| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692648
Identifier: 213692648
GI number: 213692648
Start: 1957682
End: 1958920
Strand: Reverse
Name: 213692648
Synonym: Blon_1781
Alternate gene names: NA
Gene position: 1958920-1957682 (Counterclockwise)
Preceding gene: 213692649
Following gene: 213692647
Centisome position: 69.15
GC content: 59.16
Gene sequence:
>1239_bases ATGGACTACAAAAGCATCCGGCAGACCATCAACATGTCCCGGTCCACGGAGAAACCCACGGACGCCGCCCAACGCGAATA CGAGTCACGGGTCAACGGATGGTCCACGTTCCGTTCCGGAATCACGTTCGACGGACACGAGATGTTCGCCGTATGCTTCA GGGAACTCGGCACGGCCCTCGACACCGTGAGGGAACTCGAAGGAAGCGTCGAATCATTGTGGAACGACCTGCCGAACATC GCCAAACGGGCCTACCTGTTCGACCTCATCGGAGCCGAGGTGCAAAGCACCAACACCATCGAAGGCGTGCACACCACACG CAAGGAGATAGCCGACGCACTGGAATCGGCCGCGGGCGAGGGCCCCCACAAACGGCTGACCGAATTCGCGAAACTGTTCC TCGGACTGTCCGGAGAGGACGGCGAACAGCTCGAACTGCCCCACGAGCTCAAGGACATCAGGAACATCTACGACCAGGTC ACCGACGGCGAGATAGCCGACAAGGACAAACCGGACGGCATACTGTTCCGAAAGGGAACGGTCTCCGTGTGGGACGACGG CAACGGGCGCAAACTCCACGACGGCGCATACCCCGAATCGGAGATCCAGGTGCAACTCACCAAATGGATAACCCTGCTCA CCGACTCGAACATACCGCCGGTGCTCCGGGCCGTGATGTGCCACTACGCCTTCGAATACGTCCACCCGTTCTACGACGGC AACGGAAGGACGGGGCGATTCCTGCTGGCATTGCAGCTGAGCAAGCATCTGAGCGTGCCCACCGCGATATCGCTCAGCCC CGTCATAGCCGACGCCAAAGGTCAGTACTACAAGGCGTTCGACGACGCCCAGTTCCCGTTGAACTGCTCCGACGTGTCCC TGTTCTGCTACCGGATGGTGAAGTTCATCATCACCGCGCAGAAAAACATCATCTCCGATCTGGGGAACAAATGGGGCTCC CTGAAGGCCGCCTACGACAAGCTCAACGACTACGCCGAACAGAAACGCCTGTCCGGCGACCAGAAGGACATCCTGCTCTA CCTGCTTCAGATTGAACTGTTCGACAACAACCCGCAACCGGCATCTCGCAAGGAACTGTGCTCGTTTCTCGAAGCCGGGA ACACCAGGCTCATGAGCTCCATCAACGCGCTCCTCGGCCTCGGCCTCCTGCAGGAACACGGCAAACGGCCGATACGGTAT TCATTGTCAGAAACGGCCCACAGGCAATTCCTGCAATAG
Upstream 100 bases:
>100_bases TCCGATTGTCTATATATCGATTTCCGGCGTTTTCGATACATAGAAGAGTAATATTCGTATTCCAAACATCGATACAACGC GAAACGAGGTGATAGGAGAG
Downstream 100 bases:
>100_bases AAAAAAGAATCGCCCTGTTGATCTTGACCATCAACAGGGCGGGTGAAACATCGACCAGCTTGCTTATCAGAAAGGAGGAC GCTTCGTCTTTTATCCTACA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Bacterial Regulatory Protein; Fic Protein; Regulatory Protein; Transcriptional Regulator Fis Family; Fic Protein Family Phage Protein; Fic Protein Family Protein
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY SLSETAHRQFLQ
Sequences:
>Translated_412_residues MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY SLSETAHRQFLQ >Mature_412_residues MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY SLSETAHRQFLQ
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46414; Mature: 46414
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTAL CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DTVRELEGSVESLWNDLPNIAKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCC GPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQVTDGEIADKDKPDGILFRKGT CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCE VSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG EEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMV CCCCCCEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH KFIITAQKNIISDLGNKWGSLKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCC ASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRYSLSETAHRQFLQ CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCC >Mature Secondary Structure MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTAL CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DTVRELEGSVESLWNDLPNIAKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCC GPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQVTDGEIADKDKPDGILFRKGT CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCE VSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG EEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMV CCCCCCEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH KFIITAQKNIISDLGNKWGSLKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCC ASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRYSLSETAHRQFLQ CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA