Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692648

Identifier: 213692648

GI number: 213692648

Start: 1957682

End: 1958920

Strand: Reverse

Name: 213692648

Synonym: Blon_1781

Alternate gene names: NA

Gene position: 1958920-1957682 (Counterclockwise)

Preceding gene: 213692649

Following gene: 213692647

Centisome position: 69.15

GC content: 59.16

Gene sequence:

>1239_bases
ATGGACTACAAAAGCATCCGGCAGACCATCAACATGTCCCGGTCCACGGAGAAACCCACGGACGCCGCCCAACGCGAATA
CGAGTCACGGGTCAACGGATGGTCCACGTTCCGTTCCGGAATCACGTTCGACGGACACGAGATGTTCGCCGTATGCTTCA
GGGAACTCGGCACGGCCCTCGACACCGTGAGGGAACTCGAAGGAAGCGTCGAATCATTGTGGAACGACCTGCCGAACATC
GCCAAACGGGCCTACCTGTTCGACCTCATCGGAGCCGAGGTGCAAAGCACCAACACCATCGAAGGCGTGCACACCACACG
CAAGGAGATAGCCGACGCACTGGAATCGGCCGCGGGCGAGGGCCCCCACAAACGGCTGACCGAATTCGCGAAACTGTTCC
TCGGACTGTCCGGAGAGGACGGCGAACAGCTCGAACTGCCCCACGAGCTCAAGGACATCAGGAACATCTACGACCAGGTC
ACCGACGGCGAGATAGCCGACAAGGACAAACCGGACGGCATACTGTTCCGAAAGGGAACGGTCTCCGTGTGGGACGACGG
CAACGGGCGCAAACTCCACGACGGCGCATACCCCGAATCGGAGATCCAGGTGCAACTCACCAAATGGATAACCCTGCTCA
CCGACTCGAACATACCGCCGGTGCTCCGGGCCGTGATGTGCCACTACGCCTTCGAATACGTCCACCCGTTCTACGACGGC
AACGGAAGGACGGGGCGATTCCTGCTGGCATTGCAGCTGAGCAAGCATCTGAGCGTGCCCACCGCGATATCGCTCAGCCC
CGTCATAGCCGACGCCAAAGGTCAGTACTACAAGGCGTTCGACGACGCCCAGTTCCCGTTGAACTGCTCCGACGTGTCCC
TGTTCTGCTACCGGATGGTGAAGTTCATCATCACCGCGCAGAAAAACATCATCTCCGATCTGGGGAACAAATGGGGCTCC
CTGAAGGCCGCCTACGACAAGCTCAACGACTACGCCGAACAGAAACGCCTGTCCGGCGACCAGAAGGACATCCTGCTCTA
CCTGCTTCAGATTGAACTGTTCGACAACAACCCGCAACCGGCATCTCGCAAGGAACTGTGCTCGTTTCTCGAAGCCGGGA
ACACCAGGCTCATGAGCTCCATCAACGCGCTCCTCGGCCTCGGCCTCCTGCAGGAACACGGCAAACGGCCGATACGGTAT
TCATTGTCAGAAACGGCCCACAGGCAATTCCTGCAATAG

Upstream 100 bases:

>100_bases
TCCGATTGTCTATATATCGATTTCCGGCGTTTTCGATACATAGAAGAGTAATATTCGTATTCCAAACATCGATACAACGC
GAAACGAGGTGATAGGAGAG

Downstream 100 bases:

>100_bases
AAAAAAGAATCGCCCTGTTGATCTTGACCATCAACAGGGCGGGTGAAACATCGACCAGCTTGCTTATCAGAAAGGAGGAC
GCTTCGTCTTTTATCCTACA

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: Fic Family Protein; Bacterial Regulatory Protein; Fic Protein; Regulatory Protein; Transcriptional Regulator Fis Family; Fic Protein Family Phage Protein; Fic Protein Family Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI
AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV
TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG
NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS
LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY
SLSETAHRQFLQ

Sequences:

>Translated_412_residues
MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI
AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV
TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG
NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS
LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY
SLSETAHRQFLQ
>Mature_412_residues
MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTALDTVRELEGSVESLWNDLPNI
AKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGEGPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQV
TDGEIADKDKPDGILFRKGTVSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG
NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMVKFIITAQKNIISDLGNKWGS
LKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQPASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRY
SLSETAHRQFLQ

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46414; Mature: 46414

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTAL
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DTVRELEGSVESLWNDLPNIAKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQVTDGEIADKDKPDGILFRKGT
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCE
VSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG
EEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMV
CCCCCCEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH
KFIITAQKNIISDLGNKWGSLKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCC
ASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRYSLSETAHRQFLQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCC
>Mature Secondary Structure
MDYKSIRQTINMSRSTEKPTDAAQREYESRVNGWSTFRSGITFDGHEMFAVCFRELGTAL
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DTVRELEGSVESLWNDLPNIAKRAYLFDLIGAEVQSTNTIEGVHTTRKEIADALESAAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GPHKRLTEFAKLFLGLSGEDGEQLELPHELKDIRNIYDQVTDGEIADKDKPDGILFRKGT
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCE
VSVWDDGNGRKLHDGAYPESEIQVQLTKWITLLTDSNIPPVLRAVMCHYAFEYVHPFYDG
EEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
NGRTGRFLLALQLSKHLSVPTAISLSPVIADAKGQYYKAFDDAQFPLNCSDVSLFCYRMV
CCCCCCEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH
KFIITAQKNIISDLGNKWGSLKAAYDKLNDYAEQKRLSGDQKDILLYLLQIELFDNNPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCC
ASRKELCSFLEAGNTRLMSSINALLGLGLLQEHGKRPIRYSLSETAHRQFLQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA