGCC CGCCTCGTCGCCTACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MAGVGYALNGVALDSRYCRVTLGSTLFAGVSVSRSKVSAPFRHGTIPSGVTPTFGERSATLKVAAFGAGAIGHDTGHGMD SSRLARLCTTPYPVLSRTVNGQLQQAVVELASLEADDGGTVLDRLTPFTAVFAMPQVWWRDPVAYDRPVAANGTAFLWPA ACRWAQPYWTRWEVEPNNSTSLLADFVTMWIGEPNNSPSLLIPLSSGIPDGMFGDAPVTDPIIRLPKGVSSASVTDPTSN TGVIWQGAANANAYTYVDVGNCLAWQSTADHQWTQSGTDVTGGLDYPAGGLLQCWPNPVDNGYRLTSKITGSGEPLLVHV RRAWW
Sequences:
>Translated_325_residues MAGVGYALNGVALDSRYCRVTLGSTLFAGVSVSRSKVSAPFRHGTIPSGVTPTFGERSATLKVAAFGAGAIGHDTGHGMD SSRLARLCTTPYPVLSRTVNGQLQQAVVELASLEADDGGTVLDRLTPFTAVFAMPQVWWRDPVAYDRPVAANGTAFLWPA ACRWAQPYWTRWEVEPNNSTSLLADFVTMWIGEPNNSPSLLIPLSSGIPDGMFGDAPVTDPIIRLPKGVSSASVTDPTSN TGVIWQGAANANAYTYVDVGNCLAWQSTADHQWTQSGTDVTGGLDYPAGGLLQCWPNPVDNGYRLTSKITGSGEPLLVHV RRAWW >Mature_324_residues AGVGYALNGVALDSRYCRVTLGSTLFAGVSVSRSKVSAPFRHGTIPSGVTPTFGERSATLKVAAFGAGAIGHDTGHGMDS SRLARLCTTPYPVLSRTVNGQLQQAVVELASLEADDGGTVLDRLTPFTAVFAMPQVWWRDPVAYDRPVAANGTAFLWPAA CRWAQPYWTRWEVEPNNSTSLLADFVTMWIGEPNNSPSLLIPLSSGIPDGMFGDAPVTDPIIRLPKGVSSASVTDPTSNT GVIWQGAANANAYTYVDVGNCLAWQSTADHQWTQSGTDVTGGLDYPAGGLLQCWPNPVDNGYRLTSKITGSGEPLLVHVR RAWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34671; Mature: 34540
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVGYALNGVALDSRYCRVTLGSTLFAGVSVSRSKVSAPFRHGTIPSGVTPTFGERSAT CCCCCEEECCEEECCCEEEEEECCCEECCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCE LKVAAFGAGAIGHDTGHGMDSSRLARLCTTPYPVLSRTVNGQLQQAVVELASLEADDGGT EEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCH VLDRLTPFTAVFAMPQVWWRDPVAYDRPVAANGTAFLWPAACRWAQPYWTRWEVEPNNST HHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEECHHHHCCCCCCCEEEEECCCCCH SLLADFVTMWIGEPNNSPSLLIPLSSGIPDGMFGDAPVTDPIIRLPKGVSSASVTDPTSN HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TGVIWQGAANANAYTYVDVGNCLAWQSTADHQWTQSGTDVTGGLDYPAGGLLQCWPNPVD CCEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCC NGYRLTSKITGSGEPLLVHVRRAWW CCEEEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure AGVGYALNGVALDSRYCRVTLGSTLFAGVSVSRSKVSAPFRHGTIPSGVTPTFGERSAT CCCCEEECCEEECCCEEEEEECCCEECCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCE LKVAAFGAGAIGHDTGHGMDSSRLARLCTTPYPVLSRTVNGQLQQAVVELASLEADDGGT EEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCH VLDRLTPFTAVFAMPQVWWRDPVAYDRPVAANGTAFLWPAACRWAQPYWTRWEVEPNNST HHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEECHHHHCCCCCCCEEEEECCCCCH SLLADFVTMWIGEPNNSPSLLIPLSSGIPDGMFGDAPVTDPIIRLPKGVSSASVTDPTSN HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TGVIWQGAANANAYTYVDVGNCLAWQSTADHQWTQSGTDVTGGLDYPAGGLLQCWPNPVD CCEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCC NGYRLTSKITGSGEPLLVHVRRAWW CCEEEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA