| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692690
Identifier: 213692690
GI number: 213692690
Start: 1983891
End: 1986101
Strand: Direct
Name: 213692690
Synonym: Blon_1823
Alternate gene names: NA
Gene position: 1983891-1986101 (Clockwise)
Preceding gene: 213692689
Following gene: 213692691
Centisome position: 70.03
GC content: 62.46
Gene sequence:
>2211_bases ATGGCCTACCAGCTCGCCCAGGCATACGTGCAGATCGTGCCCAGCATGAAGGGCGTGGGCAAGGCTATCGAAAGCGCGTT TGCCGGTCCATCCAAATCGGTCGGCCAGAAAGCCGGAGACACCGCCGGCGGCGGCTTCTCCAGGGGATTCTCCGCGAAGC TCGGCATGATCAGCGGCATCGCCCAAAGCGTGGCCGGCACCGTCATCCAAGGCTTCGCCGGCCTGTCCAGCCAGATCGTC GAAGCCTCCGACTCCACCCAGAAATTCGCCAGCACCCTAGGCTTCGCCGGAGTCTCCGACGCCGAGATCAGGAAACTAAC CAAATCGACGCAGGACTACGCCGACAAGACCGTGTTCGGACTCTCCGACATCCGCAACACCACCGCCCAGCTCGCGGCCA ACGGCGTACCCAACTACGACAAGTTGGCCGAGGCGGCGGGCAACCTCACCGCCGTGGCAGGCGGCGGGGCCGACGCATTC AAGAGCGTGGCCATGGTGCTCACGCAAACCGCAGGGGCCGGCAAGCTTACCACGGAAAACTGGAACCAGCTCTCCGACGC CATCCCCGGCGCTTCCGGCAAACTCCAGCAGGCCATGCTCCAAAACGGCGCATACACCGGCAACTTCCGCGACGCGATGG CCAATGGAGAGATCACAGCCGACGAATTCAATCAGGCGCTCATGCAGCTCGGCATGAGCGACACCGCCATACAGGCCGCC ACCAGCGCCAGCACCATGGAAGGCGCGATGGGCAACCTCGAAGCAAGCGCCGTCAAACTCGGCAGCACCATGCTCGACAG CGTCAAACCAGCGCTCACCGGATTCATCGGCTGGGCGTCCGACGGCATCAGCGCCGCAACGCCGGTCATCCAAGCCGGAA TCCAAGGCGTCATCGGATGGATGCAGGACCTATGGAAGGCGCTCAACGACAACGGCGCAGTCACCGCGTTCAAGTCCGCT TGGAACGCGATCAGGAACGCCATCATGGGCGTCGTCAACATGGTCATCGACTGGAGCAAACTCGCCCCTCCCGACACCCT CGCCAACGCCATCAAACTCGTCGCCGACGCCCTGAACTGGTTCGTGCAGCATGGCAACACGCTCATACCCATCATCATCG GCATCGGCACCGCGTTCGCGGCGGTCAAAGGCTATCAGGCCCTCAACAACGGGCTCACCGCGCTGACCAACACCATGAAC ACCGTCACGACCGCCGCTCAGGGCGTCAGCAAAGGCGTCATGCTCATGATGGACATGGGAGGCCCCATCGCCGCCATCCA GCAGCTCACGAGCAAAATGAAACTCGCCCAGGCCGCGCAGGAAGCATGGAGCGCCGTCACCAAGACCGCCACCGCCGTGC AGGGCGCGTTCAACGCCGTCATGGCCGCCACCGGCGGCCCCATCGTGTGGATAATCGGCCTCGTCGCCGCCATAGTCGCC GCATTGACATTGTTCTTCACCCAGACCGAGGTCAGCCGGCAATTATGGGCCGATTTCACCGGCTTCCTGCAGACAGCTTG GCAGAACATCACCGATTTCTTCCAGACCACGTGTCAGAACATCACGCAATGGTTCTCCAACGCGGCCGCGAACATTCAGA ACGGATGGAACGCGCTGACCGCGTTCATCGGTTCGGTTCCCGGCAGGATACAGGCGTTCTTCGCAGGCATCGGCCAATGG TTCGCAAACAAGTTCAACGAGGTCCGCAACGGCATAGCCAACGGCTTCAATTCGGCGGTCTCGTTCATCGCCTCCATACC GGGCCGCATCCTCAGCGCGCTCGGCAATCTCGGAGGCCTGCTGTGGAACGCGGGCGCAAGCATCATGCAGGGCTTCCTCG ACGGTCTGAAAAGCATCTGGCACAACATCACGAGCTTTGTGGGCAATATCGCCGGCTGGATCGCCGATCACAAGGGCCCG CTCCCCTACGACCGCAAGCTGCTGATTCCCGCCGGCGAGGCGATCATGGGCGGTTTCCGCAAGAGTCTGAACGCCGGCTG GCAGCAGGTGCAGGCGGACATCATGGGCATGAACGTGGGACTTTCCAACGGGTTCAAGACCCCGGCCTACGTGTATGGCG GTTCCGGCATGGACTACACGCCCAACACCGGTTCCGCGTCGAACGTGCATATCACGAACTACTATCCGCAGGCCGACCCG TGGCCCCTGTCCACGAACGACAGTCTCGACAAAATGACCGTAGGCATCTGA
Upstream 100 bases:
>100_bases CCTCGACCAGCTCGAGGCGTTCATGAGAATTGACTTCACCGACAGGCCCGACGAGCTCGTCGTGCACCGCGAATAACCGA ACAGAGAAAGGCATAGGACC
Downstream 100 bases:
>100_bases ATGAGGAGGCGTATATGGCCGGTGTCGGCTACGCGTTGAACGGCGTCGCCCTGGATTCGCGGTACTGCCGGGTCACGCTC GGCAGCACCCTGTTCGCCGG
Product: phage tape measure protein
Products: NA
Alternate protein names: Minor Tail -Like Protein; Minor Capsid Protein; Prophage LambdaSa1 PblA Protein InteRNAl Deletion; Phage Related Protein Minor Tail Protein; TMP Repeat Family; Tape Measure Protein; Phage Minor Tail Protein; Phage Tail Tape Measure Protein; Truncated Phage Protein; Phage Protein; Phage Tail Protein; Mu-Like Phage Minor Tail Protein
Number of amino acids: Translated: 736; Mature: 735
Protein sequence:
>736_residues MAYQLAQAYVQIVPSMKGVGKAIESAFAGPSKSVGQKAGDTAGGGFSRGFSAKLGMISGIAQSVAGTVIQGFAGLSSQIV EASDSTQKFASTLGFAGVSDAEIRKLTKSTQDYADKTVFGLSDIRNTTAQLAANGVPNYDKLAEAAGNLTAVAGGGADAF KSVAMVLTQTAGAGKLTTENWNQLSDAIPGASGKLQQAMLQNGAYTGNFRDAMANGEITADEFNQALMQLGMSDTAIQAA TSASTMEGAMGNLEASAVKLGSTMLDSVKPALTGFIGWASDGISAATPVIQAGIQGVIGWMQDLWKALNDNGAVTAFKSA WNAIRNAIMGVVNMVIDWSKLAPPDTLANAIKLVADALNWFVQHGNTLIPIIIGIGTAFAAVKGYQALNNGLTALTNTMN TVTTAAQGVSKGVMLMMDMGGPIAAIQQLTSKMKLAQAAQEAWSAVTKTATAVQGAFNAVMAATGGPIVWIIGLVAAIVA ALTLFFTQTEVSRQLWADFTGFLQTAWQNITDFFQTTCQNITQWFSNAAANIQNGWNALTAFIGSVPGRIQAFFAGIGQW FANKFNEVRNGIANGFNSAVSFIASIPGRILSALGNLGGLLWNAGASIMQGFLDGLKSIWHNITSFVGNIAGWIADHKGP LPYDRKLLIPAGEAIMGGFRKSLNAGWQQVQADIMGMNVGLSNGFKTPAYVYGGSGMDYTPNTGSASNVHITNYYPQADP WPLSTNDSLDKMTVGI
Sequences:
>Translated_736_residues MAYQLAQAYVQIVPSMKGVGKAIESAFAGPSKSVGQKAGDTAGGGFSRGFSAKLGMISGIAQSVAGTVIQGFAGLSSQIV EASDSTQKFASTLGFAGVSDAEIRKLTKSTQDYADKTVFGLSDIRNTTAQLAANGVPNYDKLAEAAGNLTAVAGGGADAF KSVAMVLTQTAGAGKLTTENWNQLSDAIPGASGKLQQAMLQNGAYTGNFRDAMANGEITADEFNQALMQLGMSDTAIQAA TSASTMEGAMGNLEASAVKLGSTMLDSVKPALTGFIGWASDGISAATPVIQAGIQGVIGWMQDLWKALNDNGAVTAFKSA WNAIRNAIMGVVNMVIDWSKLAPPDTLANAIKLVADALNWFVQHGNTLIPIIIGIGTAFAAVKGYQALNNGLTALTNTMN TVTTAAQGVSKGVMLMMDMGGPIAAIQQLTSKMKLAQAAQEAWSAVTKTATAVQGAFNAVMAATGGPIVWIIGLVAAIVA ALTLFFTQTEVSRQLWADFTGFLQTAWQNITDFFQTTCQNITQWFSNAAANIQNGWNALTAFIGSVPGRIQAFFAGIGQW FANKFNEVRNGIANGFNSAVSFIASIPGRILSALGNLGGLLWNAGASIMQGFLDGLKSIWHNITSFVGNIAGWIADHKGP LPYDRKLLIPAGEAIMGGFRKSLNAGWQQVQADIMGMNVGLSNGFKTPAYVYGGSGMDYTPNTGSASNVHITNYYPQADP WPLSTNDSLDKMTVGI >Mature_735_residues AYQLAQAYVQIVPSMKGVGKAIESAFAGPSKSVGQKAGDTAGGGFSRGFSAKLGMISGIAQSVAGTVIQGFAGLSSQIVE ASDSTQKFASTLGFAGVSDAEIRKLTKSTQDYADKTVFGLSDIRNTTAQLAANGVPNYDKLAEAAGNLTAVAGGGADAFK SVAMVLTQTAGAGKLTTENWNQLSDAIPGASGKLQQAMLQNGAYTGNFRDAMANGEITADEFNQALMQLGMSDTAIQAAT SASTMEGAMGNLEASAVKLGSTMLDSVKPALTGFIGWASDGISAATPVIQAGIQGVIGWMQDLWKALNDNGAVTAFKSAW NAIRNAIMGVVNMVIDWSKLAPPDTLANAIKLVADALNWFVQHGNTLIPIIIGIGTAFAAVKGYQALNNGLTALTNTMNT VTTAAQGVSKGVMLMMDMGGPIAAIQQLTSKMKLAQAAQEAWSAVTKTATAVQGAFNAVMAATGGPIVWIIGLVAAIVAA LTLFFTQTEVSRQLWADFTGFLQTAWQNITDFFQTTCQNITQWFSNAAANIQNGWNALTAFIGSVPGRIQAFFAGIGQWF ANKFNEVRNGIANGFNSAVSFIASIPGRILSALGNLGGLLWNAGASIMQGFLDGLKSIWHNITSFVGNIAGWIADHKGPL PYDRKLLIPAGEAIMGGFRKSLNAGWQQVQADIMGMNVGLSNGFKTPAYVYGGSGMDYTPNTGSASNVHITNYYPQADPW PLSTNDSLDKMTVGI
Specific function: Unknown
COG id: COG5412
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76683; Mature: 76552
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQLAQAYVQIVPSMKGVGKAIESAFAGPSKSVGQKAGDTAGGGFSRGFSAKLGMISGI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AQSVAGTVIQGFAGLSSQIVEASDSTQKFASTLGFAGVSDAEIRKLTKSTQDYADKTVFG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LSDIRNTTAQLAANGVPNYDKLAEAAGNLTAVAGGGADAFKSVAMVLTQTAGAGKLTTEN HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH WNQLSDAIPGASGKLQQAMLQNGAYTGNFRDAMANGEITADEFNQALMQLGMSDTAIQAA HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH TSASTMEGAMGNLEASAVKLGSTMLDSVKPALTGFIGWASDGISAATPVIQAGIQGVIGW HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MQDLWKALNDNGAVTAFKSAWNAIRNAIMGVVNMVIDWSKLAPPDTLANAIKLVADALNW HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FVQHGNTLIPIIIGIGTAFAAVKGYQALNNGLTALTNTMNTVTTAAQGVSKGVMLMMDMG HHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC GPIAAIQQLTSKMKLAQAAQEAWSAVTKTATAVQGAFNAVMAATGGPIVWIIGLVAAIVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ALTLFFTQTEVSRQLWADFTGFLQTAWQNITDFFQTTCQNITQWFSNAAANIQNGWNALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFIGSVPGRIQAFFAGIGQWFANKFNEVRNGIANGFNSAVSFIASIPGRILSALGNLGGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWNAGASIMQGFLDGLKSIWHNITSFVGNIAGWIADHKGPLPYDRKLLIPAGEAIMGGFR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHH KSLNAGWQQVQADIMGMNVGLSNGFKTPAYVYGGSGMDYTPNTGSASNVHITNYYPQADP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCC WPLSTNDSLDKMTVGI CCCCCCCCCCHHCCCC >Mature Secondary Structure AYQLAQAYVQIVPSMKGVGKAIESAFAGPSKSVGQKAGDTAGGGFSRGFSAKLGMISGI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AQSVAGTVIQGFAGLSSQIVEASDSTQKFASTLGFAGVSDAEIRKLTKSTQDYADKTVFG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LSDIRNTTAQLAANGVPNYDKLAEAAGNLTAVAGGGADAFKSVAMVLTQTAGAGKLTTEN HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH WNQLSDAIPGASGKLQQAMLQNGAYTGNFRDAMANGEITADEFNQALMQLGMSDTAIQAA HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH TSASTMEGAMGNLEASAVKLGSTMLDSVKPALTGFIGWASDGISAATPVIQAGIQGVIGW HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MQDLWKALNDNGAVTAFKSAWNAIRNAIMGVVNMVIDWSKLAPPDTLANAIKLVADALNW HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FVQHGNTLIPIIIGIGTAFAAVKGYQALNNGLTALTNTMNTVTTAAQGVSKGVMLMMDMG HHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC GPIAAIQQLTSKMKLAQAAQEAWSAVTKTATAVQGAFNAVMAATGGPIVWIIGLVAAIVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ALTLFFTQTEVSRQLWADFTGFLQTAWQNITDFFQTTCQNITQWFSNAAANIQNGWNALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFIGSVPGRIQAFFAGIGQWFANKFNEVRNGIANGFNSAVSFIASIPGRILSALGNLGGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWNAGASIMQGFLDGLKSIWHNITSFVGNIAGWIADHKGPLPYDRKLLIPAGEAIMGGFR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHH KSLNAGWQQVQADIMGMNVGLSNGFKTPAYVYGGSGMDYTPNTGSASNVHITNYYPQADP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCC WPLSTNDSLDKMTVGI CCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA